MD05G1105000.v1.1
NAC Family

Inactive serine threonine-protein kinase At1g67470-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
21821338 .. 21822894
1557 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1105000.v1.1.491

Sequence Viewer

Length: 1065 bp
ATGCCATCAAAACTTGTGAAACTGTTCCCAAGGCTACCATTTTTTAGGAAGAAGGAAAGAGAGTGGTCGTACTACAAGAATCTAAAAAAGCTATTAGAGGATCTCTTTGCTTCTGGCGATGGCGAATCTCATCCTATTCATTGTTACTCTGCTGATGACATCATCAGGGCAACCAACAACTTCCATCCTTCTCGCATTGTAACTAAGAGTTCAGGCTACAAAATGTTCAGGGGACTTCTAGATGGCCGATCAATTATCGTTGCAAAGTACCGCCTTGGGAGCCGAAAGGAGGATTGGGGCAGGTCTTGCGTTATCCGTGACATTGTCATTTCATTACAGATGAGCCACCATGAGAATGTTTTGAAACTCTTGGGCTGCTGCTTAGAGTTCCCTATACCAGTGCTAGTGCATGAATACGTAGCAAAAGGAGTTCTCAATCCTGATGGAAGTTTAAGAGGGGCTAATGAAGATCAAATCATACTACCATGGAACATTAGATTGCGTATTGCAAAGCAGGTTGCTAGTGCAGTTTCATATCTCCATACCGCTTTTGCCGGACACATCATTTATGTGGATCTGAAACCCAGCTGCCTGTTCTTGGATGATGACTATGTTCCCAAACTTTACGTCTTCTCGCACTCTATAACCATTCCTCCTGTGGAATCGGATGTTGAAGATGATGTGACTGGGACAATTGGGTACATTGACCCTGTCTACCTGTGGTGCAAAACTGATATTTATAGCTTTGGTGTGCTCTTACTTGTATTCCTGACCGGAGGAAAAGCTGTGGAATCTGATCAGGTAGAAGGAATTGGCTCTTTGATTTCATATGTTCAAGGTTGTCATTGTCGACTTGAGGCAATTGTTGATCCAAAGATCTATGAGGAAGTGAGGCGAAATGTGCAAGTACGACACCAGTTACAACACCAGTTGCATGATTTCCTAAACCTGGCATTGTTGTGCATTGACCGTAGAACTGAAGGCCGACGATGTATGGTGGATGTGGCTAGAGCACTTATTCGAATTGAAGAGTGTAGGAGGAAAAGCGATAGAGAAACATTTTAA

Protein Analysis

355

Amino Acids

40.55

Weight (kDa)

8.22

Isoelectric Point (pI)

41.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 85 - 315 3.4e-16 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 112 - 329 1.4e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 291, 505
AccI GTMKAC 2 cut(s) 714, 850
AciI CCGC 2 cut(s) 271, 546
AclWI GGATC 3 cut(s) 108, 582, 863
AcoI YGGCCR 1 cut(s) 244
AcuI CTGAAG 1 cut(s) 999
AfaI GTAC 4 cut(s) 71, 269, 701, 909
AfiI CCNNNNNNNGG 3 cut(s) 289, 598, 949
AgsI TTSAA 4 cut(s) 364, 674, 836, 1028
AjnI CCWGG 1 cut(s) 948
AjuI GAANNNNNNNTTGG 2 cut(s) 277, 309
AluBI AGCT 4 cut(s) 91, 588, 744, 785
AluI AGCT 4 cut(s) 91, 588, 744, 785
Alw21I GWGCWC 2 cut(s) 756, 1015
AlwI GGATC 3 cut(s) 108, 582, 863
AoxI GGCC 2 cut(s) 244, 982
ApeKI GCWGC 3 cut(s) 375, 378, 588
ArsI GACNNNNNNTTYG 2 cut(s) 612, 644
Asp700I GAANNNNTTC 1 cut(s) 23
AsuII TTCGAA 1 cut(s) 1021
BbsI GAAGAC 1 cut(s) 622
Bbv12I GWGCWC 2 cut(s) 756, 1015
BbvI GCAGC 3 cut(s) 362, 365, 575
BccI CCATC 5 cut(s) 13, 113, 192, 236, 437
BciT130I CCWGG 1 cut(s) 950
BclI TGATCA 1 cut(s) 796
BfaI CTAG 4 cut(s) 239, 404, 522, 1008
BfuAI ACCTGC 2 cut(s) 291, 505
BglII AGATCT 1 cut(s) 876
BisI GCNGC 3 cut(s) 376, 379, 589
BlsI GCNGC 3 cut(s) 377, 380, 590
Bme1390I CCNGG 1 cut(s) 950
BmiI GGNNCC 1 cut(s) 281
BmrFI CCNGG 1 cut(s) 950
BmrI ACTGGG 1 cut(s) 696
BmuI ACTGGG 1 cut(s) 696
BpiI GAAGAC 1 cut(s) 622
Bpu14I TTCGAA 1 cut(s) 1021
BpuEI CTTGAG 1 cut(s) 875
BsaAI YACGTR 1 cut(s) 418
BsaJI CCNNGG 3 cut(s) 29, 274, 485
BsaWI WCCGGW 1 cut(s) 773
BsaXI ACNNNNNCTCC 2 cut(s) 637, 667
Bsc4I CCNNNNNNNGG 3 cut(s) 289, 598, 949
Bse1I ACTGG 4 cut(s) 398, 691, 916, 928
BseBI CCWGG 1 cut(s) 950
BseDI CCNNGG 3 cut(s) 29, 274, 485
BseGI GGATG 5 cut(s) 130, 184, 607, 673, 1006
BseLI CCNNNNNNNGG 3 cut(s) 289, 598, 949
BseNI ACTGG 4 cut(s) 398, 691, 916, 928
BseXI GCAGC 3 cut(s) 362, 365, 575
BseYI CCCAGC 1 cut(s) 584
BsgI GTGCAG 1 cut(s) 546
BshFI GGCC 2 cut(s) 246, 984
BsiHKAI GWGCWC 2 cut(s) 756, 1015
BsiSI CCGG 2 cut(s) 555, 774
BslFI GGGAC 2 cut(s) 246, 703
BslI CCNNNNNNNGG 3 cut(s) 289, 598, 949
BsmFI GGGAC 2 cut(s) 246, 703
BsnI GGCC 2 cut(s) 246, 984
Bsp119I TTCGAA 1 cut(s) 1021
Bsp1286I GDGCHC 2 cut(s) 756, 1015
Bsp143I GATC 7 cut(s) 100, 248, 469, 574, 796, 868, 876
Bsp19I CCATGG 1 cut(s) 485
BspACI CCGC 2 cut(s) 271, 546
BspANI GGCC 2 cut(s) 246, 984
BspLI GGNNCC 1 cut(s) 281
BspMI ACCTGC 2 cut(s) 291, 505
BspPI GGATC 3 cut(s) 108, 582, 863
BspT104I TTCGAA 1 cut(s) 1021
BsrI ACTGG 4 cut(s) 398, 691, 916, 928
BssECI CCNNGG 3 cut(s) 29, 274, 485
BssMI GATC 7 cut(s) 100, 248, 469, 574, 796, 868, 876
BssT1I CCWWGG 3 cut(s) 29, 274, 485
Bst2UI CCWGG 1 cut(s) 950
Bst4CI ACNGT 2 cut(s) 24, 971
Bst6I CTCTTC 1 cut(s) 1023
BstAPI GCANNNNNTGC 1 cut(s) 306
BstBAI YACGTR 1 cut(s) 418
BstBI TTCGAA 1 cut(s) 1021
BstDEI CTNAG 2 cut(s) 204, 382
BstDSI CCRYGG 1 cut(s) 485
BstF5I GGATG 5 cut(s) 130, 184, 607, 673, 1006
BstKTI GATC 7 cut(s) 103, 251, 472, 577, 799, 871, 879
BstMBI GATC 7 cut(s) 100, 248, 469, 574, 796, 868, 876
BstMWI GCNNNNNNNGC 3 cut(s) 279, 306, 901
BstNI CCWGG 1 cut(s) 950
BstSCI CCNGG 1 cut(s) 948
BstSNI TACGTA 1 cut(s) 418
BstV1I GCAGC 3 cut(s) 362, 365, 575
BstV2I GAAGAC 1 cut(s) 622
BstX2I RGATCY 3 cut(s) 100, 574, 876
BstYI RGATCY 3 cut(s) 100, 574, 876
BsuRI GGCC 2 cut(s) 246, 984
BtgI CCRYGG 1 cut(s) 485
BtgZI GCGATG 1 cut(s) 132
BtsCI GGATG 5 cut(s) 130, 184, 607, 673, 1006
BtsIMutI CAGTG 1 cut(s) 405
BveI ACCTGC 2 cut(s) 291, 505
Csp6I GTAC 4 cut(s) 70, 268, 700, 908
CviAII CATG 4 cut(s) 350, 410, 486, 935
CviQI GTAC 4 cut(s) 70, 268, 700, 908
DdeI CTNAG 2 cut(s) 204, 382
DpnI GATC 7 cut(s) 102, 250, 471, 576, 798, 870, 878
DpnII GATC 7 cut(s) 100, 248, 469, 574, 796, 868, 876
EaeI YGGCCR 1 cut(s) 244
Eam1104I CTCTTC 1 cut(s) 1023
EarI CTCTTC 1 cut(s) 1023
Eco105I TACGTA 1 cut(s) 418
Eco130I CCWWGG 3 cut(s) 29, 274, 485
Eco57I CTGAAG 1 cut(s) 999
EcoRII CCWGG 1 cut(s) 948
EcoT14I CCWWGG 3 cut(s) 29, 274, 485
ErhI CCWWGG 3 cut(s) 29, 274, 485
FaeI CATG 4 cut(s) 353, 413, 489, 938
FaqI GGGAC 2 cut(s) 246, 703
FatI CATG 4 cut(s) 349, 409, 485, 934
FauNDI CATATG 1 cut(s) 829
FbaI TGATCA 1 cut(s) 796
FblI GTMKAC 2 cut(s) 714, 850
Fnu4HI GCNGC 3 cut(s) 376, 379, 589
FokI GGATG 5 cut(s) 117, 171, 614, 680, 1013
Fsp4HI GCNGC 3 cut(s) 376, 379, 589
FspBI CTAG 4 cut(s) 239, 404, 522, 1008
GluI GCNGC 3 cut(s) 376, 379, 589
GsaI CCCAGC 1 cut(s) 588
HaeIII GGCC 2 cut(s) 246, 984
HapII CCGG 2 cut(s) 555, 774
Hin1II CATG 4 cut(s) 353, 413, 489, 938
HincII GTYRAC 1 cut(s) 851
HindII GTYRAC 1 cut(s) 851
HinfI GANTC 4 cut(s) 79, 125, 662, 791
HpaII CCGG 2 cut(s) 555, 774
Hpy166II GTNNAC 2 cut(s) 715, 851
Hpy188I TCNGA 3 cut(s) 579, 667, 796
Hpy188III TCNNGA 3 cut(s) 239, 440, 769
Hpy8I GTNNAC 2 cut(s) 715, 851
Hpy99I CGWCG 1 cut(s) 990
HpyAV CCTTC 4 cut(s) 46, 198, 800, 974
HpyCH4III ACNGT 2 cut(s) 24, 971
HpyCH4IV ACGT 2 cut(s) 417, 627
HpyCH4V TGCA 8 cut(s) 263, 409, 509, 527, 726, 904, 934, 963
HpyF10VI GCNNNNNNNGC 3 cut(s) 279, 306, 901
HpyF3I CTNAG 2 cut(s) 204, 382
HpySE526I ACGT 2 cut(s) 417, 627
Hsp92II CATG 4 cut(s) 353, 413, 489, 938
Ksp22I TGATCA 1 cut(s) 796
Kzo9I GATC 7 cut(s) 100, 248, 469, 574, 796, 868, 876
LmnI GCTCC 1 cut(s) 279
Lsp1109I GCAGC 3 cut(s) 362, 365, 575
MaeI CTAG 4 cut(s) 239, 404, 522, 1008
MaeII ACGT 2 cut(s) 417, 627
MaeIII GTNAC 5 cut(s) 143, 199, 317, 682, 918
MalI GATC 7 cut(s) 102, 250, 471, 576, 798, 870, 878
MboI GATC 7 cut(s) 100, 248, 469, 574, 796, 868, 876
MboII GAAGA 5 cut(s) 61, 479, 622, 686, 1040
MfeI CAATTG 2 cut(s) 693, 861
MflI RGATCY 3 cut(s) 100, 574, 876
MhlI GDGCHC 2 cut(s) 756, 1015
MluCI AATT 5 cut(s) 252, 693, 810, 861, 1023
MnlI CCTC 9 cut(s) 91, 283, 449, 663, 770, 850, 877, 885, 1032
MroXI GAANNNNTTC 1 cut(s) 23
MseI TTAA 2 cut(s) 452, 1063
MslI CAYNNNNRTG 3 cut(s) 354, 569, 958
MspA1I CMGCKG 1 cut(s) 588
MspI CCGG 2 cut(s) 555, 774
MspR9I CCNGG 1 cut(s) 950
MunI CAATTG 2 cut(s) 693, 861
MvaI CCWGG 1 cut(s) 950
MwoI GCNNNNNNNGC 3 cut(s) 279, 306, 901
NcoI CCATGG 1 cut(s) 485
NdeI CATATG 1 cut(s) 829
NdeII GATC 7 cut(s) 100, 248, 469, 574, 796, 868, 876
NlaIII CATG 4 cut(s) 353, 413, 489, 938
NlaIV GGNNCC 1 cut(s) 281
NmuCI GTSAC 2 cut(s) 317, 682
NspV TTCGAA 1 cut(s) 1021
PdmI GAANNNNTTC 1 cut(s) 23
PfeI GAWTC 4 cut(s) 79, 125, 662, 791
PflFI GACNNNGTC 2 cut(s) 323, 710
PkrI GCNGC 3 cut(s) 377, 380, 590
Ppu21I YACGTR 1 cut(s) 418
Psp6I CCWGG 1 cut(s) 948
PspFI CCCAGC 1 cut(s) 584
PspGI CCWGG 1 cut(s) 948
PspN4I GGNNCC 1 cut(s) 281
PsuI RGATCY 3 cut(s) 100, 574, 876
PsyI GACNNNGTC 2 cut(s) 323, 710
PvuII CAGCTG 1 cut(s) 588
RsaI GTAC 4 cut(s) 71, 269, 701, 909
RsaNI GTAC 4 cut(s) 70, 268, 700, 908
RseI CAYNNNNRTG 3 cut(s) 354, 569, 958
SalI GTCGAC 1 cut(s) 849
SaqAI TTAA 2 cut(s) 452, 1063
SatI GCNGC 3 cut(s) 376, 379, 589
Sau3AI GATC 7 cut(s) 100, 248, 469, 574, 796, 868, 876
ScrFI CCNGG 1 cut(s) 950
SduI GDGCHC 2 cut(s) 756, 1015
SfuI TTCGAA 1 cut(s) 1021
SmiMI CAYNNNNRTG 3 cut(s) 354, 569, 958
SmlI CTYRAG 1 cut(s) 854
SmoI CTYRAG 1 cut(s) 854
SnaBI TACGTA 1 cut(s) 418
Sse9I AATT 5 cut(s) 252, 693, 810, 861, 1023
SsiI CCGC 2 cut(s) 271, 546
SspMI CTAG 4 cut(s) 239, 404, 522, 1008
StyD4I CCNGG 1 cut(s) 948
StyI CCWWGG 3 cut(s) 29, 274, 485
TaaI ACNGT 2 cut(s) 24, 971
TaiI ACGT 2 cut(s) 420, 630
TaqI TCGA 2 cut(s) 850, 1021
TasI AATT 5 cut(s) 252, 693, 810, 861, 1023
TfiI GAWTC 4 cut(s) 79, 125, 662, 791
Tru1I TTAA 2 cut(s) 452, 1063
Tru9I TTAA 2 cut(s) 452, 1063
TscAI CASTG 1 cut(s) 405
TseFI GTSAC 2 cut(s) 317, 682
TseI GCWGC 3 cut(s) 375, 378, 588
Tsp45I GTSAC 2 cut(s) 317, 682
TspDTI ATGAA 6 cut(s) 128, 321, 426, 480, 522, 816
TspGWI ACGGA 1 cut(s) 305
TspRI CASTG 1 cut(s) 405
Tth111I GACNNNGTC 2 cut(s) 323, 710
XbaI TCTAGA 1 cut(s) 238
XcmI CCANNNNNNNNNTGG 1 cut(s) 655
XmiI GTMKAC 2 cut(s) 714, 850
XmnI GAANNNNTTC 1 cut(s) 23
XspI CTAG 4 cut(s) 239, 404, 522, 1008
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.