FvH4_2g09830

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
8694408 .. 8695624
1217 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g09830.t1

Sequence Viewer

Length: 1038 bp
ATGGATGAAAGGGGTAGGGCATTCTTCAACAACGGAAGGATCTTGTTAGAGGATCTCATTGCTTCTTGTGACGGAAAATCTAATCCTATTCGCAATTACTCTGCTTCTGAGCTCATTAAGGCCACCAACAATTTTGATCCTTCATGCATCATTCAAAATTGTACGCCTACTGGAGCAAGTCAGTTTCGTCATTCTATACATGTTTACCATGGTTACAAAATGTTCAAGGGCTTTATAGAAGATCGATACATCATTGTTAAGAAGTTCATGGGGACTAATGATGAAACTAGGTCGCTTGCTATTCGTGACATTGTCGTTTCAATGCAAATGAGCAACAATAAGAATGTTTTGAAGCTCTTGGGCTGCTGCTTAGAGTTCCCTATACCTGCTTTGGTGCATGAGTATGCAAGGAATGGAGTTGTTAGTTACCAAGGAGGTTTTGGGGCCAATGAGTCCTTGCCTTGGAGAGTTAGGTTGCGTATTGCAAAGCAGCTTGCAAATGCACTTACATATCTTCACACTGCCTTTCCAAGGCCTATCATTCATAGGGACCTGAAACCTAACTGCATTTTTTTGGATGAGGACTATGTCTCCAAACTCTGCAATTTCTCACTGTCCATAACCATTCCTCCTAAGCAATCATATGCTGAAGATAACCCAAAAGGGACATTTGGGTATGTTGATCCTACCTATATGAGGTCTGGTTACATTTCGGAAGAAGGTGATGTTTACAGCTTCGGTGTTCTATTACTTGTGTTCTTGACAGGACAAGAAGCTTTGATGAGGTATGAAGAGGGAGGAGAGTATGAGTCAATTATTCCCTATGTGAAATCTCATGCTTGTGATGGCCAGATTGAAACAATAGTGGATCCTAAAGTTCTTAAGGAGGCCAAGGGAGATAGATACACACAACAACACTTGCATGATTTCCTTGCACTAGGATTGTTATGCACCGATGACAGTAGTGAAGCAAGGCCTGATATGATCGATGTTGCGAAAGAACTCATAAGACTTGAGAAGTGTACATTACCCTGCTAG

Protein Analysis

346

Amino Acids

39.0

Weight (kDa)

6.02

Isoelectric Point (pI)

34.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 68 - 261 1.7e-21 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 85 - 275 9.4e-23 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 394
AclWI GGATC 6 cut(s) 47, 60, 131, 677, 863, 876
AcoI YGGCCR 1 cut(s) 847
AcuI CTGAAG 1 cut(s) 669
AfaI GTAC 2 cut(s) 163, 1024
AfiI CCNNNNNNNGG 3 cut(s) 462, 531, 696
AflII CTTAAG 1 cut(s) 881
AflIII ACRYGT 1 cut(s) 199
AgsI TTSAA 6 cut(s) 28, 155, 226, 321, 352, 857
AluBI AGCT 5 cut(s) 112, 355, 493, 735, 776
AluI AGCT 5 cut(s) 112, 355, 493, 735, 776
Alw21I GWGCWC 1 cut(s) 114
Alw26I GTCTC 1 cut(s) 595
AlwI GGATC 6 cut(s) 47, 60, 131, 677, 863, 876
AoxI GGCC 6 cut(s) 120, 444, 533, 847, 888, 974
ApeKI GCWGC 3 cut(s) 363, 366, 490
AspS9I GGNCC 2 cut(s) 444, 550
AsuHPI GGTGA 1 cut(s) 734
AvaII GGWCC 1 cut(s) 550
BalI TGGCCA 1 cut(s) 849
BamHI GGATCC 1 cut(s) 868
BanII GRGCYC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 114
BbvI GCAGC 3 cut(s) 350, 353, 502
BccI CCATC 1 cut(s) 839
BcoDI GTCTC 1 cut(s) 595
BfaI CTAG 3 cut(s) 288, 938, 1036
BfrI CTTAAG 1 cut(s) 881
BfuAI ACCTGC 1 cut(s) 394
BisI GCNGC 3 cut(s) 364, 367, 491
BlsI GCNGC 3 cut(s) 365, 368, 492
Bme18I GGWCC 1 cut(s) 550
BmgT120I GGNCC 2 cut(s) 444, 550
BmiI GGNNCC 3 cut(s) 445, 551, 870
BmsI GCATC 1 cut(s) 156
BpmI CTGGAG 1 cut(s) 192
Bpu10I CCTNAGC 1 cut(s) 633
BpuEI CTTGAG 1 cut(s) 1034
Bsa29I ATCGAT 2 cut(s) 244, 987
BsaJI CCNNGG 5 cut(s) 208, 430, 461, 530, 891
BsaXI ACNNNNNCTCC 4 cut(s) 575, 605, 613, 643
Bsc4I CCNNNNNNNGG 3 cut(s) 462, 531, 696
Bse1I ACTGG 1 cut(s) 175
Bse3DI GCAATG 1 cut(s) 57
BseCI ATCGAT 2 cut(s) 244, 987
BseDI CCNNGG 5 cut(s) 208, 430, 461, 530, 891
BseGI GGATG 2 cut(s) 10, 583
BseLI CCNNNNNNNGG 3 cut(s) 462, 531, 696
BseMI GCAATG 1 cut(s) 57
BseMII CTCAG 1 cut(s) 99
BseNI ACTGG 1 cut(s) 175
BseRI GAGGAG 1 cut(s) 813
BseXI GCAGC 3 cut(s) 350, 353, 502
BshFI GGCC 6 cut(s) 122, 446, 535, 849, 890, 976
BshVI ATCGAT 2 cut(s) 244, 987
BsiHKAI GWGCWC 1 cut(s) 114
BslFI GGGAC 3 cut(s) 286, 563, 679
BslI CCNNNNNNNGG 3 cut(s) 462, 531, 696
BsmAI GTCTC 1 cut(s) 595
BsmFI GGGAC 3 cut(s) 286, 563, 679
BsmI GAATGC 1 cut(s) 20
BsnI GGCC 6 cut(s) 122, 446, 535, 849, 890, 976
Bsp1286I GDGCHC 1 cut(s) 114
Bsp1407I TGTACA 1 cut(s) 1022
Bsp143I GATC 7 cut(s) 39, 52, 136, 241, 682, 868, 984
Bsp19I CCATGG 1 cut(s) 208
BspANI GGCC 6 cut(s) 122, 446, 535, 849, 890, 976
BspCNI CTCAG 1 cut(s) 100
BspDI ATCGAT 2 cut(s) 244, 987
BspLI GGNNCC 3 cut(s) 445, 551, 870
BspMI ACCTGC 1 cut(s) 394
BspPI GGATC 6 cut(s) 47, 60, 131, 677, 863, 876
BspTI CTTAAG 1 cut(s) 881
BsrDI GCAATG 1 cut(s) 57
BsrGI TGTACA 1 cut(s) 1022
BsrI ACTGG 1 cut(s) 175
BssECI CCNNGG 5 cut(s) 208, 430, 461, 530, 891
BssMI GATC 7 cut(s) 39, 52, 136, 241, 682, 868, 984
BssT1I CCWWGG 5 cut(s) 208, 430, 461, 530, 891
Bst4CI ACNGT 2 cut(s) 615, 962
Bst6I CTCTTC 1 cut(s) 786
BstAFI CTTAAG 1 cut(s) 881
BstAUI TGTACA 1 cut(s) 1022
BstC8I GCNNGC 2 cut(s) 297, 495
BstDEI CTNAG 3 cut(s) 108, 370, 633
BstDSI CCRYGG 1 cut(s) 208
BstENI CCTNNNNNAGG 2 cut(s) 529, 694
BstF5I GGATG 2 cut(s) 10, 583
BstKTI GATC 7 cut(s) 42, 55, 139, 244, 685, 871, 987
BstMAI GTCTC 1 cut(s) 595
BstMBI GATC 7 cut(s) 39, 52, 136, 241, 682, 868, 984
BstNSI RCATGY 1 cut(s) 203
BstV1I GCAGC 3 cut(s) 350, 353, 502
BstX2I RGATCY 3 cut(s) 39, 52, 868
BstYI RGATCY 3 cut(s) 39, 52, 868
Bsu15I ATCGAT 2 cut(s) 244, 987
BsuRI GGCC 6 cut(s) 122, 446, 535, 849, 890, 976
BsuTUI ATCGAT 2 cut(s) 244, 987
BtgI CCRYGG 1 cut(s) 208
BtsCI GGATG 2 cut(s) 10, 583
BtsI GCAGTG 1 cut(s) 519
BtsIMutI CAGTG 2 cut(s) 519, 611
BveI ACCTGC 1 cut(s) 394
Cac8I GCNNGC 2 cut(s) 297, 495
Cfr13I GGNCC 2 cut(s) 444, 550
ClaI ATCGAT 2 cut(s) 244, 987
Csp6I GTAC 2 cut(s) 162, 1023
CviAII CATG 7 cut(s) 144, 200, 209, 268, 398, 836, 923
CviQI GTAC 2 cut(s) 162, 1023
DdeI CTNAG 3 cut(s) 108, 370, 633
DpnI GATC 7 cut(s) 41, 54, 138, 243, 684, 870, 986
DpnII GATC 7 cut(s) 39, 52, 136, 241, 682, 868, 984
EaeI YGGCCR 1 cut(s) 847
Eam1104I CTCTTC 1 cut(s) 786
EarI CTCTTC 1 cut(s) 786
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 5 cut(s) 208, 430, 461, 530, 891
Eco147I AGGCCT 2 cut(s) 535, 976
Eco24I GRGCYC 1 cut(s) 114
Eco47I GGWCC 1 cut(s) 550
Eco53kI GAGCTC 1 cut(s) 112
Eco57I CTGAAG 1 cut(s) 669
EcoICRI GAGCTC 1 cut(s) 112
EcoNI CCTNNNNNAGG 2 cut(s) 529, 694
EcoO109I RGGNCCY 1 cut(s) 550
EcoT14I CCWWGG 5 cut(s) 208, 430, 461, 530, 891
EcoT22I ATGCAT 1 cut(s) 149
EcoT38I GRGCYC 1 cut(s) 114
ErhI CCWWGG 5 cut(s) 208, 430, 461, 530, 891
FaeI CATG 7 cut(s) 147, 203, 212, 271, 401, 839, 926
FaqI GGGAC 3 cut(s) 286, 563, 679
FatI CATG 7 cut(s) 143, 199, 208, 267, 397, 835, 922
FauNDI CATATG 1 cut(s) 643
Fnu4HI GCNGC 3 cut(s) 364, 367, 491
FokI GGATG 2 cut(s) 17, 590
FriOI GRGCYC 1 cut(s) 114
Fsp4HI GCNGC 3 cut(s) 364, 367, 491
FspBI CTAG 3 cut(s) 288, 938, 1036
GluI GCNGC 3 cut(s) 364, 367, 491
GsuI CTGGAG 1 cut(s) 192
HaeIII GGCC 6 cut(s) 122, 446, 535, 849, 890, 976
Hin1II CATG 7 cut(s) 147, 203, 212, 271, 401, 839, 926
HindIII AAGCTT 1 cut(s) 774
HinfI GANTC 2 cut(s) 452, 809
HphI GGTGA 1 cut(s) 734
Hpy166II GTNNAC 3 cut(s) 205, 730, 1023
Hpy188I TCNGA 2 cut(s) 109, 715
Hpy188III TCNNGA 2 cut(s) 305, 760
Hpy8I GTNNAC 3 cut(s) 205, 730, 1023
HpyAV CCTTC 3 cut(s) 30, 150, 713
HpyCH4III ACNGT 2 cut(s) 615, 962
HpyF3I CTNAG 3 cut(s) 108, 370, 633
Hsp92II CATG 7 cut(s) 147, 203, 212, 271, 401, 839, 926
Kzo9I GATC 7 cut(s) 39, 52, 136, 241, 682, 868, 984
LmnI GCTCC 1 cut(s) 173
LpnPI CCDG 7 cut(s) 156, 399, 566, 687, 750, 863, 990
Lsp1109I GCAGC 3 cut(s) 350, 353, 502
LweI GCATC 1 cut(s) 156
MaeI CTAG 3 cut(s) 288, 938, 1036
MaeIII GTNAC 5 cut(s) 68, 212, 305, 425, 704
MalI GATC 7 cut(s) 41, 54, 138, 243, 684, 870, 986
MboI GATC 7 cut(s) 39, 52, 136, 241, 682, 868, 984
MboII GAAGA 6 cut(s) 16, 251, 506, 662, 728, 803
MflI RGATCY 3 cut(s) 39, 52, 868
MhlI GDGCHC 1 cut(s) 114
MlsI TGGCCA 1 cut(s) 849
MluCI AATT 5 cut(s) 94, 130, 157, 604, 813
MluNI TGGCCA 1 cut(s) 849
MlyI GAGTC 2 cut(s) 461, 818
MnlI CCTC 9 cut(s) 43, 428, 574, 639, 690, 777, 787, 791, 880
Mox20I TGGCCA 1 cut(s) 849
Mph1103I ATGCAT 1 cut(s) 149
MscI TGGCCA 1 cut(s) 849
MseI TTAA 3 cut(s) 117, 258, 882
MslI CAYNNNNRTG 3 cut(s) 402, 840, 921
Msp20I TGGCCA 1 cut(s) 849
MspCI CTTAAG 1 cut(s) 881
Mva1269I GAATGC 1 cut(s) 20
NcoI CCATGG 1 cut(s) 208
NdeI CATATG 1 cut(s) 643
NdeII GATC 7 cut(s) 39, 52, 136, 241, 682, 868, 984
NlaIII CATG 7 cut(s) 147, 203, 212, 271, 401, 839, 926
NlaIV GGNNCC 3 cut(s) 445, 551, 870
NmuCI GTSAC 2 cut(s) 68, 305
NsiI ATGCAT 1 cut(s) 149
NspI RCATGY 1 cut(s) 203
PceI AGGCCT 2 cut(s) 535, 976
PciI ACATGT 1 cut(s) 199
PctI GAATGC 1 cut(s) 20
PflFI GACNNNGTC 2 cut(s) 311, 587
PkrI GCNGC 3 cut(s) 365, 368, 492
PleI GAGTC 2 cut(s) 460, 817
PpsI GAGTC 2 cut(s) 460, 817
PpuMI RGGWCCY 1 cut(s) 550
PscI ACATGT 1 cut(s) 199
Psp124BI GAGCTC 1 cut(s) 114
Psp5II RGGWCCY 1 cut(s) 550
PspN4I GGNNCC 3 cut(s) 445, 551, 870
PspPI GGNCC 2 cut(s) 444, 550
PspPPI RGGWCCY 1 cut(s) 550
PsuI RGATCY 3 cut(s) 39, 52, 868
PsyI GACNNNGTC 2 cut(s) 311, 587
RsaI GTAC 2 cut(s) 163, 1024
RsaNI GTAC 2 cut(s) 162, 1023
RseI CAYNNNNRTG 3 cut(s) 402, 840, 921
SacI GAGCTC 1 cut(s) 114
SaqAI TTAA 3 cut(s) 117, 258, 882
SatI GCNGC 3 cut(s) 364, 367, 491
Sau3AI GATC 7 cut(s) 39, 52, 136, 241, 682, 868, 984
Sau96I GGNCC 2 cut(s) 444, 550
SchI GAGTC 2 cut(s) 461, 818
SduI GDGCHC 1 cut(s) 114
SfaNI GCATC 1 cut(s) 156
SinI GGWCC 1 cut(s) 550
SmiMI CAYNNNNRTG 3 cut(s) 402, 840, 921
SmlI CTYRAG 2 cut(s) 881, 1013
SmoI CTYRAG 2 cut(s) 881, 1013
Sse9I AATT 5 cut(s) 94, 130, 157, 604, 813
SseBI AGGCCT 2 cut(s) 535, 976
SspMI CTAG 3 cut(s) 288, 938, 1036
SstI GAGCTC 1 cut(s) 114
StuI AGGCCT 2 cut(s) 535, 976
StyI CCWWGG 5 cut(s) 208, 430, 461, 530, 891
TaaI ACNGT 2 cut(s) 615, 962
TaqI TCGA 2 cut(s) 244, 987
TasI AATT 5 cut(s) 94, 130, 157, 604, 813
TatI WGTACW 1 cut(s) 1022
Tru1I TTAA 3 cut(s) 117, 258, 882
Tru9I TTAA 3 cut(s) 117, 258, 882
TscAI CASTG 2 cut(s) 526, 618
TseFI GTSAC 2 cut(s) 68, 305
TseI GCWGC 3 cut(s) 363, 366, 490
Tsp45I GTSAC 2 cut(s) 68, 305
TspDTI ATGAA 6 cut(s) 21, 132, 256, 297, 533, 804
TspGWI ACGGA 2 cut(s) 48, 87
TspRI CASTG 2 cut(s) 526, 618
Tth111I GACNNNGTC 2 cut(s) 311, 587
Vha464I CTTAAG 1 cut(s) 881
VpaK11BI GGWCC 1 cut(s) 550
XagI CCTNNNNNAGG 2 cut(s) 529, 694
XceI RCATGY 1 cut(s) 203
XcmI CCANNNNNNNNNTGG 1 cut(s) 437
XspI CTAG 3 cut(s) 288, 938, 1036
Zsp2I ATGCAT 1 cut(s) 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.