Rw6G004190

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
6816482 .. 6817873
1392 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G004190.1

Sequence Viewer

Length: 1035 bp
ATGCTATCTAAACTCTTGTACTCTCTGCTTCCATGTTTGAGAAAGGAGGAAAATTATGCTTTGGATAATGGAAGCAAATTATTAGAGGATCTGATTGCTTCTTGTGATGGAAAATCTAATCCCATTCGCCATTACTCTGCTGATGAACTTGTCAGGGCAACCAATAACTTCCATCCTTCTTGTCGTATATCTAGTAGATACTGTTTATATAAGGGTTTTCTAGACAACCGATTGGTTATGATTAATCGGCTGGAAATTTCAACTTTTTATGGGCACTTGAGAGATGAGGCTATTCGTGACATTATAATATCAATGCAGATGAGCACTCATAAGAATGTTTTGAAACTGTTGGGCTGCTGCTTAGAGTTCCCTGTACCAGCTCTGGTGCATGAATATGCAGCCAAAGGAGTTATCAACCGGGCCGGAGGTTATGGGGATAATGAGTCCCTCCCATGGAAAACTAGATTGTGTATTTCGAAGCAGCTTGCAAATGCAGTCACATATCTCCATACAGCCTTCCCCAGACCCATCATTCATAAAAACCTCATGCCCACAAGTATTTTCTTGGACCAGGACTTTGCCCCCAAATTATTTGACTTCTCAATTTCCGTAACCATTCCTCCTGAGCAATCACATGTCTATGAAAGCAGCGGGGGTGGACTGGTCGGGTACCTTGACCCTGTGTATATGAGGTCTGGTTACATTACAGAAAAGACTGATGTTTATAACTTTGGTGTCATTTTACTTGTTTTCTTGAGTGGACGACGTCCTGTTCATCTAAATCAAGCAGTAGAAGAATTCAAACTTGTGTCAGATGTGAGATTACATGCTTCTGATGACCAGTTCCTTACGATTGTGGATCCTAAAATACTTGAGGAGTTAAAAGGAGAAGATGAACAACCACAACAGCAGCAGTTGCATGATTTCCTAGCACTGGCATTGTTATGCACTCAAGAGGAAAGTGAACCAAGGCCAGATATGATCGATGTGGCCAAAGAACTTGTACGAATTGAGAAGTCTATCAATCCTTGTTAG

Protein Analysis

344

Amino Acids

39.01

Weight (kDa)

5.79

Isoelectric Point (pI)

46.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 94 - 273 7.9e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 102 - 334 3.5e-19 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 305, 726
AatII GACGTC 1 cut(s) 769
Acc65I GGTACC 1 cut(s) 669
AccB1I GGYRCC 1 cut(s) 669
AciI CCGC 1 cut(s) 651
AclWI GGATC 3 cut(s) 96, 854, 867
AcoI YGGCCR 1 cut(s) 990
AcsI RAATTY 2 cut(s) 255, 797
AcyI GRCGYC 1 cut(s) 766
AfaI GTAC 4 cut(s) 20, 375, 671, 1005
AfiI CCNNNNNNNGG 2 cut(s) 453, 934
AflIII ACRYGT 1 cut(s) 634
AgsI TTSAA 3 cut(s) 261, 343, 802
AjnI CCWGG 1 cut(s) 570
AluBI AGCT 2 cut(s) 380, 484
AluI AGCT 2 cut(s) 380, 484
Alw21I GWGCWC 1 cut(s) 326
AlwI GGATC 3 cut(s) 96, 854, 867
AoxI GGCC 3 cut(s) 420, 971, 990
ApeKI GCWGC 6 cut(s) 354, 357, 398, 481, 648, 910
ApoI RAATTY 2 cut(s) 255, 797
ArsI GACNNNNNNTTYG 2 cut(s) 560, 592
AseI ATTAAT 1 cut(s) 243
Asp718I GGTACC 1 cut(s) 669
AspS9I GGNCC 2 cut(s) 420, 568
AsuC2I CCSGG 1 cut(s) 419
AsuII TTCGAA 1 cut(s) 476
AvaII GGWCC 1 cut(s) 568
BaeGI GKGCMC 1 cut(s) 276
BalI TGGCCA 1 cut(s) 992
BamHI GGATCC 1 cut(s) 859
BanI GGYRCC 1 cut(s) 669
Bbv12I GWGCWC 1 cut(s) 326
BbvI GCAGC 6 cut(s) 341, 344, 410, 493, 660, 922
BccI CCATC 3 cut(s) 101, 180, 536
BciT130I CCWGG 1 cut(s) 572
BcnI CCSGG 1 cut(s) 419
BfaI CTAG 4 cut(s) 192, 221, 462, 929
BisI GCNGC 6 cut(s) 355, 358, 399, 482, 649, 911
BlsI GCNGC 6 cut(s) 356, 359, 400, 483, 650, 912
Bme1390I CCNGG 2 cut(s) 419, 572
Bme18I GGWCC 1 cut(s) 568
BmgT120I GGNCC 2 cut(s) 420, 568
BmiI GGNNCC 2 cut(s) 671, 861
BmrFI CCNGG 2 cut(s) 419, 572
Bpu10I CCTNAGC 1 cut(s) 624
Bpu14I TTCGAA 1 cut(s) 476
BpuEI CTTGAG 4 cut(s) 298, 775, 893, 936
BpuMI CCSGG 1 cut(s) 419
Bsa29I ATCGAT 1 cut(s) 984
BsaHI GRCGYC 1 cut(s) 766
BsaJI CCNNGG 2 cut(s) 452, 968
BsaXI ACNNNNNCTCC 2 cut(s) 604, 634
Bsc4I CCNNNNNNNGG 2 cut(s) 453, 934
Bse1I ACTGG 3 cut(s) 666, 841, 939
BseBI CCWGG 1 cut(s) 572
BseCI ATCGAT 1 cut(s) 984
BseDI CCNNGG 2 cut(s) 452, 968
BseGI GGATG 1 cut(s) 172
BseLI CCNNNNNNNGG 2 cut(s) 453, 934
BseMII CTCAG 1 cut(s) 615
BseNI ACTGG 3 cut(s) 666, 841, 939
BseRI GAGGAG 1 cut(s) 890
BseSI GKGCMC 1 cut(s) 276
BseXI GCAGC 6 cut(s) 341, 344, 410, 493, 660, 922
BshFI GGCC 3 cut(s) 422, 973, 992
BshNI GGYRCC 1 cut(s) 669
BshVI ATCGAT 1 cut(s) 984
BsiHKAI GWGCWC 1 cut(s) 326
BsiSI CCGG 2 cut(s) 418, 423
BslFI GGGAC 1 cut(s) 430
BslI CCNNNNNNNGG 2 cut(s) 453, 934
BsmFI GGGAC 1 cut(s) 430
BsnI GGCC 3 cut(s) 422, 973, 992
Bsp119I TTCGAA 1 cut(s) 476
Bsp1286I GDGCHC 2 cut(s) 276, 326
Bsp143I GATC 3 cut(s) 88, 859, 981
Bsp19I CCATGG 1 cut(s) 452
BspACI CCGC 1 cut(s) 651
BspANI GGCC 3 cut(s) 422, 973, 992
BspCNI CTCAG 1 cut(s) 616
BspDI ATCGAT 1 cut(s) 984
BspLI GGNNCC 2 cut(s) 671, 861
BspPI GGATC 3 cut(s) 96, 854, 867
BspT104I TTCGAA 1 cut(s) 476
BspT107I GGYRCC 1 cut(s) 669
BsrI ACTGG 3 cut(s) 666, 841, 939
BssECI CCNNGG 2 cut(s) 452, 968
BssMI GATC 3 cut(s) 88, 859, 981
BssNI GRCGYC 1 cut(s) 766
BssT1I CCWWGG 2 cut(s) 452, 968
Bst2UI CCWGG 1 cut(s) 572
Bst4CI ACNGT 2 cut(s) 203, 348
BstACI GRCGYC 1 cut(s) 766
BstAPI GCANNNNNTGC 1 cut(s) 916
BstBI TTCGAA 1 cut(s) 476
BstC8I GCNNGC 1 cut(s) 486
BstDEI CTNAG 2 cut(s) 361, 624
BstDSI CCRYGG 1 cut(s) 452
BstF5I GGATG 1 cut(s) 172
BstKTI GATC 3 cut(s) 91, 862, 984
BstMBI GATC 3 cut(s) 88, 859, 981
BstMWI GCNNNNNNNGC 1 cut(s) 916
BstNI CCWGG 1 cut(s) 572
BstNSI RCATGY 2 cut(s) 638, 830
BstSCI CCNGG 2 cut(s) 417, 570
BstSLI GKGCMC 1 cut(s) 276
BstV1I GCAGC 6 cut(s) 341, 344, 410, 493, 660, 922
BstX2I RGATCY 2 cut(s) 88, 859
BstYI RGATCY 2 cut(s) 88, 859
Bsu15I ATCGAT 1 cut(s) 984
BsuRI GGCC 3 cut(s) 422, 973, 992
BsuTUI ATCGAT 1 cut(s) 984
BtgI CCRYGG 1 cut(s) 452
BtsCI GGATG 1 cut(s) 172
BtsIMutI CAGTG 1 cut(s) 932
Cac8I GCNNGC 1 cut(s) 486
Cfr13I GGNCC 2 cut(s) 420, 568
ClaI ATCGAT 1 cut(s) 984
Csp6I GTAC 4 cut(s) 19, 374, 670, 1004
CviAII CATG 7 cut(s) 33, 389, 453, 547, 635, 827, 920
CviQI GTAC 4 cut(s) 19, 374, 670, 1004
DdeI CTNAG 2 cut(s) 361, 624
DpnI GATC 3 cut(s) 90, 861, 983
DpnII GATC 3 cut(s) 88, 859, 981
EaeI YGGCCR 1 cut(s) 990
Eco130I CCWWGG 2 cut(s) 452, 968
Eco47I GGWCC 1 cut(s) 568
EcoRI GAATTC 1 cut(s) 797
EcoRII CCWGG 1 cut(s) 570
EcoT14I CCWWGG 2 cut(s) 452, 968
ErhI CCWWGG 2 cut(s) 452, 968
FaeI CATG 7 cut(s) 36, 392, 456, 550, 638, 830, 923
FaqI GGGAC 1 cut(s) 430
FatI CATG 7 cut(s) 32, 388, 452, 546, 634, 826, 919
FauI CCCGC 1 cut(s) 644
Fnu4HI GCNGC 6 cut(s) 355, 358, 399, 482, 649, 911
FokI GGATG 1 cut(s) 159
Fsp4HI GCNGC 6 cut(s) 355, 358, 399, 482, 649, 911
FspBI CTAG 4 cut(s) 192, 221, 462, 929
GluI GCNGC 6 cut(s) 355, 358, 399, 482, 649, 911
HaeIII GGCC 3 cut(s) 422, 973, 992
HapII CCGG 2 cut(s) 418, 423
Hin1I GRCGYC 1 cut(s) 766
Hin1II CATG 7 cut(s) 36, 392, 456, 550, 638, 830, 923
HinfI GANTC 1 cut(s) 443
HpaII CCGG 2 cut(s) 418, 423
Hpy166II GTNNAC 3 cut(s) 659, 761, 965
Hpy188I TCNGA 3 cut(s) 93, 814, 835
Hpy188III TCNNGA 5 cut(s) 221, 296, 623, 754, 953
Hpy8I GTNNAC 3 cut(s) 659, 761, 965
Hpy99I CGWCG 1 cut(s) 768
HpyAV CCTTC 2 cut(s) 186, 526
HpyCH4III ACNGT 2 cut(s) 203, 348
HpyCH4IV ACGT 1 cut(s) 766
HpyCH4V TGCA 7 cut(s) 316, 388, 398, 488, 494, 919, 948
HpyF10VI GCNNNNNNNGC 1 cut(s) 916
HpyF3I CTNAG 2 cut(s) 361, 624
HpySE526I ACGT 1 cut(s) 766
Hsp92I GRCGYC 1 cut(s) 766
Hsp92II CATG 7 cut(s) 36, 392, 456, 550, 638, 830, 923
KpnI GGTACC 1 cut(s) 673
Kzo9I GATC 3 cut(s) 88, 859, 981
Lsp1109I GCAGC 6 cut(s) 341, 344, 410, 493, 660, 922
MaeI CTAG 4 cut(s) 192, 221, 462, 929
MaeII ACGT 1 cut(s) 766
MaeIII GTNAC 4 cut(s) 296, 496, 610, 698
MalI GATC 3 cut(s) 90, 861, 983
MboI GATC 3 cut(s) 88, 859, 981
MboII GAAGA 2 cut(s) 806, 902
MflI RGATCY 2 cut(s) 88, 859
MhlI GDGCHC 2 cut(s) 276, 326
MlsI TGGCCA 1 cut(s) 992
MluCI AATT 7 cut(s) 52, 77, 255, 587, 603, 797, 1008
MluNI TGGCCA 1 cut(s) 992
MlyI GAGTC 1 cut(s) 452
Mox20I TGGCCA 1 cut(s) 992
MscI TGGCCA 1 cut(s) 992
MseI TTAA 2 cut(s) 243, 881
MslI CAYNNNNRTG 4 cut(s) 333, 393, 639, 943
Msp20I TGGCCA 1 cut(s) 992
MspA1I CMGCKG 1 cut(s) 651
MspI CCGG 2 cut(s) 418, 423
MspR9I CCNGG 2 cut(s) 419, 572
MvaI CCWGG 1 cut(s) 572
MwoI GCNNNNNNNGC 1 cut(s) 916
NciI CCSGG 1 cut(s) 419
NcoI CCATGG 1 cut(s) 452
NdeII GATC 3 cut(s) 88, 859, 981
NlaIII CATG 7 cut(s) 36, 392, 456, 550, 638, 830, 923
NlaIV GGNNCC 2 cut(s) 671, 861
NmuCI GTSAC 2 cut(s) 296, 496
NspI RCATGY 2 cut(s) 638, 830
NspV TTCGAA 1 cut(s) 476
PciI ACATGT 1 cut(s) 634
PflFI GACNNNGTC 1 cut(s) 765
PkrI GCNGC 6 cut(s) 356, 359, 400, 483, 650, 912
PleI GAGTC 1 cut(s) 451
PpsI GAGTC 1 cut(s) 451
PscI ACATGT 1 cut(s) 634
PshBI ATTAAT 1 cut(s) 243
PsiI TTATAA 2 cut(s) 305, 726
Psp6I CCWGG 1 cut(s) 570
PspGI CCWGG 1 cut(s) 570
PspN4I GGNNCC 2 cut(s) 671, 861
PspPI GGNCC 2 cut(s) 420, 568
PsuI RGATCY 2 cut(s) 88, 859
PsyI GACNNNGTC 1 cut(s) 765
RsaI GTAC 4 cut(s) 20, 375, 671, 1005
RsaNI GTAC 4 cut(s) 19, 374, 670, 1004
RseI CAYNNNNRTG 4 cut(s) 333, 393, 639, 943
SaqAI TTAA 2 cut(s) 243, 881
SatI GCNGC 6 cut(s) 355, 358, 399, 482, 649, 911
Sau3AI GATC 3 cut(s) 88, 859, 981
Sau96I GGNCC 2 cut(s) 420, 568
SchI GAGTC 1 cut(s) 452
ScrFI CCNGG 2 cut(s) 419, 572
SduI GDGCHC 2 cut(s) 276, 326
SetI ASST 7 cut(s) 382, 430, 486, 546, 675, 695, 769
SfuI TTCGAA 1 cut(s) 476
SinI GGWCC 1 cut(s) 568
SmiMI CAYNNNNRTG 4 cut(s) 333, 393, 639, 943
SmlI CTYRAG 4 cut(s) 277, 754, 872, 951
SmoI CTYRAG 4 cut(s) 277, 754, 872, 951
Sse9I AATT 7 cut(s) 52, 77, 255, 587, 603, 797, 1008
SsiI CCGC 1 cut(s) 651
SspMI CTAG 4 cut(s) 192, 221, 462, 929
StyD4I CCNGG 2 cut(s) 417, 570
StyI CCWWGG 2 cut(s) 452, 968
TaaI ACNGT 2 cut(s) 203, 348
TaiI ACGT 1 cut(s) 769
TaqI TCGA 2 cut(s) 476, 984
TasI AATT 7 cut(s) 52, 77, 255, 587, 603, 797, 1008
TatI WGTACW 1 cut(s) 18
Tru1I TTAA 2 cut(s) 243, 881
Tru9I TTAA 2 cut(s) 243, 881
TscAI CASTG 1 cut(s) 939
TseFI GTSAC 2 cut(s) 296, 496
TseI GCWGC 6 cut(s) 354, 357, 398, 481, 648, 910
Tsp45I GTSAC 2 cut(s) 296, 496
TspDTI ATGAA 6 cut(s) 159, 405, 524, 657, 764, 909
TspGWI ACGGA 1 cut(s) 598
TspRI CASTG 1 cut(s) 939
Tth111I GACNNNGTC 1 cut(s) 765
VpaK11BI GGWCC 1 cut(s) 568
VspI ATTAAT 1 cut(s) 243
XapI RAATTY 2 cut(s) 255, 797
XbaI TCTAGA 1 cut(s) 220
XceI RCATGY 2 cut(s) 638, 830
XspI CTAG 4 cut(s) 192, 221, 462, 929
ZraI GACGTC 1 cut(s) 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.