RLG00000014108

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
47407223 .. 47408901
1679 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014108

Sequence Viewer

Length: 891 bp
ATGGACGAAAGGGGTAGAGCATTCTTCAACAACGGAAGCATCTTGTTAGAGGATCTCATTGCTTCTTGTGATGGAAAATCTAATCCTATTCGCAATTACTCTGCTTCTGAGCTCATCAGGGCCACCAACAATTTTGATCCTTCCCGCATCATACAAAATTGTACTCCTACTGAGGCTAGTCAATTTCATCGTTTTATACATGTTTACCATGGTTACAAAGTGTTCAAGGGTTTTCTAGACGATCGATATATCATTGTTAAGAAGTTCATGGGGACCGGGGATGAAACTAGGTCCCTGGCTATTCGGGACATTATCGTTTCAATGCAAATGAGCAACCATAAGAATGTCTTGAAGCTCTTGGTGTGCTGTTTAGAGTTCCCTATACCAGCTCTGGTGCATGAATATGTAACAAAAGGAGTTGTCACTTATCAAGGAGGTTTCGGGGCCAATGAGTCCTTGCCCTGGAAAGTTAGATTGCGTATTGCAAAGCAGCTTGCAAATGCACTTACATATCTTCATACCGCCTTTCCAAGGCCTATCATTCACAGGGACCTGAAACCCAACTGCATTTTTTTGGATGAGGACTATGTCCCCAAACTCTGCAACTTCTCACTGTCCATAACTATACCTCCTAAGCAATCGTATGCTGAAGATAACCCGAAAGGGACATTTGGTTATGTTGATCCTACCTACATGAGGTCTGGTTACATTTCGGAAAAAGGTGATGTTTACAGCTTTGGTGTTCTATTACTTGTGTTCTTGACGGGACAAGAAGCTTTGATTAGATATGAAGAGGGAGGAGAGTATCAGTCAATTATTCCATATGTGAAATCTCATGCTTGTGATGGCCAGATTGAGACAATAGTGGATCCTGAAACGGATCTCAGGTGA

Protein Analysis

297

Amino Acids

33.58

Weight (kDa)

6.45

Isoelectric Point (pI)

32.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 65 - 259 2.1e-21 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 74 - 267 2.1e-23 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 145, 522
AclWI GGATC 6 cut(s) 60, 131, 677, 863, 876, 888
AcoI YGGCCR 1 cut(s) 847
AcuI CTGAAG 1 cut(s) 669
AfaI GTAC 1 cut(s) 163
AfiI CCNNNNNNNGG 3 cut(s) 462, 531, 696
AflIII ACRYGT 1 cut(s) 199
AgsI TTSAA 4 cut(s) 28, 226, 321, 352
AjnI CCWGG 2 cut(s) 294, 461
AluBI AGCT 6 cut(s) 112, 355, 389, 493, 735, 776
AluI AGCT 6 cut(s) 112, 355, 389, 493, 735, 776
Alw21I GWGCWC 1 cut(s) 114
Alw26I GTCTC 1 cut(s) 851
AlwI GGATC 6 cut(s) 60, 131, 677, 863, 876, 888
AoxI GGCC 4 cut(s) 120, 444, 533, 847
ApeKI GCWGC 1 cut(s) 490
AspS9I GGNCC 5 cut(s) 120, 273, 291, 444, 550
AsuC2I CCSGG 1 cut(s) 277
AsuHPI GGTGA 1 cut(s) 734
AvaII GGWCC 3 cut(s) 273, 291, 550
BalI TGGCCA 1 cut(s) 849
BamHI GGATCC 1 cut(s) 868
BanII GRGCYC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 114
BbvI GCAGC 1 cut(s) 502
BccI CCATC 2 cut(s) 65, 839
BciT130I CCWGG 2 cut(s) 296, 463
BcnI CCSGG 1 cut(s) 277
BcoDI GTCTC 1 cut(s) 851
BfaI CTAG 3 cut(s) 177, 236, 288
BisI GCNGC 1 cut(s) 491
BlsI GCNGC 1 cut(s) 492
Bme1390I CCNGG 3 cut(s) 277, 296, 463
Bme18I GGWCC 3 cut(s) 273, 291, 550
BmgT120I GGNCC 5 cut(s) 120, 273, 291, 444, 550
BmiI GGNNCC 5 cut(s) 274, 293, 445, 551, 870
BmrFI CCNGG 3 cut(s) 277, 296, 463
BmsI GCATC 2 cut(s) 48, 156
Bpu10I CCTNAGC 1 cut(s) 633
BpuMI CCSGG 1 cut(s) 277
Bsa29I ATCGAT 1 cut(s) 244
BsaJI CCNNGG 5 cut(s) 208, 276, 294, 461, 530
BsaXI ACNNNNNCTCC 2 cut(s) 613, 643
Bsc4I CCNNNNNNNGG 3 cut(s) 462, 531, 696
Bse3DI GCAATG 1 cut(s) 57
BseBI CCWGG 2 cut(s) 296, 463
BseCI ATCGAT 1 cut(s) 244
BseDI CCNNGG 5 cut(s) 208, 276, 294, 461, 530
BseGI GGATG 2 cut(s) 286, 583
BseLI CCNNNNNNNGG 3 cut(s) 462, 531, 696
BseMI GCAATG 1 cut(s) 57
BseMII CTCAG 2 cut(s) 99, 162
BseRI GAGGAG 1 cut(s) 813
BseXI GCAGC 1 cut(s) 502
Bsh1285I CGRYCG 1 cut(s) 244
BshFI GGCC 4 cut(s) 122, 446, 535, 849
BshVI ATCGAT 1 cut(s) 244
BsiEI CGRYCG 1 cut(s) 244
BsiHKAI GWGCWC 1 cut(s) 114
BsiSI CCGG 1 cut(s) 276
BslFI GGGAC 7 cut(s) 277, 286, 320, 563, 575, 679, 780
BslI CCNNNNNNNGG 3 cut(s) 462, 531, 696
BsmAI GTCTC 1 cut(s) 851
BsmFI GGGAC 7 cut(s) 277, 286, 320, 563, 575, 679, 780
BsmI GAATGC 1 cut(s) 20
BsnI GGCC 4 cut(s) 122, 446, 535, 849
Bsp1286I GDGCHC 1 cut(s) 114
Bsp143I GATC 6 cut(s) 52, 136, 241, 682, 868, 880
Bsp19I CCATGG 1 cut(s) 208
BspACI CCGC 2 cut(s) 145, 522
BspANI GGCC 4 cut(s) 122, 446, 535, 849
BspCNI CTCAG 2 cut(s) 100, 163
BspDI ATCGAT 1 cut(s) 244
BspLI GGNNCC 5 cut(s) 274, 293, 445, 551, 870
BspPI GGATC 6 cut(s) 60, 131, 677, 863, 876, 888
BsrDI GCAATG 1 cut(s) 57
BssECI CCNNGG 5 cut(s) 208, 276, 294, 461, 530
BssMI GATC 6 cut(s) 52, 136, 241, 682, 868, 880
BssT1I CCWWGG 2 cut(s) 208, 530
Bst2UI CCWGG 2 cut(s) 296, 463
Bst4CI ACNGT 1 cut(s) 615
Bst6I CTCTTC 1 cut(s) 786
BstC8I GCNNGC 1 cut(s) 495
BstDEI CTNAG 4 cut(s) 108, 171, 633, 884
BstDSI CCRYGG 1 cut(s) 208
BstENI CCTNNNNNAGG 2 cut(s) 529, 694
BstF5I GGATG 2 cut(s) 286, 583
BstKTI GATC 6 cut(s) 55, 139, 244, 685, 871, 883
BstMAI GTCTC 1 cut(s) 851
BstMBI GATC 6 cut(s) 52, 136, 241, 682, 868, 880
BstMCI CGRYCG 1 cut(s) 244
BstNI CCWGG 2 cut(s) 296, 463
BstNSI RCATGY 1 cut(s) 203
BstSCI CCNGG 3 cut(s) 275, 294, 461
BstV1I GCAGC 1 cut(s) 502
BstX2I RGATCY 3 cut(s) 52, 868, 880
BstYI RGATCY 3 cut(s) 52, 868, 880
Bsu15I ATCGAT 1 cut(s) 244
BsuRI GGCC 4 cut(s) 122, 446, 535, 849
BsuTUI ATCGAT 1 cut(s) 244
BtgI CCRYGG 1 cut(s) 208
BtsCI GGATG 2 cut(s) 286, 583
BtsIMutI CAGTG 1 cut(s) 611
Cac8I GCNNGC 1 cut(s) 495
Cfr13I GGNCC 5 cut(s) 120, 273, 291, 444, 550
ClaI ATCGAT 1 cut(s) 244
Csp6I GTAC 1 cut(s) 162
CviAII CATG 6 cut(s) 200, 209, 268, 398, 694, 836
CviQI GTAC 1 cut(s) 162
DdeI CTNAG 4 cut(s) 108, 171, 633, 884
DpnI GATC 6 cut(s) 54, 138, 243, 684, 870, 882
DpnII GATC 6 cut(s) 52, 136, 241, 682, 868, 880
EaeI YGGCCR 1 cut(s) 847
Eam1104I CTCTTC 1 cut(s) 786
EarI CTCTTC 1 cut(s) 786
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 2 cut(s) 208, 530
Eco147I AGGCCT 1 cut(s) 535
Eco24I GRGCYC 1 cut(s) 114
Eco47I GGWCC 3 cut(s) 273, 291, 550
Eco53kI GAGCTC 1 cut(s) 112
Eco57I CTGAAG 1 cut(s) 669
EcoICRI GAGCTC 1 cut(s) 112
EcoNI CCTNNNNNAGG 2 cut(s) 529, 694
EcoO109I RGGNCCY 2 cut(s) 291, 550
EcoRII CCWGG 2 cut(s) 294, 461
EcoT14I CCWWGG 2 cut(s) 208, 530
EcoT38I GRGCYC 1 cut(s) 114
ErhI CCWWGG 2 cut(s) 208, 530
FaeI CATG 6 cut(s) 203, 212, 271, 401, 697, 839
FalI AAGNNNNNCTT 2 cut(s) 332, 364
FaqI GGGAC 7 cut(s) 277, 286, 320, 563, 575, 679, 780
FatI CATG 6 cut(s) 199, 208, 267, 397, 693, 835
FauI CCCGC 1 cut(s) 152
FauNDI CATATG 1 cut(s) 823
Fnu4HI GCNGC 1 cut(s) 491
FokI GGATG 2 cut(s) 293, 590
FriOI GRGCYC 1 cut(s) 114
Fsp4HI GCNGC 1 cut(s) 491
FspBI CTAG 3 cut(s) 177, 236, 288
GluI GCNGC 1 cut(s) 491
HaeIII GGCC 4 cut(s) 122, 446, 535, 849
HapII CCGG 1 cut(s) 276
Hin1II CATG 6 cut(s) 203, 212, 271, 401, 697, 839
HindIII AAGCTT 1 cut(s) 774
HinfI GANTC 1 cut(s) 452
HpaII CCGG 1 cut(s) 276
HphI GGTGA 1 cut(s) 734
Hpy166II GTNNAC 2 cut(s) 205, 730
Hpy188I TCNGA 2 cut(s) 109, 715
Hpy188III TCNNGA 5 cut(s) 236, 305, 349, 760, 872
Hpy8I GTNNAC 2 cut(s) 205, 730
HpyAV CCTTC 1 cut(s) 150
HpyCH4III ACNGT 1 cut(s) 615
HpyCH4V TGCA 7 cut(s) 325, 397, 485, 497, 503, 567, 603
HpyF3I CTNAG 4 cut(s) 108, 171, 633, 884
Hsp92II CATG 6 cut(s) 203, 212, 271, 401, 697, 839
Kzo9I GATC 6 cut(s) 52, 136, 241, 682, 868, 880
Lsp1109I GCAGC 1 cut(s) 502
LweI GCATC 2 cut(s) 48, 156
MaeI CTAG 3 cut(s) 177, 236, 288
MaeIII GTNAC 4 cut(s) 212, 406, 421, 704
MalI GATC 6 cut(s) 54, 138, 243, 684, 870, 882
MboI GATC 6 cut(s) 52, 136, 241, 682, 868, 880
MboII GAAGA 4 cut(s) 16, 506, 662, 803
MflI RGATCY 3 cut(s) 52, 868, 880
MhlI GDGCHC 1 cut(s) 114
MlsI TGGCCA 1 cut(s) 849
MluCI AATT 5 cut(s) 94, 130, 157, 182, 813
MluNI TGGCCA 1 cut(s) 849
MlyI GAGTC 1 cut(s) 461
MnlI CCTC 8 cut(s) 43, 166, 428, 574, 639, 690, 787, 791
Mox20I TGGCCA 1 cut(s) 849
MscI TGGCCA 1 cut(s) 849
MseI TTAA 1 cut(s) 258
MslI CAYNNNNRTG 3 cut(s) 342, 402, 840
Msp20I TGGCCA 1 cut(s) 849
MspI CCGG 1 cut(s) 276
MspR9I CCNGG 3 cut(s) 277, 296, 463
Mva1269I GAATGC 1 cut(s) 20
MvaI CCWGG 2 cut(s) 296, 463
NciI CCSGG 1 cut(s) 277
NcoI CCATGG 1 cut(s) 208
NdeI CATATG 1 cut(s) 823
NdeII GATC 6 cut(s) 52, 136, 241, 682, 868, 880
NlaIII CATG 6 cut(s) 203, 212, 271, 401, 697, 839
NlaIV GGNNCC 5 cut(s) 274, 293, 445, 551, 870
NmuCI GTSAC 1 cut(s) 421
NspI RCATGY 1 cut(s) 203
PceI AGGCCT 1 cut(s) 535
PciI ACATGT 1 cut(s) 199
PctI GAATGC 1 cut(s) 20
PflFI GACNNNGTC 1 cut(s) 587
PkrI GCNGC 1 cut(s) 492
Ple19I CGATCG 1 cut(s) 244
PleI GAGTC 1 cut(s) 460
PpsI GAGTC 1 cut(s) 460
PpuMI RGGWCCY 2 cut(s) 291, 550
PscI ACATGT 1 cut(s) 199
Psp124BI GAGCTC 1 cut(s) 114
Psp5II RGGWCCY 2 cut(s) 291, 550
Psp6I CCWGG 2 cut(s) 294, 461
PspGI CCWGG 2 cut(s) 294, 461
PspN4I GGNNCC 5 cut(s) 274, 293, 445, 551, 870
PspPI GGNCC 5 cut(s) 120, 273, 291, 444, 550
PspPPI RGGWCCY 2 cut(s) 291, 550
PsuI RGATCY 3 cut(s) 52, 868, 880
PsyI GACNNNGTC 1 cut(s) 587
PvuI CGATCG 1 cut(s) 244
RsaI GTAC 1 cut(s) 163
RsaNI GTAC 1 cut(s) 162
RseI CAYNNNNRTG 3 cut(s) 342, 402, 840
SacI GAGCTC 1 cut(s) 114
SaqAI TTAA 1 cut(s) 258
SatI GCNGC 1 cut(s) 491
Sau3AI GATC 6 cut(s) 52, 136, 241, 682, 868, 880
Sau96I GGNCC 5 cut(s) 120, 273, 291, 444, 550
SchI GAGTC 1 cut(s) 461
ScrFI CCNGG 3 cut(s) 277, 296, 463
SduI GDGCHC 1 cut(s) 114
SfaNI GCATC 2 cut(s) 48, 156
SinI GGWCC 3 cut(s) 273, 291, 550
SmiMI CAYNNNNRTG 3 cut(s) 342, 402, 840
Sse9I AATT 5 cut(s) 94, 130, 157, 182, 813
SseBI AGGCCT 1 cut(s) 535
SsiI CCGC 2 cut(s) 145, 522
SspMI CTAG 3 cut(s) 177, 236, 288
SstI GAGCTC 1 cut(s) 114
StuI AGGCCT 1 cut(s) 535
StyD4I CCNGG 3 cut(s) 275, 294, 461
StyI CCWWGG 2 cut(s) 208, 530
TaaI ACNGT 1 cut(s) 615
TaqI TCGA 1 cut(s) 244
TasI AATT 5 cut(s) 94, 130, 157, 182, 813
TatI WGTACW 1 cut(s) 161
Tru1I TTAA 1 cut(s) 258
Tru9I TTAA 1 cut(s) 258
TscAI CASTG 1 cut(s) 618
TseFI GTSAC 1 cut(s) 421
TseI GCWGC 1 cut(s) 490
Tsp45I GTSAC 1 cut(s) 421
TspDTI ATGAA 6 cut(s) 176, 256, 297, 414, 506, 804
TspGWI ACGGA 1 cut(s) 48
TspRI CASTG 1 cut(s) 618
Tth111I GACNNNGTC 1 cut(s) 587
VpaK11BI GGWCC 3 cut(s) 273, 291, 550
XagI CCTNNNNNAGG 2 cut(s) 529, 694
XbaI TCTAGA 1 cut(s) 235
XceI RCATGY 1 cut(s) 203
XspI CTAG 3 cut(s) 177, 236, 288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.