AT3G57700

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000327
Physical Location & Seq
Forward (+)
21384917 .. 21385939
1023 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G57700.1

Sequence Viewer

Length: 1023 bp
ATGTTGCGTCTGTTCAGAAAGAAGAAGAAGCAGAAGAAAGAAGAGGAGATCAATCTCCAGAAGAATGGGAGCTTACTGTTGGAAGAACTCATTGCAACTTCAGGAGGTATATACAATCCCATCCGTACGTTTTCTTCCGACCAAATCCTACAAGCTACAAATCACTTTGACTGGAACTACGTAATCTCTGAAGACAGATTCGTGTGGTACAAAGGCATGATTGAAAACAGACCCGTACTGATCAAGAAATTCCAAGACTGTTCTGTTTTCGACGCTGACAACTTTTACCGTGACATTGCTGTTTCATCTTTGATGAGTAGCCATAAGAATGTTCTCAAGCTCTTGGGGTGTTGTCTAGAGTTTCCTCGTCCGGTTCTCGTGTGTGAATATCCAGAACATGGAGCTCTAAACTGTATAAGATGTGGAAAAGAAGGCGTCCGGTCATTCCCTTGGAATGTAAGGTTGAGAATCGCCAAGGAGATTGCAGATGCTGTAGCGTATCTTCATACTGAATTCCCCAGGACTATAATCCATAGGGATTTAAAGCTTGCAAATATTTTCCTTGACGAGAATTGGTCCGCTAAGCTCTCTTCTTTCAGCCTCAGTATAGTGCTTCCAGAGGGTGAAACTGGCGTAAATGACATGGTTTGCAGGACATCAAGCTATATCGAGCCTGATTACTTTAATACAGGTTTGGTCACCGAGAATGTCGACATCTATAGTCTTGGGATCATCATGCTAATTATTTTGACAGGAAAGTCTGAATACAATTCAGAAGTCGCTGTTTATCTTCCTGTATTGCCTGTCTATGTTGGGAAGTTTCTGGAGCGAGGTTTGTTGACTGAACTCATAGACCCGTCGATATTGGACAGCACGAGTGATGACATTCCCAAGCATTCAAGACTGCAAATGGAAGCGTTCATTGAGCTTGCTTTTAGATGTGTAAGATTCAGACCAGGAGAGAACGTGCCTCGCATGATAGACGTTGCAAAAGAGCTTAAGAAGATAGAGAAACATATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

340

Amino Acids

39.05

Weight (kDa)

6.42

Isoelectric Point (pI)

42.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 75 - 257 2.3e-22 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 77 - 257 4.5e-26 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 757
AccB7I CCANNNNNTGG 1 cut(s) 398
AccI GTMKAC 1 cut(s) 711
AciI CCGC 1 cut(s) 579
AclWI GGATC 1 cut(s) 737
AcsI RAATTY 2 cut(s) 248, 512
AcuI CTGAAG 2 cut(s) 84, 210
AcyI GRCGYC 1 cut(s) 435
AfaI GTAC 3 cut(s) 127, 209, 237
AfiI CCNNNNNNNGG 1 cut(s) 398
AflII CTTAAG 1 cut(s) 998
AgsI TTSAA 2 cut(s) 224, 900
AjnI CCWGG 2 cut(s) 518, 955
AluBI AGCT 9 cut(s) 72, 155, 340, 404, 547, 586, 663, 928, 997
AluI AGCT 9 cut(s) 72, 155, 340, 404, 547, 586, 663, 928, 997
Alw21I GWGCWC 1 cut(s) 406
AlwI GGATC 1 cut(s) 737
AlwNI CAGNNNCTG 1 cut(s) 491
ApoI RAATTY 2 cut(s) 248, 512
AspS9I GGNCC 1 cut(s) 576
AsuHPI GGTGA 2 cut(s) 635, 691
AvaII GGWCC 1 cut(s) 576
BanII GRGCYC 1 cut(s) 406
BarI GAAGNNNNNNTAC 4 cut(s) 118, 150, 486, 518
BauI CACGAG 2 cut(s) 377, 874
BbsI GAAGAC 1 cut(s) 198
Bbv12I GWGCWC 1 cut(s) 406
BccI CCATC 1 cut(s) 128
BciT130I CCWGG 2 cut(s) 520, 957
BclI TGATCA 1 cut(s) 240
BfaI CTAG 1 cut(s) 356
BfmI CTRYAG 2 cut(s) 492, 718
BfrI CTTAAG 1 cut(s) 998
BlpI GCTNAGC 1 cut(s) 582
Bme1390I CCNGG 2 cut(s) 520, 957
Bme18I GGWCC 1 cut(s) 576
BmgT120I GGNCC 1 cut(s) 576
BmrFI CCNGG 2 cut(s) 520, 957
BmsI GCATC 1 cut(s) 478
BpiI GAAGAC 1 cut(s) 198
BpmI CTGGAG 2 cut(s) 41, 845
Bpu1102I GCTNAGC 1 cut(s) 582
BpuEI CTTGAG 1 cut(s) 320
BsaAI YACGTR 1 cut(s) 181
BsaHI GRCGYC 1 cut(s) 435
BsaJI CCNNGG 3 cut(s) 449, 474, 518
BsaWI WCCGGW 2 cut(s) 370, 438
BsaXI ACNNNNNCTCC 2 cut(s) 951, 981
Bsc4I CCNNNNNNNGG 1 cut(s) 398
Bse1I ACTGG 2 cut(s) 176, 634
Bse3DI GCAATG 2 cut(s) 90, 294
BseBI CCWGG 2 cut(s) 520, 957
BseDI CCNNGG 3 cut(s) 449, 474, 518
BseGI GGATG 1 cut(s) 120
BseLI CCNNNNNNNGG 1 cut(s) 398
BseMI GCAATG 2 cut(s) 90, 294
BseMII CTCAG 1 cut(s) 616
BseNI ACTGG 2 cut(s) 176, 634
BseRI GAGGAG 1 cut(s) 59
BsiHKAI GWGCWC 1 cut(s) 406
BsiSI CCGG 2 cut(s) 371, 439
BsiWI CGTACG 1 cut(s) 125
BslI CCNNNNNNNGG 1 cut(s) 398
BsmI GAATGC 1 cut(s) 895
Bsp1286I GDGCHC 1 cut(s) 406
Bsp143I GATC 3 cut(s) 48, 240, 729
Bsp1720I GCTNAGC 1 cut(s) 582
BspACI CCGC 1 cut(s) 579
BspCNI CTCAG 1 cut(s) 615
BspPI GGATC 1 cut(s) 737
BspTI CTTAAG 1 cut(s) 998
BsrDI GCAATG 2 cut(s) 90, 294
BsrI ACTGG 2 cut(s) 176, 634
BssECI CCNNGG 3 cut(s) 449, 474, 518
BssMI GATC 3 cut(s) 48, 240, 729
BssNI GRCGYC 1 cut(s) 435
BssSI CACGAG 2 cut(s) 377, 874
BssT1I CCWWGG 2 cut(s) 449, 474
Bst2BI CACGAG 2 cut(s) 377, 874
Bst2UI CCWGG 2 cut(s) 520, 957
Bst4CI ACNGT 4 cut(s) 78, 260, 290, 413
Bst6I CTCTTC 2 cut(s) 36, 595
BstACI GRCGYC 1 cut(s) 435
BstAFI CTTAAG 1 cut(s) 998
BstBAI YACGTR 1 cut(s) 181
BstC8I GCNNGC 2 cut(s) 549, 930
BstDEI CTNAG 2 cut(s) 582, 602
BstEII GGTNACC 1 cut(s) 697
BstF5I GGATG 1 cut(s) 120
BstKTI GATC 3 cut(s) 51, 243, 732
BstMBI GATC 3 cut(s) 48, 240, 729
BstNI CCWGG 2 cut(s) 520, 957
BstPI GGTNACC 1 cut(s) 697
BstSCI CCNGG 2 cut(s) 518, 955
BstSFI CTRYAG 2 cut(s) 492, 718
BstSNI TACGTA 1 cut(s) 181
BstV2I GAAGAC 1 cut(s) 198
BstXI CCANNNNNNTGG 1 cut(s) 65
BtsCI GGATG 1 cut(s) 120
Cac8I GCNNGC 2 cut(s) 549, 930
CaiI CAGNNNCTG 1 cut(s) 491
Cfr13I GGNCC 1 cut(s) 576
CseI GACGC 2 cut(s) 281, 424
Csp6I GTAC 3 cut(s) 126, 208, 236
CviAII CATG 5 cut(s) 217, 398, 643, 736, 976
CviQI GTAC 3 cut(s) 126, 208, 236
DdeI CTNAG 2 cut(s) 582, 602
DpnI GATC 3 cut(s) 50, 242, 731
DpnII GATC 3 cut(s) 48, 240, 729
DraI TTTAAA 1 cut(s) 543
DrdI GACNNNNNNGTC 1 cut(s) 757
DseDI GACNNNNNNGTC 1 cut(s) 757
Eam1104I CTCTTC 2 cut(s) 36, 595
EarI CTCTTC 2 cut(s) 36, 595
Ecl136II GAGCTC 1 cut(s) 404
Eco105I TACGTA 1 cut(s) 181
Eco130I CCWWGG 2 cut(s) 449, 474
Eco24I GRGCYC 1 cut(s) 406
Eco47I GGWCC 1 cut(s) 576
Eco53kI GAGCTC 1 cut(s) 404
Eco57I CTGAAG 2 cut(s) 84, 210
Eco91I GGTNACC 1 cut(s) 697
EcoICRI GAGCTC 1 cut(s) 404
EcoO65I GGTNACC 1 cut(s) 697
EcoRI GAATTC 1 cut(s) 512
EcoRII CCWGG 2 cut(s) 518, 955
EcoT14I CCWWGG 2 cut(s) 449, 474
EcoT38I GRGCYC 1 cut(s) 406
ErhI CCWWGG 2 cut(s) 449, 474
FaeI CATG 5 cut(s) 220, 401, 646, 739, 979
FatI CATG 5 cut(s) 216, 397, 642, 735, 975
FbaI TGATCA 1 cut(s) 240
FblI GTMKAC 1 cut(s) 711
FokI GGATG 1 cut(s) 107
FriOI GRGCYC 1 cut(s) 406
FspBI CTAG 1 cut(s) 356
GsuI CTGGAG 2 cut(s) 41, 845
HapII CCGG 2 cut(s) 371, 439
HgaI GACGC 2 cut(s) 281, 424
Hin1I GRCGYC 1 cut(s) 435
Hin1II CATG 5 cut(s) 220, 401, 646, 739, 979
HincII GTYRAC 2 cut(s) 712, 840
HindII GTYRAC 2 cut(s) 712, 840
HindIII AAGCTT 1 cut(s) 545
HinfI GANTC 3 cut(s) 198, 468, 948
HpaII CCGG 2 cut(s) 371, 439
HphI GGTGA 2 cut(s) 635, 691
Hpy166II GTNNAC 2 cut(s) 712, 840
Hpy188I TCNGA 6 cut(s) 17, 139, 190, 763, 775, 953
Hpy188III TCNNGA 8 cut(s) 58, 102, 244, 356, 392, 617, 824, 900
Hpy8I GTNNAC 2 cut(s) 712, 840
Hpy99I CGWCG 2 cut(s) 275, 862
HpyAV CCTTC 1 cut(s) 425
HpyCH4III ACNGT 4 cut(s) 78, 260, 290, 413
HpyCH4IV ACGT 4 cut(s) 128, 180, 966, 984
HpyCH4V TGCA 6 cut(s) 95, 485, 551, 651, 907, 989
HpyF3I CTNAG 2 cut(s) 582, 602
HpySE526I ACGT 4 cut(s) 128, 180, 966, 984
Hsp92I GRCGYC 1 cut(s) 435
Hsp92II CATG 5 cut(s) 220, 401, 646, 739, 979
Ksp22I TGATCA 1 cut(s) 240
Kzo9I GATC 3 cut(s) 48, 240, 729
LmnI GCTCC 3 cut(s) 69, 401, 826
LweI GCATC 1 cut(s) 478
MaeI CTAG 1 cut(s) 356
MaeII ACGT 4 cut(s) 128, 180, 966, 984
MaeIII GTNAC 2 cut(s) 290, 697
MalI GATC 3 cut(s) 50, 242, 731
MboI GATC 3 cut(s) 48, 240, 729
MhlI GDGCHC 1 cut(s) 406
MluCI AATT 5 cut(s) 248, 512, 571, 741, 769
MmeI TCCRAC 2 cut(s) 60, 162
MnlI CCTC 7 cut(s) 37, 98, 375, 611, 613, 824, 981
MseI TTAA 3 cut(s) 542, 684, 999
MslI CAYNNNNRTG 1 cut(s) 327
MspCI CTTAAG 1 cut(s) 998
MspI CCGG 2 cut(s) 371, 439
MspR9I CCNGG 2 cut(s) 520, 957
Mva1269I GAATGC 1 cut(s) 895
MvaI CCWGG 2 cut(s) 520, 957
NdeII GATC 3 cut(s) 48, 240, 729
NlaIII CATG 5 cut(s) 220, 401, 646, 739, 979
NmuCI GTSAC 2 cut(s) 290, 697
PctI GAATGC 1 cut(s) 895
PfeI GAWTC 3 cut(s) 198, 468, 948
Pfl23II CGTACG 1 cut(s) 125
PflMI CCANNNNNTGG 1 cut(s) 398
Ppu21I YACGTR 1 cut(s) 181
Psp124BI GAGCTC 1 cut(s) 406
Psp6I CCWGG 2 cut(s) 518, 955
PspEI GGTNACC 1 cut(s) 697
PspGI CCWGG 2 cut(s) 518, 955
PspLI CGTACG 1 cut(s) 125
PspPI GGNCC 1 cut(s) 576
PstNI CAGNNNCTG 1 cut(s) 491
RsaI GTAC 3 cut(s) 127, 209, 237
RsaNI GTAC 3 cut(s) 126, 208, 236
RseI CAYNNNNRTG 1 cut(s) 327
SacI GAGCTC 1 cut(s) 406
SalI GTCGAC 1 cut(s) 710
SaqAI TTAA 3 cut(s) 542, 684, 999
Sau3AI GATC 3 cut(s) 48, 240, 729
Sau96I GGNCC 1 cut(s) 576
ScrFI CCNGG 2 cut(s) 520, 957
SduI GDGCHC 1 cut(s) 406
SfaNI GCATC 1 cut(s) 478
SfcI CTRYAG 2 cut(s) 492, 718
SinI GGWCC 1 cut(s) 576
SmiMI CAYNNNNRTG 1 cut(s) 327
SmlI CTYRAG 2 cut(s) 335, 998
SmoI CTYRAG 2 cut(s) 335, 998
SnaBI TACGTA 1 cut(s) 181
Sse9I AATT 5 cut(s) 248, 512, 571, 741, 769
SsiI CCGC 1 cut(s) 579
SspI AATATT 1 cut(s) 556
SspMI CTAG 1 cut(s) 356
SstI GAGCTC 1 cut(s) 406
StyD4I CCNGG 2 cut(s) 518, 955
StyI CCWWGG 2 cut(s) 449, 474
TaaI ACNGT 4 cut(s) 78, 260, 290, 413
TaiI ACGT 4 cut(s) 131, 183, 969, 987
TaqI TCGA 4 cut(s) 270, 669, 711, 860
TasI AATT 5 cut(s) 248, 512, 571, 741, 769
TfiI GAWTC 3 cut(s) 198, 468, 948
Tru1I TTAA 3 cut(s) 542, 684, 999
Tru9I TTAA 3 cut(s) 542, 684, 999
TseFI GTSAC 2 cut(s) 290, 697
Tsp45I GTSAC 2 cut(s) 290, 697
TspDTI ATGAA 3 cut(s) 294, 494, 910
TspGWI ACGGA 1 cut(s) 113
Van91I CCANNNNNTGG 1 cut(s) 398
Vha464I CTTAAG 1 cut(s) 998
VpaK11BI GGWCC 1 cut(s) 576
XapI RAATTY 2 cut(s) 248, 512
XbaI TCTAGA 1 cut(s) 355
XmiI GTMKAC 1 cut(s) 711
XspI CTAG 1 cut(s) 356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.