Rw6G004710

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
7751473 .. 7752733
1261 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G004710.1

Sequence Viewer

Length: 1047 bp
ATGTTGTTTTCGTTGCTTGCGTGTTTGAGAAAGGAGGAACGAGATACTGATGGATCCTCATTCTTGATAAATGGAAGCAAAGTACTAGAGGATCTCATTGTTTCTTTTGATGGAAAATCTAATCCTATTCGCAATTACTCTGCTGATGAGCTCATCAAGGCAACCGACAACTTTGATGCTTCTTGCATTATGCAAGAATGTAGGATCTACAAAATGTTCAGTGGTGTTCTAGACGATCGACCTATTATCATTAAGAAGTACTTCACGTGGAGCTGGCTCAATGAGGATGCAGTAAGATCTCTAGCTATTCGTGACATTATCATTTCAACACAGATGAGCAACCATAATAATGTTTTAAAACTTTTGGGATGCTGCTTAGAGTTTCCTATACCAGCTCTGGTGCATGAATATGTAACAATAGGAGTGCTAAATGATGAAGGAGGTTTCGGAGCTAGTGAATCCTTAACCTGGAAAGCTAGACTAGGTATAGCGAAGCAGCTTGCAAATGCTCTTACATATCTCCATACCGCCTTTCCTAGGCCCATCATTCTCCGGGATCTAAATTTTAGTTGTATTTACTTGGGCCATGATTATGTTCCCAAACTCTCCTACTTCGGGCTCTCCATAACCATCCCTCCCATGAAATCATATGCTGAAGATGAACCAAAAGGAAGATTTGGGTACCTTGACCCTGCTTACATTAAATCTGGTATTATTTCAGAGAAAGGTGATGTTTATAGCTTTGGTGTGCTTTTACTTATATTTCTAACAGGAAAAAAAGCTGTGGTTACCAATCAGGACGGGGAATACGAATCAATTAATTCATATGTGAAATTTCATACTTGTAATGGTCAGATTCAGAGCATTGTTGATCCTAAAATCTTTGGCGAGGTAGGGAAAGATGAGCAAGTACAACAGCACTTGCAAGATTTCGTAGCACTGGCATTATTATGCACTCAAGCATCAAATGAAAATGAACGGCCAGATATGATCAATGTATCAAAAGAGCTGGAAAGGATTCAGAAGTCTACCTTTCCTGGTTGCTAG

Protein Analysis

348

Amino Acids

39.07

Weight (kDa)

5.38

Isoelectric Point (pI)

28.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 100 - 312 5.9e-16 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 104 - 270 6.5e-18 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 681
AccB1I GGYRCC 1 cut(s) 681
AccI GTMKAC 1 cut(s) 1028
AciI CCGC 1 cut(s) 528
AclWI GGATC 6 cut(s) 48, 61, 99, 212, 564, 866
AcoI YGGCCR 1 cut(s) 980
AcsI RAATTY 2 cut(s) 562, 833
AcuI CTGAAG 1 cut(s) 675
AcvI CACGTG 1 cut(s) 267
AfaI GTAC 4 cut(s) 84, 260, 683, 912
AfiI CCNNNNNNNGG 3 cut(s) 468, 537, 615
AgsI TTSAA 1 cut(s) 327
AjnI CCWGG 2 cut(s) 467, 1036
Alw21I GWGCWC 1 cut(s) 153
AlwI GGATC 6 cut(s) 48, 61, 99, 212, 564, 866
AoxI GGCC 3 cut(s) 539, 583, 980
ApeKI GCWGC 2 cut(s) 372, 496
ApoI RAATTY 2 cut(s) 562, 833
AseI ATTAAT 1 cut(s) 819
Asp700I GAANNNNTTC 2 cut(s) 260, 1017
Asp718I GGTACC 1 cut(s) 681
AspA2I CCTAGG 1 cut(s) 536
AspS9I GGNCC 2 cut(s) 540, 583
AsuC2I CCSGG 1 cut(s) 554
AsuHPI GGTGA 1 cut(s) 740
AvrII CCTAGG 1 cut(s) 536
BamHI GGATCC 1 cut(s) 53
BanI GGYRCC 1 cut(s) 681
BanII GRGCYC 2 cut(s) 153, 621
BbrPI CACGTG 1 cut(s) 267
Bbv12I GWGCWC 1 cut(s) 153
BbvI GCAGC 2 cut(s) 359, 508
BccI CCATC 4 cut(s) 44, 104, 551, 638
BceAI ACGGC 1 cut(s) 995
BciT130I CCWGG 2 cut(s) 469, 1038
BclI TGATCA 1 cut(s) 990
BcnI CCSGG 1 cut(s) 554
BfaI CTAG 8 cut(s) 86, 230, 302, 453, 477, 482, 537, 1045
BglII AGATCT 1 cut(s) 296
BisI GCNGC 2 cut(s) 373, 497
BlnI CCTAGG 1 cut(s) 536
BlsI GCNGC 2 cut(s) 374, 498
BmcAI AGTACT 2 cut(s) 84, 260
Bme1390I CCNGG 3 cut(s) 469, 554, 1038
BmgT120I GGNCC 2 cut(s) 540, 583
BmiI GGNNCC 2 cut(s) 55, 683
BmrFI CCNGG 3 cut(s) 469, 554, 1038
BmsI GCATC 4 cut(s) 166, 277, 359, 971
BpuEI CTTGAG 1 cut(s) 942
BpuMI CCSGG 1 cut(s) 554
BsaAI YACGTR 1 cut(s) 267
BsaJI CCNNGG 1 cut(s) 536
BsaXI ACNNNNNCTCC 2 cut(s) 619, 649
Bsc4I CCNNNNNNNGG 3 cut(s) 468, 537, 615
Bse1I ACTGG 1 cut(s) 945
BseBI CCWGG 2 cut(s) 469, 1038
BseDI CCNNGG 1 cut(s) 536
BseGI GGATG 3 cut(s) 292, 374, 630
BseLI CCNNNNNNNGG 3 cut(s) 468, 537, 615
BseNI ACTGG 1 cut(s) 945
BseXI GCAGC 2 cut(s) 359, 508
Bsh1285I CGRYCG 1 cut(s) 238
BshFI GGCC 3 cut(s) 541, 585, 982
BshNI GGYRCC 1 cut(s) 681
BsiEI CGRYCG 1 cut(s) 238
BsiHKAI GWGCWC 1 cut(s) 153
BsiSI CCGG 1 cut(s) 553
BslI CCNNNNNNNGG 3 cut(s) 468, 537, 615
BsnI GGCC 3 cut(s) 541, 585, 982
Bsp1286I GDGCHC 2 cut(s) 153, 621
Bsp143I GATC 8 cut(s) 53, 91, 204, 235, 296, 556, 871, 990
BspACI CCGC 1 cut(s) 528
BspANI GGCC 3 cut(s) 541, 585, 982
BspLI GGNNCC 2 cut(s) 55, 683
BspPI GGATC 6 cut(s) 48, 61, 99, 212, 564, 866
BspT107I GGYRCC 1 cut(s) 681
BsrI ACTGG 1 cut(s) 945
BssECI CCNNGG 1 cut(s) 536
BssMI GATC 8 cut(s) 53, 91, 204, 235, 296, 556, 871, 990
BssT1I CCWWGG 1 cut(s) 536
Bst2UI CCWGG 2 cut(s) 469, 1038
BstBAI YACGTR 1 cut(s) 267
BstC8I GCNNGC 3 cut(s) 18, 275, 501
BstDEI CTNAG 1 cut(s) 376
BstEII GGTNACC 1 cut(s) 787
BstENI CCTNNNNNAGG 1 cut(s) 535
BstF5I GGATG 3 cut(s) 292, 374, 630
BstKTI GATC 8 cut(s) 56, 94, 207, 238, 299, 559, 874, 993
BstMBI GATC 8 cut(s) 53, 91, 204, 235, 296, 556, 871, 990
BstMCI CGRYCG 1 cut(s) 238
BstNI CCWGG 2 cut(s) 469, 1038
BstPI GGTNACC 1 cut(s) 787
BstSCI CCNGG 3 cut(s) 467, 552, 1036
BstV1I GCAGC 2 cut(s) 359, 508
BstX2I RGATCY 5 cut(s) 53, 91, 204, 296, 556
BstYI RGATCY 5 cut(s) 53, 91, 204, 296, 556
BsuRI GGCC 3 cut(s) 541, 585, 982
BtsCI GGATG 3 cut(s) 292, 374, 630
BtsIMutI CAGTG 2 cut(s) 226, 938
Cac8I GCNNGC 3 cut(s) 18, 275, 501
Cfr13I GGNCC 2 cut(s) 540, 583
Csp6I GTAC 4 cut(s) 83, 259, 682, 911
CviAII CATG 3 cut(s) 404, 587, 640
CviQI GTAC 4 cut(s) 83, 259, 682, 911
DdeI CTNAG 1 cut(s) 376
DpnI GATC 8 cut(s) 55, 93, 206, 237, 298, 558, 873, 992
DpnII GATC 8 cut(s) 53, 91, 204, 235, 296, 556, 871, 990
DraI TTTAAA 1 cut(s) 357
EaeI YGGCCR 1 cut(s) 980
Ecl136II GAGCTC 1 cut(s) 151
Eco130I CCWWGG 1 cut(s) 536
Eco24I GRGCYC 2 cut(s) 153, 621
Eco53kI GAGCTC 1 cut(s) 151
Eco57I CTGAAG 1 cut(s) 675
Eco72I CACGTG 1 cut(s) 267
Eco91I GGTNACC 1 cut(s) 787
EcoICRI GAGCTC 1 cut(s) 151
EcoNI CCTNNNNNAGG 1 cut(s) 535
EcoO65I GGTNACC 1 cut(s) 787
EcoRII CCWGG 2 cut(s) 467, 1036
EcoT14I CCWWGG 1 cut(s) 536
EcoT38I GRGCYC 2 cut(s) 153, 621
ErhI CCWWGG 1 cut(s) 536
FaeI CATG 3 cut(s) 407, 590, 643
FalI AAGNNNNNCTT 3 cut(s) 245, 277, 1016
FatI CATG 3 cut(s) 403, 586, 639
FauNDI CATATG 2 cut(s) 649, 826
FbaI TGATCA 1 cut(s) 990
FblI GTMKAC 1 cut(s) 1028
Fnu4HI GCNGC 2 cut(s) 373, 497
FokI GGATG 3 cut(s) 299, 381, 617
FriOI GRGCYC 2 cut(s) 153, 621
Fsp4HI GCNGC 2 cut(s) 373, 497
FspBI CTAG 8 cut(s) 86, 230, 302, 453, 477, 482, 537, 1045
GluI GCNGC 2 cut(s) 373, 497
HaeIII GGCC 3 cut(s) 541, 585, 982
HapII CCGG 1 cut(s) 553
Hin1II CATG 3 cut(s) 407, 590, 643
HinfI GANTC 4 cut(s) 458, 812, 856, 1018
HpaII CCGG 1 cut(s) 553
HphI GGTGA 1 cut(s) 740
Hpy166II GTNNAC 1 cut(s) 1029
Hpy188I TCNGA 5 cut(s) 449, 721, 855, 861, 1023
Hpy188III TCNNGA 4 cut(s) 64, 230, 311, 797
Hpy8I GTNNAC 1 cut(s) 1029
HpyAV CCTTC 1 cut(s) 431
HpyCH4IV ACGT 1 cut(s) 266
HpyCH4V TGCA 7 cut(s) 186, 193, 290, 403, 503, 925, 954
HpyF3I CTNAG 1 cut(s) 376
HpySE526I ACGT 1 cut(s) 266
Hsp92II CATG 3 cut(s) 407, 590, 643
KpnI GGTACC 1 cut(s) 685
Ksp22I TGATCA 1 cut(s) 990
Kzo9I GATC 8 cut(s) 53, 91, 204, 235, 296, 556, 871, 990
LmnI GCTCC 2 cut(s) 270, 449
Lsp1109I GCAGC 2 cut(s) 359, 508
LweI GCATC 4 cut(s) 166, 277, 359, 971
MaeI CTAG 8 cut(s) 86, 230, 302, 453, 477, 482, 537, 1045
MaeII ACGT 1 cut(s) 266
MaeIII GTNAC 3 cut(s) 311, 412, 787
MalI GATC 8 cut(s) 55, 93, 206, 237, 298, 558, 873, 992
MboI GATC 8 cut(s) 53, 91, 204, 235, 296, 556, 871, 990
MboII GAAGA 2 cut(s) 668, 684
MflI RGATCY 5 cut(s) 53, 91, 204, 296, 556
MhlI GDGCHC 2 cut(s) 153, 621
MluCI AATT 5 cut(s) 133, 562, 816, 820, 833
MnlI CCTC 7 cut(s) 28, 67, 82, 277, 434, 645, 883
MroXI GAANNNNTTC 2 cut(s) 260, 1017
MseI TTAA 5 cut(s) 252, 356, 464, 702, 819
MslI CAYNNNNRTG 4 cut(s) 348, 408, 591, 949
MspI CCGG 1 cut(s) 553
MspR9I CCNGG 3 cut(s) 469, 554, 1038
MvaI CCWGG 2 cut(s) 469, 1038
NciI CCSGG 1 cut(s) 554
NdeI CATATG 2 cut(s) 649, 826
NdeII GATC 8 cut(s) 53, 91, 204, 235, 296, 556, 871, 990
NlaIII CATG 3 cut(s) 407, 590, 643
NlaIV GGNNCC 2 cut(s) 55, 683
NmuCI GTSAC 1 cut(s) 311
PcsI WCGNNNNNNNCGW 2 cut(s) 17, 807
PdmI GAANNNNTTC 2 cut(s) 260, 1017
PfeI GAWTC 4 cut(s) 458, 812, 856, 1018
PfoI TCCNGGA 1 cut(s) 552
PkrI GCNGC 2 cut(s) 374, 498
Ple19I CGATCG 1 cut(s) 238
PmaCI CACGTG 1 cut(s) 267
PmlI CACGTG 1 cut(s) 267
Ppu21I YACGTR 1 cut(s) 267
PshBI ATTAAT 1 cut(s) 819
Psp124BI GAGCTC 1 cut(s) 153
Psp6I CCWGG 2 cut(s) 467, 1036
PspCI CACGTG 1 cut(s) 267
PspEI GGTNACC 1 cut(s) 787
PspGI CCWGG 2 cut(s) 467, 1036
PspN4I GGNNCC 2 cut(s) 55, 683
PspPI GGNCC 2 cut(s) 540, 583
PsuI RGATCY 5 cut(s) 53, 91, 204, 296, 556
PvuI CGATCG 1 cut(s) 238
RsaI GTAC 4 cut(s) 84, 260, 683, 912
RsaNI GTAC 4 cut(s) 83, 259, 682, 911
RseI CAYNNNNRTG 4 cut(s) 348, 408, 591, 949
SacI GAGCTC 1 cut(s) 153
SaqAI TTAA 5 cut(s) 252, 356, 464, 702, 819
SatI GCNGC 2 cut(s) 373, 497
Sau3AI GATC 8 cut(s) 53, 91, 204, 235, 296, 556, 871, 990
Sau96I GGNCC 2 cut(s) 540, 583
ScaI AGTACT 2 cut(s) 84, 260
ScrFI CCNGG 3 cut(s) 469, 554, 1038
SduI GDGCHC 2 cut(s) 153, 621
SfaNI GCATC 4 cut(s) 166, 277, 359, 971
SmiMI CAYNNNNRTG 4 cut(s) 348, 408, 591, 949
SmlI CTYRAG 1 cut(s) 957
SmoI CTYRAG 1 cut(s) 957
Sse9I AATT 5 cut(s) 133, 562, 816, 820, 833
SsiI CCGC 1 cut(s) 528
SspMI CTAG 8 cut(s) 86, 230, 302, 453, 477, 482, 537, 1045
SstI GAGCTC 1 cut(s) 153
StyD4I CCNGG 3 cut(s) 467, 552, 1036
StyI CCWWGG 1 cut(s) 536
TaiI ACGT 1 cut(s) 269
TaqI TCGA 1 cut(s) 238
TasI AATT 5 cut(s) 133, 562, 816, 820, 833
TatI WGTACW 3 cut(s) 82, 258, 910
TfiI GAWTC 4 cut(s) 458, 812, 856, 1018
Tru1I TTAA 5 cut(s) 252, 356, 464, 702, 819
Tru9I TTAA 5 cut(s) 252, 356, 464, 702, 819
TscAI CASTG 2 cut(s) 226, 945
TseFI GTSAC 1 cut(s) 311
TseI GCWGC 2 cut(s) 372, 496
Tsp45I GTSAC 1 cut(s) 311
TspDTI ATGAA 8 cut(s) 420, 450, 656, 675, 813, 827, 984, 990
TspRI CASTG 2 cut(s) 226, 945
VspI ATTAAT 1 cut(s) 819
XagI CCTNNNNNAGG 1 cut(s) 535
XapI RAATTY 2 cut(s) 562, 833
XbaI TCTAGA 1 cut(s) 229
XmaJI CCTAGG 1 cut(s) 536
XmiI GTMKAC 1 cut(s) 1028
XmnI GAANNNNTTC 2 cut(s) 260, 1017
XspI CTAG 8 cut(s) 86, 230, 302, 453, 477, 482, 537, 1045
ZrmI AGTACT 2 cut(s) 84, 260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.