RLG00000015149

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
62280966 .. 62281384
419 bp
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UTR
Exon/CDS
Intron
RLM00000015149

Sequence Viewer

Length: 327 bp
ATGAGGTACTTTTTGCTTCCATGTTTGAGAAAGGAGGGACAATATGCTAATAGATCATTCTCGGATAATGGAAGCAAATTGTTACAAGATCTCATTGCTTCTTGTGATGGCAAATCTAATCCTATTCGCCATTTCGCTGCTGTTGGACTCATCAGGGAAACCAATAACTTCCATCCGTCTTGCCTTATACAAGAGTGTCGTCCACACGCATTTAGGAGTTCTCTGGACAACCGATTGGTTATCATTAAGACCATGGAGGCAGCAGGTGAAGCTAGGGATGAAGCTATTCTTAACATTGTAATTTCAGTGAAGATTGCTCACTCATAA

Protein Analysis

109

Amino Acids

12.11

Weight (kDa)

8.82

Isoelectric Point (pI)

43.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 254
Acc36I ACCTGC 1 cut(s) 254
AfaI GTAC 1 cut(s) 8
AluBI AGCT 2 cut(s) 272, 284
AluI AGCT 2 cut(s) 272, 284
ApeKI GCWGC 2 cut(s) 137, 260
Asp700I GAANNNNTTC 1 cut(s) 285
AsuHPI GGTGA 1 cut(s) 278
BbvI GCAGC 2 cut(s) 124, 272
BccI CCATC 2 cut(s) 101, 180
BfaI CTAG 1 cut(s) 273
BfuAI ACCTGC 1 cut(s) 254
BglII AGATCT 1 cut(s) 88
BisI GCNGC 2 cut(s) 138, 261
BlsI GCNGC 2 cut(s) 139, 262
BsaJI CCNNGG 1 cut(s) 252
Bse3DI GCAATG 1 cut(s) 93
BseDI CCNNGG 1 cut(s) 252
BseGI GGATG 2 cut(s) 172, 283
BseMI GCAATG 1 cut(s) 93
BseXI GCAGC 2 cut(s) 124, 272
BslFI GGGAC 1 cut(s) 51
BsmFI GGGAC 1 cut(s) 51
Bsp143I GATC 2 cut(s) 53, 88
Bsp19I CCATGG 1 cut(s) 252
BspMI ACCTGC 1 cut(s) 254
BsrDI GCAATG 1 cut(s) 93
BssECI CCNNGG 1 cut(s) 252
BssMI GATC 2 cut(s) 53, 88
BssT1I CCWWGG 1 cut(s) 252
BstDSI CCRYGG 1 cut(s) 252
BstF5I GGATG 2 cut(s) 172, 283
BstKTI GATC 2 cut(s) 56, 91
BstMBI GATC 2 cut(s) 53, 88
BstMWI GCNNNNNNNGC 1 cut(s) 269
BstV1I GCAGC 2 cut(s) 124, 272
BstX2I RGATCY 1 cut(s) 88
BstYI RGATCY 1 cut(s) 88
BtgI CCRYGG 1 cut(s) 252
BtsCI GGATG 2 cut(s) 172, 283
BtsIMutI CAGTG 1 cut(s) 312
BveI ACCTGC 1 cut(s) 254
Csp6I GTAC 1 cut(s) 7
CviAII CATG 2 cut(s) 21, 253
CviJI RGCY 2 cut(s) 272, 284
CviKI_1 RGCY 2 cut(s) 272, 284
CviQI GTAC 1 cut(s) 7
DpnI GATC 2 cut(s) 55, 90
DpnII GATC 2 cut(s) 53, 88
Eco130I CCWWGG 1 cut(s) 252
EcoT14I CCWWGG 1 cut(s) 252
ErhI CCWWGG 1 cut(s) 252
FaeI CATG 2 cut(s) 24, 256
FaiI YATR 5 cut(s) 22, 45, 188, 254, 325
FalI AAGNNNNNCTT 2 cut(s) 273, 305
FaqI GGGAC 1 cut(s) 51
FatI CATG 2 cut(s) 20, 252
Fnu4HI GCNGC 2 cut(s) 138, 261
FokI GGATG 2 cut(s) 159, 290
Fsp4HI GCNGC 2 cut(s) 138, 261
FspBI CTAG 1 cut(s) 273
GluI GCNGC 2 cut(s) 138, 261
Hin1II CATG 2 cut(s) 24, 256
HinfI GANTC 1 cut(s) 147
HphI GGTGA 1 cut(s) 278
Hpy166II GTNNAC 1 cut(s) 203
Hpy188I TCNGA 1 cut(s) 64
Hpy188III TCNNGA 1 cut(s) 224
Hpy8I GTNNAC 1 cut(s) 203
HpyF10VI GCNNNNNNNGC 1 cut(s) 269
Hsp92II CATG 2 cut(s) 24, 256
Kzo9I GATC 2 cut(s) 53, 88
LpnPI CCDG 3 cut(s) 139, 209, 249
Lsp1109I GCAGC 2 cut(s) 124, 272
MaeI CTAG 1 cut(s) 273
MaeIII GTNAC 1 cut(s) 81
MalI GATC 2 cut(s) 55, 90
MboI GATC 2 cut(s) 53, 88
MboII GAAGA 1 cut(s) 322
MflI RGATCY 1 cut(s) 88
MluCI AATT 2 cut(s) 77, 300
MlyI GAGTC 1 cut(s) 141
MmeI TCCRAC 1 cut(s) 124
MnlI CCTC 2 cut(s) 28, 250
MroXI GAANNNNTTC 1 cut(s) 285
MseI TTAA 2 cut(s) 246, 291
MwoI GCNNNNNNNGC 1 cut(s) 269
NcoI CCATGG 1 cut(s) 252
NdeII GATC 2 cut(s) 53, 88
NlaIII CATG 2 cut(s) 24, 256
PaqCI CACCTGC 1 cut(s) 254
PdmI GAANNNNTTC 1 cut(s) 285
PkrI GCNGC 2 cut(s) 139, 262
PleI GAGTC 1 cut(s) 141
PpsI GAGTC 1 cut(s) 141
PsuI RGATCY 1 cut(s) 88
RsaI GTAC 1 cut(s) 8
RsaNI GTAC 1 cut(s) 7
SaqAI TTAA 2 cut(s) 246, 291
SatI GCNGC 2 cut(s) 138, 261
Sau3AI GATC 2 cut(s) 53, 88
SchI GAGTC 1 cut(s) 141
SetI ASST 4 cut(s) 8, 268, 274, 286
Sse9I AATT 2 cut(s) 77, 300
SspMI CTAG 1 cut(s) 273
StyI CCWWGG 1 cut(s) 252
TasI AATT 2 cut(s) 77, 300
Tru1I TTAA 2 cut(s) 246, 291
Tru9I TTAA 2 cut(s) 246, 291
TscAI CASTG 1 cut(s) 312
TseI GCWGC 2 cut(s) 137, 260
TspDTI ATGAA 1 cut(s) 294
TspGWI ACGGA 1 cut(s) 165
TspRI CASTG 1 cut(s) 312
XmnI GAANNNNTTC 1 cut(s) 285
XspI CTAG 1 cut(s) 273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.