Rmu_sc0002553.1_g000033

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002553.1
Physical Location & Seq
Forward (+)
142260 .. 142985
726 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002553.1_g000033.1.cds

Sequence Viewer

Length: 726 bp
atgcagatgagcactcataagaatgttttgaaattgttgggctgctgcttagagttccccataccagctttagtgcttgaacatgcaggcaaaggagttctcaatgctgtaggaggtttgggggttaatgactccttaaactggaaaactagattgcgtgttgcaaagcagcttgctaatgctattacatatcttcatacagccttccccagacccatcattcataggaacctaaaacacagctgtatttttttggacgatgagtttgttcccaaaatctctgacttctctgactccataaccattcctcctgagcaatcacatgttgaagatcttgtgaaagggacatttgggtaccttgaccctgcgtatgcggagtctgagtgcattacagaaaagactgatgtttatagctttggtgtcatgttacttgttttcttgagtggacgatatgctattcaacgaaatcaaactgcagaaaagtgggagtcccttgtgtcatatgtaaaattacatgcttgtgatgaccagtttcagatgattgttgaccctaaaatactcgagggtttaggaggagaagatgagcaagcacaacaaaaacagttgcatgagttcctatcactggcattgttatgcactcaagacaaaagtgaagcaaggccagatatgatcgatgtggccaaggaacttgtacgaattgagaagtctacctttcctcctcgctag

Protein Analysis

241

Amino Acids

27.09

Weight (kDa)

5.62

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 354
AccB1I GGYRCC 1 cut(s) 354
AccI GTMKAC 1 cut(s) 707
AciI CCGC 1 cut(s) 374
AcoI YGGCCR 1 cut(s) 678
AfaI GTAC 2 cut(s) 356, 693
AfiI CCNNNNNNNGG 2 cut(s) 141, 622
AflIII ACRYGT 1 cut(s) 322
AgsI TTSAA 4 cut(s) 31, 80, 329, 461
AluBI AGCT 4 cut(s) 68, 172, 243, 414
AluI AGCT 4 cut(s) 68, 172, 243, 414
Alw21I GWGCWC 1 cut(s) 14
Ama87I CYCGRG 1 cut(s) 560
AoxI GGCC 2 cut(s) 659, 678
ApeKI GCWGC 3 cut(s) 42, 45, 169
ArsI GACNNNNNNTTYG 2 cut(s) 248, 280
Asp718I GGTACC 1 cut(s) 354
AvaI CYCGRG 1 cut(s) 560
BalI TGGCCA 1 cut(s) 680
BanI GGYRCC 1 cut(s) 354
Bbv12I GWGCWC 1 cut(s) 14
BbvI GCAGC 3 cut(s) 29, 32, 181
BccI CCATC 1 cut(s) 224
BfaI CTAG 2 cut(s) 150, 724
BfmI CTRYAG 2 cut(s) 108, 474
BglII AGATCT 1 cut(s) 331
BisI GCNGC 3 cut(s) 43, 46, 170
BlsI GCNGC 3 cut(s) 44, 47, 171
BmeT110I CYCGRG 1 cut(s) 560
BmiI GGNNCC 2 cut(s) 230, 356
Bpu10I CCTNAGC 1 cut(s) 312
BpuEI CTTGAG 2 cut(s) 460, 624
Bsa29I ATCGAT 1 cut(s) 672
BsaJI CCNNGG 1 cut(s) 681
BsaXI ACNNNNNCTCC 5 cut(s) 292, 322, 368, 398, 700
Bsc4I CCNNNNNNNGG 2 cut(s) 141, 622
Bse1I ACTGG 3 cut(s) 146, 529, 627
BseCI ATCGAT 1 cut(s) 672
BseDI CCNNGG 1 cut(s) 681
BseLI CCNNNNNNNGG 2 cut(s) 141, 622
BseMII CTCAG 2 cut(s) 303, 372
BseNI ACTGG 3 cut(s) 146, 529, 627
BseRI GAGGAG 2 cut(s) 588, 708
BseXI GCAGC 3 cut(s) 29, 32, 181
BshFI GGCC 2 cut(s) 661, 680
BshNI GGYRCC 1 cut(s) 354
BshVI ATCGAT 1 cut(s) 672
BsiHKAI GWGCWC 1 cut(s) 14
BsiHKCI CYCGRG 1 cut(s) 560
BslFI GGGAC 2 cut(s) 358, 475
BslI CCNNNNNNNGG 2 cut(s) 141, 622
BsmFI GGGAC 2 cut(s) 358, 475
BsnI GGCC 2 cut(s) 661, 680
BsoBI CYCGRG 1 cut(s) 560
Bsp1286I GDGCHC 1 cut(s) 14
Bsp143I GATC 2 cut(s) 331, 669
BspACI CCGC 1 cut(s) 374
BspANI GGCC 2 cut(s) 661, 680
BspCNI CTCAG 2 cut(s) 304, 373
BspDI ATCGAT 1 cut(s) 672
BspLI GGNNCC 2 cut(s) 230, 356
BspMAI CTGCAG 1 cut(s) 478
BspT107I GGYRCC 1 cut(s) 354
BsrI ACTGG 3 cut(s) 146, 529, 627
BssECI CCNNGG 1 cut(s) 681
BssMI GATC 2 cut(s) 331, 669
BssT1I CCWWGG 1 cut(s) 681
Bst4CI ACNGT 1 cut(s) 603
BstC8I GCNNGC 3 cut(s) 88, 174, 588
BstDEI CTNAG 3 cut(s) 49, 312, 381
BstKTI GATC 2 cut(s) 334, 672
BstMBI GATC 2 cut(s) 331, 669
BstNSI RCATGY 3 cut(s) 86, 326, 518
BstSFI CTRYAG 2 cut(s) 108, 474
BstV1I GCAGC 3 cut(s) 29, 32, 181
BstX2I RGATCY 1 cut(s) 331
BstYI RGATCY 1 cut(s) 331
Bsu15I ATCGAT 1 cut(s) 672
BsuRI GGCC 2 cut(s) 661, 680
BsuTUI ATCGAT 1 cut(s) 672
BtsIMutI CAGTG 1 cut(s) 620
Cac8I GCNNGC 3 cut(s) 88, 174, 588
ClaI ATCGAT 1 cut(s) 672
Csp6I GTAC 2 cut(s) 355, 692
CviAII CATG 5 cut(s) 83, 323, 424, 515, 608
CviJI RGCY 8 cut(s) 42, 68, 172, 203, 243, 414, 661, 680
CviKI_1 RGCY 8 cut(s) 42, 68, 172, 203, 243, 414, 661, 680
CviQI GTAC 2 cut(s) 355, 692
DdeI CTNAG 3 cut(s) 49, 312, 381
DpnI GATC 2 cut(s) 333, 671
DpnII GATC 2 cut(s) 331, 669
EaeI YGGCCR 1 cut(s) 678
Eco130I CCWWGG 1 cut(s) 681
Eco88I CYCGRG 1 cut(s) 560
EcoT14I CCWWGG 1 cut(s) 681
ErhI CCWWGG 1 cut(s) 681
FaeI CATG 5 cut(s) 86, 326, 427, 518, 611
FalI AAGNNNNNCTT 1 cut(s) 695
FaqI GGGAC 2 cut(s) 358, 475
FatI CATG 5 cut(s) 82, 322, 423, 514, 607
FauNDI CATATG 1 cut(s) 502
FblI GTMKAC 1 cut(s) 707
Fnu4HI GCNGC 3 cut(s) 43, 46, 170
Fsp4HI GCNGC 3 cut(s) 43, 46, 170
FspBI CTAG 2 cut(s) 150, 724
GluI GCNGC 3 cut(s) 43, 46, 170
HaeIII GGCC 2 cut(s) 661, 680
Hin1II CATG 5 cut(s) 86, 326, 427, 518, 611
HincII GTYRAC 1 cut(s) 547
HindII GTYRAC 1 cut(s) 547
HinfI GANTC 4 cut(s) 131, 293, 377, 488
Hpy166II GTNNAC 3 cut(s) 446, 547, 708
Hpy188I TCNGA 4 cut(s) 283, 292, 382, 537
Hpy188III TCNNGA 3 cut(s) 311, 439, 641
Hpy8I GTNNAC 3 cut(s) 446, 547, 708
HpyAV CCTTC 1 cut(s) 214
HpyCH4III ACNGT 1 cut(s) 603
HpyCH4V TGCA 7 cut(s) 4, 86, 164, 387, 476, 607, 636
HpyF3I CTNAG 3 cut(s) 49, 312, 381
Hsp92II CATG 5 cut(s) 86, 326, 427, 518, 611
KpnI GGTACC 1 cut(s) 358
Kzo9I GATC 2 cut(s) 331, 669
LpnPI CCDG 9 cut(s) 72, 78, 127, 223, 324, 378, 542, 608, 675
Lsp1109I GCAGC 3 cut(s) 29, 32, 181
MaeI CTAG 2 cut(s) 150, 724
MaeIII GTNAC 1 cut(s) 426
MalI GATC 2 cut(s) 333, 671
MboI GATC 2 cut(s) 331, 669
MboII GAAGA 3 cut(s) 185, 341, 590
MflI RGATCY 1 cut(s) 331
MhlI GDGCHC 1 cut(s) 14
MlsI TGGCCA 1 cut(s) 680
MluCI AATT 3 cut(s) 32, 509, 696
MluNI TGGCCA 1 cut(s) 680
MlyI GAGTC 4 cut(s) 125, 287, 386, 497
MnlI CCTC 5 cut(s) 107, 318, 556, 566, 726
Mox20I TGGCCA 1 cut(s) 680
MscI TGGCCA 1 cut(s) 680
MseI TTAA 2 cut(s) 126, 137
MslI CAYNNNNRTG 3 cut(s) 21, 519, 631
Msp20I TGGCCA 1 cut(s) 680
MspA1I CMGCKG 1 cut(s) 243
NdeI CATATG 1 cut(s) 502
NdeII GATC 2 cut(s) 331, 669
NlaIII CATG 5 cut(s) 86, 326, 427, 518, 611
NlaIV GGNNCC 2 cut(s) 230, 356
NspI RCATGY 3 cut(s) 86, 326, 518
PaeR7I CTCGAG 1 cut(s) 560
PciI ACATGT 1 cut(s) 322
PkrI GCNGC 3 cut(s) 44, 47, 171
PleI GAGTC 4 cut(s) 125, 287, 385, 496
PpsI GAGTC 4 cut(s) 125, 287, 385, 496
PscI ACATGT 1 cut(s) 322
PspN4I GGNNCC 2 cut(s) 230, 356
PspXI VCTCGAGB 1 cut(s) 560
PstI CTGCAG 1 cut(s) 478
PsuI RGATCY 1 cut(s) 331
PvuII CAGCTG 1 cut(s) 243
RsaI GTAC 2 cut(s) 356, 693
RsaNI GTAC 2 cut(s) 355, 692
RseI CAYNNNNRTG 3 cut(s) 21, 519, 631
SaqAI TTAA 2 cut(s) 126, 137
SatI GCNGC 3 cut(s) 43, 46, 170
Sau3AI GATC 2 cut(s) 331, 669
SchI GAGTC 4 cut(s) 125, 287, 386, 497
SduI GDGCHC 1 cut(s) 14
SetI ASST 8 cut(s) 70, 118, 174, 234, 245, 360, 416, 713
SfcI CTRYAG 2 cut(s) 108, 474
Sfr274I CTCGAG 1 cut(s) 560
SlaI CTCGAG 1 cut(s) 560
SmiMI CAYNNNNRTG 3 cut(s) 21, 519, 631
SmlI CTYRAG 3 cut(s) 439, 560, 639
SmoI CTYRAG 3 cut(s) 439, 560, 639
Sse9I AATT 3 cut(s) 32, 509, 696
SsiI CCGC 1 cut(s) 374
SspMI CTAG 2 cut(s) 150, 724
StyI CCWWGG 1 cut(s) 681
TaaI ACNGT 1 cut(s) 603
TaqI TCGA 2 cut(s) 561, 672
TasI AATT 3 cut(s) 32, 509, 696
Tru1I TTAA 2 cut(s) 126, 137
Tru9I TTAA 2 cut(s) 126, 137
TscAI CASTG 1 cut(s) 627
TseI GCWGC 3 cut(s) 42, 45, 169
TspDTI ATGAA 2 cut(s) 185, 212
TspRI CASTG 1 cut(s) 627
XceI RCATGY 3 cut(s) 86, 326, 518
XhoI CTCGAG 1 cut(s) 560
XmiI GTMKAC 1 cut(s) 707
XspI CTAG 2 cut(s) 150, 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.