Rroxscaffold_7G00212700

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
63178535 .. 63179614
1080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00212700.1

Sequence Viewer

Length: 1080 bp
ATGCATGTGTTTATGTTTTACCTTTGTTGCATCACCAGGTTTTCGTTGCTTGCGTGTTTGAGAAAGGAGGAACGAGATACTGAGAGATCCTCATTCTTGATCAATGGAAGCAAAGTACTAGAGGATCTCATTGTTTCTTTTGATGGCAAATCTAATCCTATTCGCAATTACTCTGCTGATGAGCTCATTAAGGCAACCAACAACTTTGATGCTTCTTGCATTATGCAAGAATGTAGGATCTACAAAATGTTCAGTGGTGTTCTAGACGATCGATCTATTATCATTAAGAAGTACTTGACGTTGAGCTGGCTCAATGAGGATGCAGTAAGATCTCTAGCTATTCGTGACATTATCATTTCAACACAGATGAGCAACCATAATAATGTTTTAAAACTTTTGGGATGCTGCTTAGAGTTTCCTATACCAGCTCTAGTGCATGAATATGCAACAATAGGAGTGCTAAATGATGAAGGAGGTTTCGGAGCTAGTGAATCCTTAACCTGGAAAGCTAGACTAGGTATAGCGAAGCAGCTTGCAAATGCTCTTACATATCTCCATACTGCCTTTCCTAGGCCCATCATTCTCCGGGATCTAAATTTTAGTTGTATTTACTTGGGCCATGATTATGTTCCCAAACTCTCCTACTTCGGGCTCTCCATAACCATCCCTCCCATGAAATCATATGCTGAAGATGAACCAAAAGGAAGATTTGGGTACCTTGACCCTGCTTACATTACATCTGGTATTATTTCAGAGAAAGGTGATGTTTATAGCTTTGGTGTGCTTTTACTTATATTTCTAACAGGACAGAAAGCTGTGGTTACCAATCAGGACGGGGAATATGAATCAATTAATTCATATGTGAAATTTCATACTTGTAATGGTCAGATTCAGAGCATTGTTGATCCCAAAATCTTTGGCGAGGTAGGGAAAGATGAGCAAGTACAACAGCACTTGCAAGATTTCGTAGCACTGGCATTATTATGCACTCAAGCATCAAATGAAAATGAACGGCCAGATATGATCAATGTATCAAAAGAGCTGGAAAGGATTCAGAAGTCTACCTTTCCTCGTTGCTAG

Protein Analysis

359

Amino Acids

40.51

Weight (kDa)

5.72

Isoelectric Point (pI)

34.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 109 - 323 1.9e-15 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 114 - 281 2e-17 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 714
AccB1I GGYRCC 1 cut(s) 714
AccI GTMKAC 1 cut(s) 1061
AclWI GGATC 5 cut(s) 81, 132, 245, 597, 899
AcoI YGGCCR 1 cut(s) 1013
AcsI RAATTY 2 cut(s) 595, 866
AcuI CTGAAG 1 cut(s) 708
AfaI GTAC 4 cut(s) 117, 293, 716, 945
AfiI CCNNNNNNNGG 3 cut(s) 501, 570, 648
AgsI TTSAA 1 cut(s) 360
AjnI CCWGG 2 cut(s) 35, 500
Alw21I GWGCWC 1 cut(s) 186
AlwI GGATC 5 cut(s) 81, 132, 245, 597, 899
AoxI GGCC 3 cut(s) 572, 616, 1013
ApeKI GCWGC 2 cut(s) 405, 529
ApoI RAATTY 2 cut(s) 595, 866
AseI ATTAAT 1 cut(s) 852
Asp700I GAANNNNTTC 1 cut(s) 1050
Asp718I GGTACC 1 cut(s) 714
AspA2I CCTAGG 1 cut(s) 569
AspS9I GGNCC 2 cut(s) 573, 616
AsuC2I CCSGG 1 cut(s) 587
AsuHPI GGTGA 2 cut(s) 25, 773
AvrII CCTAGG 1 cut(s) 569
BanI GGYRCC 1 cut(s) 714
BanII GRGCYC 2 cut(s) 186, 654
Bbv12I GWGCWC 1 cut(s) 186
BbvI GCAGC 2 cut(s) 392, 541
BccI CCATC 3 cut(s) 137, 584, 671
BceAI ACGGC 1 cut(s) 1028
BciT130I CCWGG 2 cut(s) 37, 502
BclI TGATCA 2 cut(s) 99, 1023
BcnI CCSGG 1 cut(s) 587
BfaI CTAG 9 cut(s) 119, 263, 335, 431, 486, 510, 515, 570, 1078
BglII AGATCT 1 cut(s) 329
BisI GCNGC 2 cut(s) 406, 530
BlnI CCTAGG 1 cut(s) 569
BlsI GCNGC 2 cut(s) 407, 531
BmcAI AGTACT 2 cut(s) 117, 293
Bme1390I CCNGG 3 cut(s) 37, 502, 587
BmgT120I GGNCC 2 cut(s) 573, 616
BmiI GGNNCC 1 cut(s) 716
BmrFI CCNGG 3 cut(s) 37, 502, 587
BmsI GCATC 5 cut(s) 39, 199, 310, 392, 1004
BplI GAGNNNNNCTC 2 cut(s) 74, 106
BpuEI CTTGAG 1 cut(s) 975
BpuMI CCSGG 1 cut(s) 587
Bsa29I ATCGAT 1 cut(s) 271
BsaJI CCNNGG 1 cut(s) 569
BsaXI ACNNNNNCTCC 2 cut(s) 652, 682
Bsc4I CCNNNNNNNGG 3 cut(s) 501, 570, 648
Bse1I ACTGG 1 cut(s) 978
BseBI CCWGG 2 cut(s) 37, 502
BseCI ATCGAT 1 cut(s) 271
BseDI CCNNGG 1 cut(s) 569
BseGI GGATG 3 cut(s) 325, 407, 663
BseLI CCNNNNNNNGG 3 cut(s) 501, 570, 648
BseMII CTCAG 1 cut(s) 72
BseNI ACTGG 1 cut(s) 978
BseXI GCAGC 2 cut(s) 392, 541
Bsh1285I CGRYCG 1 cut(s) 271
BshFI GGCC 3 cut(s) 574, 618, 1015
BshNI GGYRCC 1 cut(s) 714
BshVI ATCGAT 1 cut(s) 271
BsiEI CGRYCG 1 cut(s) 271
BsiHKAI GWGCWC 1 cut(s) 186
BsiSI CCGG 1 cut(s) 586
BslI CCNNNNNNNGG 3 cut(s) 501, 570, 648
BsnI GGCC 3 cut(s) 574, 618, 1015
Bsp1286I GDGCHC 2 cut(s) 186, 654
BspANI GGCC 3 cut(s) 574, 618, 1015
BspCNI CTCAG 1 cut(s) 73
BspDI ATCGAT 1 cut(s) 271
BspLI GGNNCC 1 cut(s) 716
BspPI GGATC 5 cut(s) 81, 132, 245, 597, 899
BspT107I GGYRCC 1 cut(s) 714
BsrI ACTGG 1 cut(s) 978
BssECI CCNNGG 1 cut(s) 569
BssT1I CCWWGG 1 cut(s) 569
Bst2UI CCWGG 2 cut(s) 37, 502
BstC8I GCNNGC 3 cut(s) 51, 308, 534
BstDEI CTNAG 2 cut(s) 81, 409
BstEII GGTNACC 1 cut(s) 820
BstENI CCTNNNNNAGG 1 cut(s) 568
BstF5I GGATG 3 cut(s) 325, 407, 663
BstMCI CGRYCG 1 cut(s) 271
BstNI CCWGG 2 cut(s) 37, 502
BstNSI RCATGY 1 cut(s) 8
BstPI GGTNACC 1 cut(s) 820
BstSCI CCNGG 3 cut(s) 35, 500, 585
BstV1I GCAGC 2 cut(s) 392, 541
BstX2I RGATCY 5 cut(s) 86, 124, 237, 329, 589
BstYI RGATCY 5 cut(s) 86, 124, 237, 329, 589
Bsu15I ATCGAT 1 cut(s) 271
BsuRI GGCC 3 cut(s) 574, 618, 1015
BsuTUI ATCGAT 1 cut(s) 271
BtsCI GGATG 3 cut(s) 325, 407, 663
BtsIMutI CAGTG 2 cut(s) 259, 971
Cac8I GCNNGC 3 cut(s) 51, 308, 534
Cfr13I GGNCC 2 cut(s) 573, 616
ClaI ATCGAT 1 cut(s) 271
CsiI ACCWGGT 1 cut(s) 35
Csp6I GTAC 4 cut(s) 116, 292, 715, 944
CviAII CATG 4 cut(s) 5, 437, 620, 673
CviQI GTAC 4 cut(s) 116, 292, 715, 944
DdeI CTNAG 2 cut(s) 81, 409
DraI TTTAAA 1 cut(s) 390
EaeI YGGCCR 1 cut(s) 1013
Ecl136II GAGCTC 1 cut(s) 184
Eco130I CCWWGG 1 cut(s) 569
Eco24I GRGCYC 2 cut(s) 186, 654
Eco53kI GAGCTC 1 cut(s) 184
Eco57I CTGAAG 1 cut(s) 708
Eco91I GGTNACC 1 cut(s) 820
EcoICRI GAGCTC 1 cut(s) 184
EcoNI CCTNNNNNAGG 1 cut(s) 568
EcoO65I GGTNACC 1 cut(s) 820
EcoRII CCWGG 2 cut(s) 35, 500
EcoT14I CCWWGG 1 cut(s) 569
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 186, 654
ErhI CCWWGG 1 cut(s) 569
FaeI CATG 4 cut(s) 8, 440, 623, 676
FalI AAGNNNNNCTT 3 cut(s) 278, 310, 1049
FatI CATG 4 cut(s) 4, 436, 619, 672
FauNDI CATATG 2 cut(s) 682, 859
FbaI TGATCA 2 cut(s) 99, 1023
FblI GTMKAC 1 cut(s) 1061
Fnu4HI GCNGC 2 cut(s) 406, 530
FokI GGATG 3 cut(s) 332, 414, 650
FriOI GRGCYC 2 cut(s) 186, 654
Fsp4HI GCNGC 2 cut(s) 406, 530
FspBI CTAG 9 cut(s) 119, 263, 335, 431, 486, 510, 515, 570, 1078
GluI GCNGC 2 cut(s) 406, 530
HaeIII GGCC 3 cut(s) 574, 618, 1015
HapII CCGG 1 cut(s) 586
Hin1II CATG 4 cut(s) 8, 440, 623, 676
HinfI GANTC 4 cut(s) 491, 845, 889, 1051
HpaII CCGG 1 cut(s) 586
HphI GGTGA 2 cut(s) 25, 773
Hpy166II GTNNAC 1 cut(s) 1062
Hpy188I TCNGA 5 cut(s) 482, 754, 888, 894, 1056
Hpy188III TCNNGA 4 cut(s) 97, 263, 344, 830
Hpy8I GTNNAC 1 cut(s) 1062
HpyAV CCTTC 1 cut(s) 464
HpyCH4IV ACGT 1 cut(s) 299
HpyF3I CTNAG 2 cut(s) 81, 409
HpySE526I ACGT 1 cut(s) 299
Hsp92II CATG 4 cut(s) 8, 440, 623, 676
KpnI GGTACC 1 cut(s) 718
Ksp22I TGATCA 2 cut(s) 99, 1023
LmnI GCTCC 1 cut(s) 482
Lsp1109I GCAGC 2 cut(s) 392, 541
LweI GCATC 5 cut(s) 39, 199, 310, 392, 1004
MabI ACCWGGT 1 cut(s) 35
MaeI CTAG 9 cut(s) 119, 263, 335, 431, 486, 510, 515, 570, 1078
MaeII ACGT 1 cut(s) 299
MaeIII GTNAC 2 cut(s) 344, 820
MboII GAAGA 2 cut(s) 701, 717
MflI RGATCY 5 cut(s) 86, 124, 237, 329, 589
MhlI GDGCHC 2 cut(s) 186, 654
MluCI AATT 5 cut(s) 166, 595, 849, 853, 866
MnlI CCTC 8 cut(s) 61, 100, 115, 310, 467, 678, 916, 1080
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 1050
MseI TTAA 5 cut(s) 189, 285, 389, 497, 852
MslI CAYNNNNRTG 4 cut(s) 381, 441, 624, 982
MspI CCGG 1 cut(s) 586
MspR9I CCNGG 3 cut(s) 37, 502, 587
MvaI CCWGG 2 cut(s) 37, 502
NciI CCSGG 1 cut(s) 587
NdeI CATATG 2 cut(s) 682, 859
NlaIII CATG 4 cut(s) 8, 440, 623, 676
NlaIV GGNNCC 1 cut(s) 716
NmuCI GTSAC 1 cut(s) 344
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 8
PcsI WCGNNNNNNNCGW 1 cut(s) 50
PdmI GAANNNNTTC 1 cut(s) 1050
PfeI GAWTC 4 cut(s) 491, 845, 889, 1051
PfoI TCCNGGA 1 cut(s) 585
PkrI GCNGC 2 cut(s) 407, 531
Ple19I CGATCG 1 cut(s) 271
PshBI ATTAAT 1 cut(s) 852
Psp124BI GAGCTC 1 cut(s) 186
Psp6I CCWGG 2 cut(s) 35, 500
PspEI GGTNACC 1 cut(s) 820
PspGI CCWGG 2 cut(s) 35, 500
PspN4I GGNNCC 1 cut(s) 716
PspPI GGNCC 2 cut(s) 573, 616
PsuI RGATCY 5 cut(s) 86, 124, 237, 329, 589
PvuI CGATCG 1 cut(s) 271
RsaI GTAC 4 cut(s) 117, 293, 716, 945
RsaNI GTAC 4 cut(s) 116, 292, 715, 944
RseI CAYNNNNRTG 4 cut(s) 381, 441, 624, 982
SacI GAGCTC 1 cut(s) 186
SaqAI TTAA 5 cut(s) 189, 285, 389, 497, 852
SatI GCNGC 2 cut(s) 406, 530
Sau96I GGNCC 2 cut(s) 573, 616
ScaI AGTACT 2 cut(s) 117, 293
ScrFI CCNGG 3 cut(s) 37, 502, 587
SduI GDGCHC 2 cut(s) 186, 654
SexAI ACCWGGT 1 cut(s) 35
SfaNI GCATC 5 cut(s) 39, 199, 310, 392, 1004
SmiMI CAYNNNNRTG 4 cut(s) 381, 441, 624, 982
SmlI CTYRAG 1 cut(s) 990
SmoI CTYRAG 1 cut(s) 990
Sse9I AATT 5 cut(s) 166, 595, 849, 853, 866
SspMI CTAG 9 cut(s) 119, 263, 335, 431, 486, 510, 515, 570, 1078
SstI GAGCTC 1 cut(s) 186
StyD4I CCNGG 3 cut(s) 35, 500, 585
StyI CCWWGG 1 cut(s) 569
TaiI ACGT 1 cut(s) 302
TaqI TCGA 1 cut(s) 271
TasI AATT 5 cut(s) 166, 595, 849, 853, 866
TatI WGTACW 3 cut(s) 115, 291, 943
TfiI GAWTC 4 cut(s) 491, 845, 889, 1051
Tru1I TTAA 5 cut(s) 189, 285, 389, 497, 852
Tru9I TTAA 5 cut(s) 189, 285, 389, 497, 852
TscAI CASTG 2 cut(s) 259, 978
TseFI GTSAC 1 cut(s) 344
TseI GCWGC 2 cut(s) 405, 529
Tsp45I GTSAC 1 cut(s) 344
TspDTI ATGAA 9 cut(s) 453, 483, 689, 708, 846, 858, 860, 1017, 1023
TspRI CASTG 2 cut(s) 259, 978
VspI ATTAAT 1 cut(s) 852
XagI CCTNNNNNAGG 1 cut(s) 568
XapI RAATTY 2 cut(s) 595, 866
XbaI TCTAGA 1 cut(s) 262
XceI RCATGY 1 cut(s) 8
XmaJI CCTAGG 1 cut(s) 569
XmiI GTMKAC 1 cut(s) 1061
XmnI GAANNNNTTC 1 cut(s) 1050
XspI CTAG 9 cut(s) 119, 263, 335, 431, 486, 510, 515, 570, 1078
ZrmI AGTACT 2 cut(s) 117, 293
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.