pycom10g09500
NAC Family

Inactive serine threonine-protein kinase At1g67470-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
12590218 .. 12590769
552 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g09500.1

Sequence Viewer

Length: 552 bp
ATGCTAATTGCAAAGAAAGTTGCAAATGCACTTGCATATCTCCATACTGCCTTTCCCAGGCCAATCATTCATCGCGATTTAAATTCCAGCTGTATTTTCTTGGGCCATGATTATGTTCCCAAACTCACCAACTTCTCACTCTCCATTTCCATTCCTCCTATGCAGTCTCATGTTGAAGATCTTCCGAAAGGGACATTTGGGTACCTTGATCCTTCTTACATGAAGTCTGGTTACATTACAGAAAAAAGTGATGTTTATAGCTTTGGTGTGCATTTACTTGTATTCTTAACGGGACAAAAAGCCCTAGTTAAATATGACACAATAGAATACCAATCGATTATTGCATATGTGAAACAACATGTTAGTGAAATCGGGCAGATTCAGACAATTGTGGACCCTAAAATCAAAGAGGATGTAGGGAGAGATGAGAAAGTGCAGCGGCAGTTGCAAGATTTCCTACAACTGGCATTGTCATGCACTCAAGAAGAAAGTGAAAGAAGGCCATATATGACAGACGTGGCTAGAGAACTCGTTCGAATTGACAAGATATGA

Protein Analysis

184

Amino Acids

20.91

Weight (kDa)

6.59

Isoelectric Point (pI)

45.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 3 - 173 1.6e-16 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 3 - 177 8e-15 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 201
AccB1I GGYRCC 1 cut(s) 201
AccII CGCG 1 cut(s) 75
AciI CCGC 1 cut(s) 439
AclWI GGATC 1 cut(s) 203
AcsI RAATTY 1 cut(s) 82
AfaI GTAC 1 cut(s) 203
AfiI CCNNNNNNNGG 2 cut(s) 57, 463
AflIII ACRYGT 1 cut(s) 358
AgsI TTSAA 1 cut(s) 176
AjiI CACGTC 1 cut(s) 517
AjnI CCWGG 1 cut(s) 56
AluBI AGCT 2 cut(s) 90, 261
AluI AGCT 2 cut(s) 90, 261
Alw26I GTCTC 1 cut(s) 171
AlwI GGATC 1 cut(s) 203
AoxI GGCC 3 cut(s) 59, 103, 500
ApeKI GCWGC 1 cut(s) 436
ApoI RAATTY 1 cut(s) 82
Asp700I GAANNNNTTC 2 cut(s) 180, 531
Asp718I GGTACC 1 cut(s) 201
AspS9I GGNCC 2 cut(s) 103, 394
AsuHPI GGTGA 1 cut(s) 118
AsuII TTCGAA 1 cut(s) 535
AvaII GGWCC 1 cut(s) 394
BanI GGYRCC 1 cut(s) 201
BarI GAAGNNNNNNTAC 2 cut(s) 215, 247
BbvI GCAGC 1 cut(s) 448
BciT130I CCWGG 1 cut(s) 58
BcoDI GTCTC 1 cut(s) 171
BfaI CTAG 2 cut(s) 305, 522
BglII AGATCT 1 cut(s) 178
BisI GCNGC 2 cut(s) 437, 440
BlsI GCNGC 2 cut(s) 438, 441
Bme1390I CCNGG 1 cut(s) 58
Bme18I GGWCC 1 cut(s) 394
BmgBI CACGTC 1 cut(s) 517
BmgT120I GGNCC 2 cut(s) 103, 394
BmiI GGNNCC 2 cut(s) 203, 396
BmrFI CCNGG 1 cut(s) 58
Bpu14I TTCGAA 1 cut(s) 535
BpuEI CTTGAG 1 cut(s) 465
Bsa29I ATCGAT 1 cut(s) 335
BsaJI CCNNGG 1 cut(s) 56
Bsc4I CCNNNNNNNGG 2 cut(s) 57, 463
Bse1I ACTGG 1 cut(s) 468
BseBI CCWGG 1 cut(s) 58
BseCI ATCGAT 1 cut(s) 335
BseDI CCNNGG 1 cut(s) 56
BseGI GGATG 1 cut(s) 418
BseLI CCNNNNNNNGG 2 cut(s) 57, 463
BseNI ACTGG 1 cut(s) 468
BseXI GCAGC 1 cut(s) 448
BsgI GTGCAG 1 cut(s) 455
Bsh1236I CGCG 1 cut(s) 75
BshFI GGCC 3 cut(s) 61, 105, 502
BshNI GGYRCC 1 cut(s) 201
BshVI ATCGAT 1 cut(s) 335
BslFI GGGAC 2 cut(s) 205, 306
BslI CCNNNNNNNGG 2 cut(s) 57, 463
BsmAI GTCTC 1 cut(s) 171
BsmFI GGGAC 2 cut(s) 205, 306
BsnI GGCC 3 cut(s) 61, 105, 502
Bsp119I TTCGAA 1 cut(s) 535
Bsp143I GATC 2 cut(s) 178, 208
Bsp68I TCGCGA 1 cut(s) 75
BspACI CCGC 1 cut(s) 439
BspANI GGCC 3 cut(s) 61, 105, 502
BspDI ATCGAT 1 cut(s) 335
BspFNI CGCG 1 cut(s) 75
BspLI GGNNCC 2 cut(s) 203, 396
BspPI GGATC 1 cut(s) 203
BspT104I TTCGAA 1 cut(s) 535
BspT107I GGYRCC 1 cut(s) 201
BsrI ACTGG 1 cut(s) 468
BssECI CCNNGG 1 cut(s) 56
BssMI GATC 2 cut(s) 178, 208
Bst2UI CCWGG 1 cut(s) 58
BstBI TTCGAA 1 cut(s) 535
BstENI CCTNNNNNAGG 1 cut(s) 55
BstF5I GGATG 1 cut(s) 418
BstFNI CGCG 1 cut(s) 75
BstKTI GATC 2 cut(s) 181, 211
BstMAI GTCTC 1 cut(s) 171
BstMBI GATC 2 cut(s) 178, 208
BstMWI GCNNNNNNNGC 1 cut(s) 445
BstNI CCWGG 1 cut(s) 58
BstNSI RCATGY 1 cut(s) 362
BstSCI CCNGG 1 cut(s) 56
BstUI CGCG 1 cut(s) 75
BstV1I GCAGC 1 cut(s) 448
BstX2I RGATCY 1 cut(s) 178
BstYI RGATCY 1 cut(s) 178
Bsu15I ATCGAT 1 cut(s) 335
BsuRI GGCC 3 cut(s) 61, 105, 502
BsuTUI ATCGAT 1 cut(s) 335
BtgZI GCGATG 1 cut(s) 56
BtrI CACGTC 1 cut(s) 517
BtsCI GGATG 1 cut(s) 418
BtuMI TCGCGA 1 cut(s) 75
Cfr13I GGNCC 2 cut(s) 103, 394
ClaI ATCGAT 1 cut(s) 335
Csp6I GTAC 1 cut(s) 202
CviAII CATG 5 cut(s) 107, 170, 220, 359, 474
CviJI RGCY 7 cut(s) 61, 90, 105, 261, 302, 502, 521
CviKI_1 RGCY 7 cut(s) 61, 90, 105, 261, 302, 502, 521
CviQI GTAC 1 cut(s) 202
DpnI GATC 2 cut(s) 180, 210
DpnII GATC 2 cut(s) 178, 208
DraI TTTAAA 1 cut(s) 81
Eco47I GGWCC 1 cut(s) 394
EcoNI CCTNNNNNAGG 1 cut(s) 55
EcoRII CCWGG 1 cut(s) 56
FaeI CATG 5 cut(s) 110, 173, 223, 362, 477
FaqI GGGAC 2 cut(s) 205, 306
FatI CATG 5 cut(s) 106, 169, 219, 358, 473
FauNDI CATATG 1 cut(s) 346
Fnu4HI GCNGC 2 cut(s) 437, 440
FokI GGATG 1 cut(s) 425
Fsp4HI GCNGC 2 cut(s) 437, 440
FspBI CTAG 2 cut(s) 305, 522
GluI GCNGC 2 cut(s) 437, 440
HaeIII GGCC 3 cut(s) 61, 105, 502
Hin1II CATG 5 cut(s) 110, 173, 223, 362, 477
HinfI GANTC 1 cut(s) 379
HphI GGTGA 1 cut(s) 118
Hpy166II GTNNAC 1 cut(s) 394
Hpy188I TCNGA 2 cut(s) 186, 384
Hpy188III TCNNGA 2 cut(s) 74, 482
Hpy8I GTNNAC 1 cut(s) 394
HpyAV CCTTC 2 cut(s) 222, 492
HpyCH4IV ACGT 1 cut(s) 516
HpyF10VI GCNNNNNNNGC 1 cut(s) 445
HpySE526I ACGT 1 cut(s) 516
Hsp92II CATG 5 cut(s) 110, 173, 223, 362, 477
KpnI GGTACC 1 cut(s) 205
Kzo9I GATC 2 cut(s) 178, 208
LpnPI CCDG 5 cut(s) 43, 70, 100, 213, 449
Lsp1109I GCAGC 1 cut(s) 448
MaeI CTAG 2 cut(s) 305, 522
MaeII ACGT 1 cut(s) 516
MaeIII GTNAC 1 cut(s) 230
MalI GATC 2 cut(s) 180, 210
MboI GATC 2 cut(s) 178, 208
MboII GAAGA 3 cut(s) 173, 188, 497
MfeI CAATTG 1 cut(s) 387
MflI RGATCY 1 cut(s) 178
MluCI AATT 4 cut(s) 6, 82, 387, 537
MnlI CCTC 2 cut(s) 165, 403
MroXI GAANNNNTTC 2 cut(s) 180, 531
MseI TTAA 3 cut(s) 80, 287, 309
MslI CAYNNNNRTG 3 cut(s) 111, 363, 472
MspA1I CMGCKG 2 cut(s) 90, 439
MspR9I CCNGG 1 cut(s) 58
MunI CAATTG 1 cut(s) 387
MvaI CCWGG 1 cut(s) 58
MvnI CGCG 1 cut(s) 75
MwoI GCNNNNNNNGC 1 cut(s) 445
NdeI CATATG 1 cut(s) 346
NdeII GATC 2 cut(s) 178, 208
NlaIII CATG 5 cut(s) 110, 173, 223, 362, 477
NlaIV GGNNCC 2 cut(s) 203, 396
NruI TCGCGA 1 cut(s) 75
NspI RCATGY 1 cut(s) 362
NspV TTCGAA 1 cut(s) 535
PciI ACATGT 1 cut(s) 358
PdmI GAANNNNTTC 2 cut(s) 180, 531
PfeI GAWTC 1 cut(s) 379
PkrI GCNGC 2 cut(s) 438, 441
PscI ACATGT 1 cut(s) 358
Psp6I CCWGG 1 cut(s) 56
PspGI CCWGG 1 cut(s) 56
PspN4I GGNNCC 2 cut(s) 203, 396
PspPI GGNCC 2 cut(s) 103, 394
PsuI RGATCY 1 cut(s) 178
PvuII CAGCTG 1 cut(s) 90
RruI TCGCGA 1 cut(s) 75
RsaI GTAC 1 cut(s) 203
RsaNI GTAC 1 cut(s) 202
RseI CAYNNNNRTG 3 cut(s) 111, 363, 472
SaqAI TTAA 3 cut(s) 80, 287, 309
SatI GCNGC 2 cut(s) 437, 440
Sau3AI GATC 2 cut(s) 178, 208
Sau96I GGNCC 2 cut(s) 103, 394
ScrFI CCNGG 1 cut(s) 58
SetI ASST 4 cut(s) 92, 207, 263, 519
SfuI TTCGAA 1 cut(s) 535
SinI GGWCC 1 cut(s) 394
SmiI ATTTAAAT 1 cut(s) 81
SmiMI CAYNNNNRTG 3 cut(s) 111, 363, 472
SmlI CTYRAG 1 cut(s) 480
SmoI CTYRAG 1 cut(s) 480
Sse9I AATT 4 cut(s) 6, 82, 387, 537
SsiI CCGC 1 cut(s) 439
SspMI CTAG 2 cut(s) 305, 522
StyD4I CCNGG 1 cut(s) 56
SwaI ATTTAAAT 1 cut(s) 81
TaiI ACGT 1 cut(s) 519
TaqI TCGA 2 cut(s) 335, 535
TasI AATT 4 cut(s) 6, 82, 387, 537
TauI GCSGC 1 cut(s) 442
TfiI GAWTC 1 cut(s) 379
Tru1I TTAA 3 cut(s) 80, 287, 309
Tru9I TTAA 3 cut(s) 80, 287, 309
TseI GCWGC 1 cut(s) 436
TspDTI ATGAA 2 cut(s) 59, 236
VpaK11BI GGWCC 1 cut(s) 394
XagI CCTNNNNNAGG 1 cut(s) 55
XapI RAATTY 1 cut(s) 82
XceI RCATGY 1 cut(s) 362
XmnI GAANNNNTTC 2 cut(s) 180, 531
XspI CTAG 2 cut(s) 305, 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.