Rh7BG143800

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
10655986 .. 10657185
1200 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG143800.1

Sequence Viewer

Length: 1044 bp
ATGTCATCCAAAAGCTTGTTTTCACTGCTTCCATGTTTAAGGACAGCGGAGAGAGATACTGGTATTGTATCATCATCAATATTCTTGGAGAATGGAAGCAAATTATTAGAAGATCTCATTGCTTCATGTGATGGAAAGTCTAATCCAATTCGTTGTTATTCTCTTGATGAACTCACAAGGGCAACCAACAACTTTGATCCTTCTTGCATTATACAAGACTTTTCGGCGGAATTTCGTTACCAAATGTTTAGTGGTTTTCTAGATGACCGATCAATTACCATTAAGAAGTTTATGAGTACTGCCCAAGTTGGGTATGAAGCTAGGTCTCTGGCCATTCGTGACATTATAATAACAATGCAGATGAGCAGCCATAATAATGTCTTAAAGCTGTTGGGCTGCTGCTTAGAGCTCCCTATACCGGCTCTAGTGCTTGAATGTGCAAGTGAAGGAGTTCTAACTAGTGAAGCGGGTTGTGGAGCAAATCAATCCCTACCATGGAATATTAGGCTGCGCATTGCAAAGCAACTTGCAAATTCAATTACATATCTGCATACTGCCTTCTCCCGGCCAATTATTCATAGAGATATACGAGCCTCCTGTGTTTTCTTGGGCAATGATTATATTCCGAAGCTTTGCAACTTCTCACTGTCCATAACCATTCCTCCTATGCAATCCCATGTTGTAGATGAGCCAAAAGGGACATATGGGTACCTTGACCCTGCCTACATGAGGTCTGGTTACATTTCAGAAAAGACTGATGTTTATAGCTTTGGTGTGCTTTTACTTATATTGTTGACAGGCCAAAAAGTTGTGCTTCAATATCAAGGAGAATTTGAGTCGATTATTTCATATGTGAAACGTCATGCTAGTGATGGTCAGATTCAGACGGTAGTAGATCCTAAAATCCTTGGAGAGATAGGGGAAGATAAGCAAGCCCAAGAGCACTTGCATTTATTCCTAGCACTGGCATTGTCATGCACCCAAGATGAAAGTGAAGTAAGGCCAGATATGATTGATGTGGCTAAAGAACTGATACTTATTTAG

Protein Analysis

347

Amino Acids

38.6

Weight (kDa)

5.33

Isoelectric Point (pI)

40.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 91 - 282 1e-20 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 111 - 272 8.7e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 347
Acc16I TGCGCA 1 cut(s) 512
Acc65I GGTACC 1 cut(s) 708
AccB1I GGYRCC 1 cut(s) 708
AciI CCGC 3 cut(s) 47, 227, 467
AclWI GGATC 2 cut(s) 191, 890
AcoI YGGCCR 2 cut(s) 330, 566
AcsI RAATTY 3 cut(s) 230, 532, 830
AfaI GTAC 2 cut(s) 298, 710
AfiI CCNNNNNNNGG 6 cut(s) 309, 418, 495, 564, 729, 964
AgsI TTSAA 3 cut(s) 434, 537, 818
AhlI ACTAGT 1 cut(s) 458
AluBI AGCT 6 cut(s) 15, 320, 388, 409, 631, 768
AluI AGCT 6 cut(s) 15, 320, 388, 409, 631, 768
Alw21I GWGCWC 2 cut(s) 411, 945
Alw26I GTCTC 1 cut(s) 330
AlwI GGATC 2 cut(s) 191, 890
AoxI GGCC 4 cut(s) 330, 566, 799, 1001
ApeKI GCWGC 4 cut(s) 366, 396, 399, 508
ApoI RAATTY 3 cut(s) 230, 532, 830
Asp700I GAANNNNTTC 1 cut(s) 450
Asp718I GGTACC 1 cut(s) 708
AspLEI GCGC 1 cut(s) 513
AsuC2I CCSGG 1 cut(s) 565
BalI TGGCCA 1 cut(s) 332
BanI GGYRCC 1 cut(s) 708
BanII GRGCYC 1 cut(s) 411
Bbv12I GWGCWC 2 cut(s) 411, 945
BbvI GCAGC 4 cut(s) 378, 383, 386, 495
BccI CCATC 2 cut(s) 125, 866
BcnI CCSGG 1 cut(s) 565
BcoDI GTCTC 1 cut(s) 330
BcuI ACTAGT 1 cut(s) 458
BfaI CTAG 6 cut(s) 260, 321, 425, 459, 867, 959
BglII AGATCT 1 cut(s) 112
BisI GCNGC 4 cut(s) 367, 397, 400, 509
BlsI GCNGC 4 cut(s) 368, 398, 401, 510
BmcAI AGTACT 1 cut(s) 298
Bme1390I CCNGG 1 cut(s) 565
BmiI GGNNCC 1 cut(s) 710
BmrFI CCNGG 1 cut(s) 565
BpuMI CCSGG 1 cut(s) 565
BsaI GGTCTC 1 cut(s) 330
BsaJI CCNNGG 2 cut(s) 494, 907
BsaXI ACNNNNNCTCC 2 cut(s) 646, 676
Bsc4I CCNNNNNNNGG 6 cut(s) 309, 418, 495, 564, 729, 964
Bse118I RCCGGY 1 cut(s) 418
Bse1I ACTGG 2 cut(s) 64, 969
Bse3DI GCAATG 3 cut(s) 117, 513, 619
BseDI CCNNGG 2 cut(s) 494, 907
BseGI GGATG 1 cut(s) 5
BseLI CCNNNNNNNGG 6 cut(s) 309, 418, 495, 564, 729, 964
BseMI GCAATG 3 cut(s) 117, 513, 619
BseNI ACTGG 2 cut(s) 64, 969
BseXI GCAGC 4 cut(s) 378, 383, 386, 495
BshFI GGCC 4 cut(s) 332, 568, 801, 1003
BshNI GGYRCC 1 cut(s) 708
BsiHKAI GWGCWC 2 cut(s) 411, 945
BsiSI CCGG 2 cut(s) 419, 565
BslFI GGGAC 1 cut(s) 712
BslI CCNNNNNNNGG 6 cut(s) 309, 418, 495, 564, 729, 964
BsmAI GTCTC 1 cut(s) 330
BsmFI GGGAC 1 cut(s) 712
BsnI GGCC 4 cut(s) 332, 568, 801, 1003
Bso31I GGTCTC 1 cut(s) 330
Bsp1286I GDGCHC 2 cut(s) 411, 945
Bsp143I GATC 4 cut(s) 112, 196, 269, 895
Bsp19I CCATGG 1 cut(s) 494
BspACI CCGC 3 cut(s) 47, 227, 467
BspANI GGCC 4 cut(s) 332, 568, 801, 1003
BspLI GGNNCC 1 cut(s) 710
BspPI GGATC 2 cut(s) 191, 890
BspT107I GGYRCC 1 cut(s) 708
BspTNI GGTCTC 1 cut(s) 330
BsrDI GCAATG 3 cut(s) 117, 513, 619
BsrFI RCCGGY 1 cut(s) 418
BsrI ACTGG 2 cut(s) 64, 969
BssAI RCCGGY 1 cut(s) 418
BssECI CCNNGG 2 cut(s) 494, 907
BssMI GATC 4 cut(s) 112, 196, 269, 895
BssT1I CCWWGG 2 cut(s) 494, 907
Bst4CI ACNGT 2 cut(s) 648, 889
BstC8I GCNNGC 1 cut(s) 933
BstDEI CTNAG 1 cut(s) 403
BstDSI CCRYGG 1 cut(s) 494
BstENI CCTNNNNNAGG 1 cut(s) 727
BstF5I GGATG 1 cut(s) 5
BstHHI GCGC 1 cut(s) 513
BstKTI GATC 4 cut(s) 115, 199, 272, 898
BstMAI GTCTC 1 cut(s) 330
BstMBI GATC 4 cut(s) 112, 196, 269, 895
BstSCI CCNGG 1 cut(s) 563
BstV1I GCAGC 4 cut(s) 378, 383, 386, 495
BstX2I RGATCY 2 cut(s) 112, 895
BstYI RGATCY 2 cut(s) 112, 895
BsuRI GGCC 4 cut(s) 332, 568, 801, 1003
BtgI CCRYGG 1 cut(s) 494
BtsCI GGATG 1 cut(s) 5
BtsI GCAGTG 1 cut(s) 23
BtsIMutI CAGTG 3 cut(s) 23, 644, 962
Cac8I GCNNGC 1 cut(s) 933
CfoI GCGC 1 cut(s) 513
Cfr10I RCCGGY 1 cut(s) 418
Csp6I GTAC 2 cut(s) 297, 709
CviAII CATG 7 cut(s) 33, 126, 495, 677, 727, 863, 975
CviQI GTAC 2 cut(s) 297, 709
DdeI CTNAG 1 cut(s) 403
DpnI GATC 4 cut(s) 114, 198, 271, 897
DpnII GATC 4 cut(s) 112, 196, 269, 895
EaeI YGGCCR 2 cut(s) 330, 566
EciI GGCGGA 1 cut(s) 242
Ecl136II GAGCTC 1 cut(s) 409
Eco130I CCWWGG 2 cut(s) 494, 907
Eco24I GRGCYC 1 cut(s) 411
Eco31I GGTCTC 1 cut(s) 330
Eco53kI GAGCTC 1 cut(s) 409
EcoICRI GAGCTC 1 cut(s) 409
EcoNI CCTNNNNNAGG 1 cut(s) 727
EcoT14I CCWWGG 2 cut(s) 494, 907
EcoT38I GRGCYC 1 cut(s) 411
ErhI CCWWGG 2 cut(s) 494, 907
FaeI CATG 7 cut(s) 36, 129, 498, 680, 730, 866, 978
FalI AAGNNNNNCTT 2 cut(s) 798, 830
FaqI GGGAC 1 cut(s) 712
FatI CATG 7 cut(s) 32, 125, 494, 676, 726, 862, 974
FauI CCCGC 1 cut(s) 460
FauNDI CATATG 2 cut(s) 703, 850
Fnu4HI GCNGC 4 cut(s) 367, 397, 400, 509
FriOI GRGCYC 1 cut(s) 411
Fsp4HI GCNGC 4 cut(s) 367, 397, 400, 509
FspBI CTAG 6 cut(s) 260, 321, 425, 459, 867, 959
FspI TGCGCA 1 cut(s) 512
GlaI GCGC 1 cut(s) 512
GluI GCNGC 4 cut(s) 367, 397, 400, 509
HaeIII GGCC 4 cut(s) 332, 568, 801, 1003
HapII CCGG 2 cut(s) 419, 565
HhaI GCGC 1 cut(s) 513
Hin1II CATG 7 cut(s) 36, 129, 498, 680, 730, 866, 978
Hin6I GCGC 1 cut(s) 511
HinP1I GCGC 1 cut(s) 511
HincII GTYRAC 1 cut(s) 795
HindII GTYRAC 1 cut(s) 795
HindIII AAGCTT 2 cut(s) 13, 629
HinfI GANTC 2 cut(s) 836, 880
HpaII CCGG 2 cut(s) 419, 565
Hpy166II GTNNAC 1 cut(s) 795
Hpy188I TCNGA 4 cut(s) 627, 748, 879, 885
Hpy188III TCNNGA 3 cut(s) 164, 260, 338
Hpy8I GTNNAC 1 cut(s) 795
HpyAV CCTTC 3 cut(s) 210, 440, 568
HpyCH4III ACNGT 2 cut(s) 648, 889
HpyCH4IV ACGT 1 cut(s) 859
HpyF3I CTNAG 1 cut(s) 403
HpySE526I ACGT 1 cut(s) 859
Hsp92II CATG 7 cut(s) 36, 129, 498, 680, 730, 866, 978
HspAI GCGC 1 cut(s) 511
KpnI GGTACC 1 cut(s) 712
Kzo9I GATC 4 cut(s) 112, 196, 269, 895
LmnI GCTCC 2 cut(s) 414, 476
Lsp1109I GCAGC 4 cut(s) 378, 383, 386, 495
MaeI CTAG 6 cut(s) 260, 321, 425, 459, 867, 959
MaeII ACGT 1 cut(s) 859
MaeIII GTNAC 3 cut(s) 236, 338, 737
MalI GATC 4 cut(s) 114, 198, 271, 897
MboI GATC 4 cut(s) 112, 196, 269, 895
MboII GAAGA 2 cut(s) 122, 935
MflI RGATCY 2 cut(s) 112, 895
MhlI GDGCHC 2 cut(s) 411, 945
MlsI TGGCCA 1 cut(s) 332
MluCI AATT 8 cut(s) 101, 147, 230, 273, 532, 537, 570, 830
MluNI TGGCCA 1 cut(s) 332
MlyI GAGTC 1 cut(s) 845
MnlI CCTC 3 cut(s) 604, 672, 723
Mox20I TGGCCA 1 cut(s) 332
MroXI GAANNNNTTC 1 cut(s) 450
MscI TGGCCA 1 cut(s) 332
MseI TTAA 3 cut(s) 38, 282, 383
MslI CAYNNNNRTG 3 cut(s) 375, 867, 973
Msp20I TGGCCA 1 cut(s) 332
MspA1I CMGCKG 1 cut(s) 47
MspI CCGG 2 cut(s) 419, 565
MspR9I CCNGG 1 cut(s) 565
NciI CCSGG 1 cut(s) 565
NcoI CCATGG 1 cut(s) 494
NdeI CATATG 2 cut(s) 703, 850
NdeII GATC 4 cut(s) 112, 196, 269, 895
NlaIII CATG 7 cut(s) 36, 129, 498, 680, 730, 866, 978
NlaIV GGNNCC 1 cut(s) 710
NmuCI GTSAC 1 cut(s) 338
NsbI TGCGCA 1 cut(s) 512
PdmI GAANNNNTTC 1 cut(s) 450
PfeI GAWTC 1 cut(s) 880
PkrI GCNGC 4 cut(s) 368, 398, 401, 510
PleI GAGTC 1 cut(s) 844
PpsI GAGTC 1 cut(s) 844
PsiI TTATAA 1 cut(s) 347
Psp124BI GAGCTC 1 cut(s) 411
PspN4I GGNNCC 1 cut(s) 710
PsuI RGATCY 2 cut(s) 112, 895
RsaI GTAC 2 cut(s) 298, 710
RsaNI GTAC 2 cut(s) 297, 709
RseI CAYNNNNRTG 3 cut(s) 375, 867, 973
SacI GAGCTC 1 cut(s) 411
SaqAI TTAA 3 cut(s) 38, 282, 383
SatI GCNGC 4 cut(s) 367, 397, 400, 509
Sau3AI GATC 4 cut(s) 112, 196, 269, 895
ScaI AGTACT 1 cut(s) 298
SchI GAGTC 1 cut(s) 845
ScrFI CCNGG 1 cut(s) 565
SduI GDGCHC 2 cut(s) 411, 945
SmiMI CAYNNNNRTG 3 cut(s) 375, 867, 973
SpeI ACTAGT 1 cut(s) 458
Sse9I AATT 8 cut(s) 101, 147, 230, 273, 532, 537, 570, 830
SsiI CCGC 3 cut(s) 47, 227, 467
SspI AATATT 2 cut(s) 81, 502
SspMI CTAG 6 cut(s) 260, 321, 425, 459, 867, 959
SstI GAGCTC 1 cut(s) 411
StyD4I CCNGG 1 cut(s) 563
StyI CCWWGG 2 cut(s) 494, 907
TaaI ACNGT 2 cut(s) 648, 889
TaiI ACGT 1 cut(s) 862
TaqI TCGA 1 cut(s) 839
TaqII GACCGA 1 cut(s) 282
TasI AATT 8 cut(s) 101, 147, 230, 273, 532, 537, 570, 830
TatI WGTACW 1 cut(s) 296
TfiI GAWTC 1 cut(s) 880
Tru1I TTAA 3 cut(s) 38, 282, 383
Tru9I TTAA 3 cut(s) 38, 282, 383
TscAI CASTG 3 cut(s) 30, 651, 969
TseFI GTSAC 1 cut(s) 338
TseI GCWGC 4 cut(s) 366, 396, 399, 508
Tsp45I GTSAC 1 cut(s) 338
TspDTI ATGAA 6 cut(s) 114, 183, 330, 566, 837, 1002
TspRI CASTG 3 cut(s) 30, 651, 969
XagI CCTNNNNNAGG 1 cut(s) 727
XapI RAATTY 3 cut(s) 230, 532, 830
XbaI TCTAGA 1 cut(s) 259
XcmI CCANNNNNNNNNTGG 1 cut(s) 248
XmnI GAANNNNTTC 1 cut(s) 450
XspI CTAG 6 cut(s) 260, 321, 425, 459, 867, 959
ZrmI AGTACT 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.