RLG00000015141

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
62236850 .. 62237845
996 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015141

Sequence Viewer

Length: 417 bp
ATGAAACTGACCAAGCACTCGTTGCTTCCATATTTGAAAAAGGAAGAGGAAGATGTTAATGGACATTTCTTGCATAATGGAAGCATCTTATTAGAGGATCTGATTGCCTCTTGTGATGGAACATCTAATCCCATTCGCAATTATTCTGCTGATGAACTCATCAGGGCAACCAACAACTTCCATCGTTCTTGCCATATAGATGATGGGTTATTTAAGGGTTTTCTAGACAACCGATTGATAATCATTAAGATGATGGGAAAGAAAACTTTTTATAGCAAGCCGCATGATGAGGCTATTCGTGACATTATCATATCAATACAGATGAGCGCTTACAAGAATGTTTTGAAACTGTTGGGCTGCTGCTTAGACTGTCCTGTACCAGCCTTTGTGATATTCATCAAACGTTCTCAACTCTAA

Protein Analysis

139

Amino Acids

15.74

Weight (kDa)

8.27

Isoelectric Point (pI)

47.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 281
AclI AACGTT 1 cut(s) 403
AclWI GGATC 1 cut(s) 105
AfaI GTAC 1 cut(s) 378
AfeI AGCGCT 1 cut(s) 328
AgsI TTSAA 2 cut(s) 37, 346
AloI GAACNNNNNNTCC 2 cut(s) 112, 144
AlwI GGATC 1 cut(s) 105
Aor51HI AGCGCT 1 cut(s) 328
ApeKI GCWGC 2 cut(s) 357, 360
AspLEI GCGC 1 cut(s) 329
BbvI GCAGC 2 cut(s) 344, 347
BccI CCATC 4 cut(s) 110, 189, 197, 247
BfaI CTAG 1 cut(s) 224
BfoI RGCGCY 1 cut(s) 330
BisI GCNGC 3 cut(s) 281, 358, 361
BlsI GCNGC 3 cut(s) 282, 359, 362
BmsI GCATC 1 cut(s) 93
BsaBI GATNNNNATC 1 cut(s) 395
Bse8I GATNNNNATC 1 cut(s) 395
BseJI GATNNNNATC 1 cut(s) 395
BseXI GCAGC 2 cut(s) 344, 347
Bsp143I GATC 1 cut(s) 97
BspACI CCGC 1 cut(s) 281
BspPI GGATC 1 cut(s) 105
BssMI GATC 1 cut(s) 97
Bst4CI ACNGT 2 cut(s) 351, 371
Bst6I CTCTTC 1 cut(s) 39
BstAPI GCANNNNNTGC 1 cut(s) 22
BstC8I GCNNGC 1 cut(s) 278
BstDEI CTNAG 1 cut(s) 364
BstH2I RGCGCY 1 cut(s) 330
BstHHI GCGC 1 cut(s) 329
BstKTI GATC 1 cut(s) 100
BstMBI GATC 1 cut(s) 97
BstMWI GCNNNNNNNGC 1 cut(s) 22
BstV1I GCAGC 2 cut(s) 344, 347
BstX2I RGATCY 1 cut(s) 97
BstYI RGATCY 1 cut(s) 97
Cac8I GCNNGC 1 cut(s) 278
CfoI GCGC 1 cut(s) 329
Csp6I GTAC 1 cut(s) 377
CviAII CATG 1 cut(s) 284
CviJI RGCY 4 cut(s) 280, 293, 357, 383
CviKI_1 RGCY 4 cut(s) 280, 293, 357, 383
CviQI GTAC 1 cut(s) 377
DdeI CTNAG 1 cut(s) 364
DpnI GATC 1 cut(s) 99
DpnII GATC 1 cut(s) 97
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
Eco47III AGCGCT 1 cut(s) 328
FaeI CATG 1 cut(s) 287
FaiI YATR 7 cut(s) 31, 75, 195, 197, 273, 285, 311
FatI CATG 1 cut(s) 283
Fnu4HI GCNGC 3 cut(s) 281, 358, 361
Fsp4HI GCNGC 3 cut(s) 281, 358, 361
FspBI CTAG 1 cut(s) 224
GlaI GCGC 1 cut(s) 328
GluI GCNGC 3 cut(s) 281, 358, 361
HaeII RGCGCY 1 cut(s) 330
HhaI GCGC 1 cut(s) 329
Hin1II CATG 1 cut(s) 287
Hin6I GCGC 1 cut(s) 327
HinP1I GCGC 1 cut(s) 327
Hpy188I TCNGA 1 cut(s) 102
Hpy188III TCNNGA 2 cut(s) 224, 299
HpyCH4III ACNGT 2 cut(s) 351, 371
HpyCH4IV ACGT 1 cut(s) 403
HpyCH4V TGCA 1 cut(s) 73
HpyF10VI GCNNNNNNNGC 1 cut(s) 22
HpyF3I CTNAG 1 cut(s) 364
HpySE526I ACGT 1 cut(s) 403
Hsp92II CATG 1 cut(s) 287
HspAI GCGC 1 cut(s) 327
Kzo9I GATC 1 cut(s) 97
LpnPI CCDG 3 cut(s) 148, 387, 393
Lsp1109I GCAGC 2 cut(s) 344, 347
LweI GCATC 1 cut(s) 93
MaeI CTAG 1 cut(s) 224
MaeII ACGT 1 cut(s) 403
MaeIII GTNAC 1 cut(s) 299
MalI GATC 1 cut(s) 99
MboI GATC 1 cut(s) 97
MboII GAAGA 2 cut(s) 56, 62
MflI RGATCY 1 cut(s) 97
MluCI AATT 1 cut(s) 139
MnlI CCTC 4 cut(s) 40, 88, 118, 283
MseI TTAA 3 cut(s) 57, 213, 246
MslI CAYNNNNRTG 2 cut(s) 198, 248
MwoI GCNNNNNNNGC 1 cut(s) 22
NdeII GATC 1 cut(s) 97
NlaIII CATG 1 cut(s) 287
NmuCI GTSAC 1 cut(s) 299
PkrI GCNGC 3 cut(s) 282, 359, 362
Psp1406I AACGTT 1 cut(s) 403
PsuI RGATCY 1 cut(s) 97
RsaI GTAC 1 cut(s) 378
RsaNI GTAC 1 cut(s) 377
RseI CAYNNNNRTG 2 cut(s) 198, 248
SaqAI TTAA 3 cut(s) 57, 213, 246
SatI GCNGC 3 cut(s) 281, 358, 361
Sau3AI GATC 1 cut(s) 97
SetI ASST 1 cut(s) 406
SfaNI GCATC 1 cut(s) 93
SmiMI CAYNNNNRTG 2 cut(s) 198, 248
Sse9I AATT 1 cut(s) 139
SsiI CCGC 1 cut(s) 281
SspMI CTAG 1 cut(s) 224
TaaI ACNGT 2 cut(s) 351, 371
TaiI ACGT 1 cut(s) 406
TasI AATT 1 cut(s) 139
TauI GCSGC 1 cut(s) 283
Tru1I TTAA 3 cut(s) 57, 213, 246
Tru9I TTAA 3 cut(s) 57, 213, 246
TseFI GTSAC 1 cut(s) 299
TseI GCWGC 2 cut(s) 357, 360
Tsp45I GTSAC 1 cut(s) 299
TspDTI ATGAA 3 cut(s) 17, 168, 385
XbaI TCTAGA 1 cut(s) 223
XcmI CCANNNNNNNNNTGG 1 cut(s) 200
XspI CTAG 1 cut(s) 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.