Rw7G012270

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
11610038 .. 11611096
1059 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G012270.1

Sequence Viewer

Length: 1059 bp
ATGTGTATCAGGTTTTCACTGCTTCCATGTTTAAGGACAGAGGAGAGAGATACTGGTATTGTATCATCATCAATGTTCTTGGAGAATGGAAGCAAATTATTAGAAGATCTCATTGCTTCATGTGATGGAAAGTCTAATCCAATTCGTTGTTATTCTCTTGATGAACTCACAAGGGCAACCAACAACTTTGATCCTTCTTGCATTATACAAGACTTTTCGGCGGAATTTCGTTACCAAATGTTTAATGGTTTTCTAGATGACCGATCAATTACCATTAAGAAGTTTATGAGTACTGCCCAAGTTGGGTATGAAGCTAGGTCTCTGGCCATTCGTGACATTATAATAACAATGCAGATGAGCAGTCATAACAATGTCTTAAAGCTGTTGGGCTGCTGCTTAGAGCTCCCTATACCGGCTCTAGTGCTTGAATGTGCAAGTGAAGGAATTCTAACTAGTGAAGCGGGTTGTGGAGCAAATCAATCCCTACCATGGAATATTAGGCTGCGCATTGCAAAGCAACTTGCAAATGCAATTACATATCTGCATACTGCCTTCTCCCGGCCAATTATTCATAGAGATATACGAGCCTCCTGTGTTTTCTTGGGCAATGATTATATTCCGAAGCTTTGCAACTTCTCACTTTCCATAACCATTCCTCCTATGCAATCGCATGTTGTAGATGAGCCAAAAGGGACATATGGGTACCTTGACCCTGCCTACATGAGGTCTGGTTACATTTCAGAAAAGACTGATATTTATAGCTTCGGTGTGCTTTTACTTATATTGTTGACAGGCCAAAAAGTTGTGCTTCAACATCAAGAAGAATTTGAGTCGATTATTTCATATGTGAAACGTCATGCTAGTGATGGTCAGATTCAGACGGTAGTAGATCCTAAAATCCTTGGAGAGATGGGGGAAGATAAGCAAGCTCAAGAGCAGTTGCATTTATTCCTAGCACTGGCATTGTCATGTACCCAAGATGAAAGTGAAGCAAGGCCAGATATGATTGATGTGGCTAAAGAACTGATACTTATTGAGAAGTCTGTCCTGCTTCGCTAG

Protein Analysis

352

Amino Acids

39.44

Weight (kDa)

5.27

Isoelectric Point (pI)

43.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 89 - 284 7.6e-22 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 108 - 284 3.8e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 341
Acc16I TGCGCA 1 cut(s) 506
Acc65I GGTACC 1 cut(s) 702
AccB1I GGYRCC 1 cut(s) 702
AciI CCGC 2 cut(s) 221, 461
AclWI GGATC 2 cut(s) 185, 884
AcoI YGGCCR 2 cut(s) 324, 560
AcsI RAATTY 3 cut(s) 224, 444, 824
AfaI GTAC 3 cut(s) 292, 704, 973
AfiI CCNNNNNNNGG 6 cut(s) 303, 412, 489, 558, 723, 958
AgsI TTSAA 2 cut(s) 428, 812
AhlI ACTAGT 1 cut(s) 452
AluBI AGCT 6 cut(s) 314, 382, 403, 625, 762, 929
AluI AGCT 6 cut(s) 314, 382, 403, 625, 762, 929
Alw21I GWGCWC 1 cut(s) 405
Alw26I GTCTC 1 cut(s) 324
AlwI GGATC 2 cut(s) 185, 884
AoxI GGCC 4 cut(s) 324, 560, 793, 995
ApeKI GCWGC 3 cut(s) 390, 393, 502
ApoI RAATTY 3 cut(s) 224, 444, 824
Asp700I GAANNNNTTC 1 cut(s) 444
Asp718I GGTACC 1 cut(s) 702
AspLEI GCGC 1 cut(s) 507
AsuC2I CCSGG 1 cut(s) 559
BalI TGGCCA 1 cut(s) 326
BanI GGYRCC 1 cut(s) 702
BanII GRGCYC 1 cut(s) 405
Bbv12I GWGCWC 1 cut(s) 405
BbvI GCAGC 3 cut(s) 377, 380, 489
BccI CCATC 3 cut(s) 119, 860, 904
BcnI CCSGG 1 cut(s) 559
BcoDI GTCTC 1 cut(s) 324
BcuI ACTAGT 1 cut(s) 452
BfaI CTAG 7 cut(s) 254, 315, 419, 453, 861, 953, 1057
BglII AGATCT 1 cut(s) 106
BisI GCNGC 3 cut(s) 391, 394, 503
BlsI GCNGC 3 cut(s) 392, 395, 504
BmcAI AGTACT 1 cut(s) 292
Bme1390I CCNGG 1 cut(s) 559
BmiI GGNNCC 1 cut(s) 704
BmrFI CCNGG 1 cut(s) 559
BpuEI CTTGAG 1 cut(s) 915
BpuMI CCSGG 1 cut(s) 559
BsaI GGTCTC 1 cut(s) 324
BsaJI CCNNGG 2 cut(s) 488, 901
BsaXI ACNNNNNCTCC 2 cut(s) 640, 670
Bsc4I CCNNNNNNNGG 6 cut(s) 303, 412, 489, 558, 723, 958
Bse118I RCCGGY 1 cut(s) 412
Bse1I ACTGG 2 cut(s) 58, 963
Bse3DI GCAATG 3 cut(s) 111, 507, 613
BseDI CCNNGG 2 cut(s) 488, 901
BseLI CCNNNNNNNGG 6 cut(s) 303, 412, 489, 558, 723, 958
BseMI GCAATG 3 cut(s) 111, 507, 613
BseNI ACTGG 2 cut(s) 58, 963
BseRI GAGGAG 1 cut(s) 56
BseXI GCAGC 3 cut(s) 377, 380, 489
BshFI GGCC 4 cut(s) 326, 562, 795, 997
BshNI GGYRCC 1 cut(s) 702
BsiHKAI GWGCWC 1 cut(s) 405
BsiSI CCGG 2 cut(s) 413, 559
BslFI GGGAC 1 cut(s) 706
BslI CCNNNNNNNGG 6 cut(s) 303, 412, 489, 558, 723, 958
BsmAI GTCTC 1 cut(s) 324
BsmFI GGGAC 1 cut(s) 706
BsnI GGCC 4 cut(s) 326, 562, 795, 997
Bso31I GGTCTC 1 cut(s) 324
Bsp1286I GDGCHC 1 cut(s) 405
Bsp143I GATC 4 cut(s) 106, 190, 263, 889
Bsp19I CCATGG 1 cut(s) 488
BspACI CCGC 2 cut(s) 221, 461
BspANI GGCC 4 cut(s) 326, 562, 795, 997
BspLI GGNNCC 1 cut(s) 704
BspPI GGATC 2 cut(s) 185, 884
BspT107I GGYRCC 1 cut(s) 702
BspTNI GGTCTC 1 cut(s) 324
BsrDI GCAATG 3 cut(s) 111, 507, 613
BsrFI RCCGGY 1 cut(s) 412
BsrI ACTGG 2 cut(s) 58, 963
BssAI RCCGGY 1 cut(s) 412
BssECI CCNNGG 2 cut(s) 488, 901
BssMI GATC 4 cut(s) 106, 190, 263, 889
BssT1I CCWWGG 2 cut(s) 488, 901
Bst4CI ACNGT 1 cut(s) 883
BstC8I GCNNGC 1 cut(s) 927
BstDEI CTNAG 1 cut(s) 397
BstDSI CCRYGG 1 cut(s) 488
BstENI CCTNNNNNAGG 1 cut(s) 721
BstHHI GCGC 1 cut(s) 507
BstKTI GATC 4 cut(s) 109, 193, 266, 892
BstMAI GTCTC 1 cut(s) 324
BstMBI GATC 4 cut(s) 106, 190, 263, 889
BstNSI RCATGY 1 cut(s) 674
BstSCI CCNGG 1 cut(s) 557
BstV1I GCAGC 3 cut(s) 377, 380, 489
BstX2I RGATCY 2 cut(s) 106, 889
BstYI RGATCY 2 cut(s) 106, 889
BsuRI GGCC 4 cut(s) 326, 562, 795, 997
BtgI CCRYGG 1 cut(s) 488
BtsI GCAGTG 1 cut(s) 17
BtsIMutI CAGTG 2 cut(s) 17, 956
Cac8I GCNNGC 1 cut(s) 927
CfoI GCGC 1 cut(s) 507
Cfr10I RCCGGY 1 cut(s) 412
Csp6I GTAC 3 cut(s) 291, 703, 972
CviAII CATG 7 cut(s) 27, 120, 489, 671, 721, 857, 969
CviQI GTAC 3 cut(s) 291, 703, 972
DdeI CTNAG 1 cut(s) 397
DpnI GATC 4 cut(s) 108, 192, 265, 891
DpnII GATC 4 cut(s) 106, 190, 263, 889
EaeI YGGCCR 2 cut(s) 324, 560
EciI GGCGGA 1 cut(s) 236
Ecl136II GAGCTC 1 cut(s) 403
Eco130I CCWWGG 2 cut(s) 488, 901
Eco24I GRGCYC 1 cut(s) 405
Eco31I GGTCTC 1 cut(s) 324
Eco53kI GAGCTC 1 cut(s) 403
EcoICRI GAGCTC 1 cut(s) 403
EcoNI CCTNNNNNAGG 1 cut(s) 721
EcoRI GAATTC 1 cut(s) 444
EcoT14I CCWWGG 2 cut(s) 488, 901
EcoT38I GRGCYC 1 cut(s) 405
ErhI CCWWGG 2 cut(s) 488, 901
FaeI CATG 7 cut(s) 30, 123, 492, 674, 724, 860, 972
FalI AAGNNNNNCTT 2 cut(s) 792, 824
FaqI GGGAC 1 cut(s) 706
FatI CATG 7 cut(s) 26, 119, 488, 670, 720, 856, 968
FauI CCCGC 1 cut(s) 454
FauNDI CATATG 2 cut(s) 697, 844
Fnu4HI GCNGC 3 cut(s) 391, 394, 503
FriOI GRGCYC 1 cut(s) 405
Fsp4HI GCNGC 3 cut(s) 391, 394, 503
FspBI CTAG 7 cut(s) 254, 315, 419, 453, 861, 953, 1057
FspI TGCGCA 1 cut(s) 506
GlaI GCGC 1 cut(s) 506
GluI GCNGC 3 cut(s) 391, 394, 503
HaeIII GGCC 4 cut(s) 326, 562, 795, 997
HapII CCGG 2 cut(s) 413, 559
HhaI GCGC 1 cut(s) 507
Hin1II CATG 7 cut(s) 30, 123, 492, 674, 724, 860, 972
Hin6I GCGC 1 cut(s) 505
HinP1I GCGC 1 cut(s) 505
HincII GTYRAC 1 cut(s) 789
HindII GTYRAC 1 cut(s) 789
HindIII AAGCTT 1 cut(s) 623
HinfI GANTC 2 cut(s) 830, 874
HpaII CCGG 2 cut(s) 413, 559
Hpy166II GTNNAC 1 cut(s) 789
Hpy188I TCNGA 4 cut(s) 621, 742, 873, 879
Hpy188III TCNNGA 5 cut(s) 158, 254, 332, 818, 932
Hpy8I GTNNAC 1 cut(s) 789
HpyAV CCTTC 3 cut(s) 204, 434, 562
HpyCH4III ACNGT 1 cut(s) 883
HpyCH4IV ACGT 1 cut(s) 853
HpyF3I CTNAG 1 cut(s) 397
HpySE526I ACGT 1 cut(s) 853
Hsp92II CATG 7 cut(s) 30, 123, 492, 674, 724, 860, 972
HspAI GCGC 1 cut(s) 505
KpnI GGTACC 1 cut(s) 706
Kzo9I GATC 4 cut(s) 106, 190, 263, 889
LmnI GCTCC 2 cut(s) 408, 470
Lsp1109I GCAGC 3 cut(s) 377, 380, 489
MaeI CTAG 7 cut(s) 254, 315, 419, 453, 861, 953, 1057
MaeII ACGT 1 cut(s) 853
MaeIII GTNAC 3 cut(s) 230, 332, 731
MalI GATC 4 cut(s) 108, 192, 265, 891
MboI GATC 4 cut(s) 106, 190, 263, 889
MboII GAAGA 3 cut(s) 116, 833, 929
MflI RGATCY 2 cut(s) 106, 889
MhlI GDGCHC 1 cut(s) 405
MlsI TGGCCA 1 cut(s) 326
MluCI AATT 8 cut(s) 95, 141, 224, 267, 444, 531, 564, 824
MluNI TGGCCA 1 cut(s) 326
MlyI GAGTC 1 cut(s) 839
MnlI CCTC 4 cut(s) 34, 598, 666, 717
Mox20I TGGCCA 1 cut(s) 326
MroXI GAANNNNTTC 1 cut(s) 444
MscI TGGCCA 1 cut(s) 326
MseI TTAA 4 cut(s) 32, 243, 276, 377
MslI CAYNNNNRTG 3 cut(s) 369, 861, 967
Msp20I TGGCCA 1 cut(s) 326
MspI CCGG 2 cut(s) 413, 559
MspR9I CCNGG 1 cut(s) 559
NciI CCSGG 1 cut(s) 559
NcoI CCATGG 1 cut(s) 488
NdeI CATATG 2 cut(s) 697, 844
NdeII GATC 4 cut(s) 106, 190, 263, 889
NlaIII CATG 7 cut(s) 30, 123, 492, 674, 724, 860, 972
NlaIV GGNNCC 1 cut(s) 704
NmuCI GTSAC 1 cut(s) 332
NsbI TGCGCA 1 cut(s) 506
NspI RCATGY 1 cut(s) 674
PdmI GAANNNNTTC 1 cut(s) 444
PfeI GAWTC 1 cut(s) 874
PkrI GCNGC 3 cut(s) 392, 395, 504
PleI GAGTC 1 cut(s) 838
PpsI GAGTC 1 cut(s) 838
PsiI TTATAA 1 cut(s) 341
Psp124BI GAGCTC 1 cut(s) 405
PspN4I GGNNCC 1 cut(s) 704
PsuI RGATCY 2 cut(s) 106, 889
RsaI GTAC 3 cut(s) 292, 704, 973
RsaNI GTAC 3 cut(s) 291, 703, 972
RseI CAYNNNNRTG 3 cut(s) 369, 861, 967
SacI GAGCTC 1 cut(s) 405
SaqAI TTAA 4 cut(s) 32, 243, 276, 377
SatI GCNGC 3 cut(s) 391, 394, 503
Sau3AI GATC 4 cut(s) 106, 190, 263, 889
ScaI AGTACT 1 cut(s) 292
SchI GAGTC 1 cut(s) 839
ScrFI CCNGG 1 cut(s) 559
SduI GDGCHC 1 cut(s) 405
SmiMI CAYNNNNRTG 3 cut(s) 369, 861, 967
SmlI CTYRAG 1 cut(s) 930
SmoI CTYRAG 1 cut(s) 930
SpeI ACTAGT 1 cut(s) 452
Sse9I AATT 8 cut(s) 95, 141, 224, 267, 444, 531, 564, 824
SsiI CCGC 2 cut(s) 221, 461
SspI AATATT 1 cut(s) 496
SspMI CTAG 7 cut(s) 254, 315, 419, 453, 861, 953, 1057
SstI GAGCTC 1 cut(s) 405
StyD4I CCNGG 1 cut(s) 557
StyI CCWWGG 2 cut(s) 488, 901
TaaI ACNGT 1 cut(s) 883
TaiI ACGT 1 cut(s) 856
TaqI TCGA 1 cut(s) 833
TaqII GACCGA 1 cut(s) 276
TasI AATT 8 cut(s) 95, 141, 224, 267, 444, 531, 564, 824
TatI WGTACW 1 cut(s) 290
TfiI GAWTC 1 cut(s) 874
Tru1I TTAA 4 cut(s) 32, 243, 276, 377
Tru9I TTAA 4 cut(s) 32, 243, 276, 377
TscAI CASTG 2 cut(s) 24, 963
TseFI GTSAC 1 cut(s) 332
TseI GCWGC 3 cut(s) 390, 393, 502
Tsp45I GTSAC 1 cut(s) 332
TspDTI ATGAA 6 cut(s) 108, 177, 324, 560, 831, 996
TspRI CASTG 2 cut(s) 24, 963
XagI CCTNNNNNAGG 1 cut(s) 721
XapI RAATTY 3 cut(s) 224, 444, 824
XbaI TCTAGA 1 cut(s) 253
XceI RCATGY 1 cut(s) 674
XcmI CCANNNNNNNNNTGG 1 cut(s) 242
XmnI GAANNNNTTC 1 cut(s) 444
XspI CTAG 7 cut(s) 254, 315, 419, 453, 861, 953, 1057
ZrmI AGTACT 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.