Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0000327

Physical Location & Seq

Genomic Coordinates Reverse (-)

18052792 .. 18054766

Gene Structure 1975 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1109800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1059 bp

ATGTCATCCAAAGTCTTAAACAGAAAGGAGGAAAGACAGAGATCATTCTTGGATAATGGAAGCATCTTATTGGAGGATCTCATTGCTTCTTGTGATGGAAAATCGAATCCTATTTGTTGTTATTCTGCTGATGAGCTCACGAGGGCAACCAACAACTTTGATCCTTCTTGCATTATGCAAGATTGTTCACCCACTGAAAATAGTCAATTCCCCAGTTCTATACATGTTTATGGTGGTTACAAAATGTTCAGGGGTTTTCTACATGATCGATCAATCATTGTTAAGAAGTTCATGGGGACGGGGGATGAAGCTAAGTCCATGGCCATTCGAGACATTATTATATCAATGCAGATGAGCAACCATAAAAATGTTTTGAAACTCTTGGGCTGCTGCTTGGAGAGTTCTGTACCAGCTCTTGTTCATGAGTATGCGATGGAAGGAGTTCTCAACGATCACGGAGGTCTAGGGGGTAATGAAAATTACTCCTCATTACCATGGAAAACTAGACTGCGTATTGCAAAGCAGCTTGCTAATGCACTTACATATCTCCATACTGCCTTTCCCAGGCCAATCATTCATCGGGATTTAAAACCCAGCTGTATTTTCTTGGGCCATGATTATGTTCCCAAACTCACCAACTTCTCACTCTCCATTTCCATTCCTCCTATGCAGTCTCATGTTGAAGATGATCTGAAAGGGACATTTGGGTACCTTGATCCTTCTTACATGAAGTCTGGTTACATTACAGAAAAAAGTGATGTTTATAGCTTTGGTGTGCATTTACTTGTATTCTTAACGGGACAAAAAGTCGTAGATAAATATGACGCAATAGAATACCAATCAATTATTGCATATGTGAAACAACATGTTAGTGAAATCGGGCAGATTCAGACAATTGTGGACCCTAAAATCAATGAGGATGTAGGGGGAGATGAGAAAGTGCAGCAGCAGTTGCAAGATTTCCTACAACTGGCATTGTCATGCACTCAAGACGAAATTGAAAGAAGGCCATATATGACAGATGTGGCTAGAGAACTTGTTCGAATTGACAAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050829 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

353

Amino Acids

39.68

Weight (kDa)

5.89

Isoelectric Point (pI)

47.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	84 - 344	5.8e-25	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	91 - 341	1.2e-26	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca	FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica	MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica	Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis	pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis	RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata	RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora	Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii	Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa	Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha	Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana	Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	708
AccB1I	GGYRCC	1 cut(s)	708
AclWI	GGATC	3 cut(s)	84, 155, 710
AcoI	YGGCCR	1 cut(s)	321
AfaI	GTAC	2 cut(s)	408, 710
AfiI	CCNNNNNNNGG	2 cut(s)	564, 970
AflIII	ACRYGT	2 cut(s)	223, 865
AgsI	TTSAA	3 cut(s)	376, 683, 1001
AhdI	GACNNNNNGTC	1 cut(s)	806
AjnI	CCWGG	1 cut(s)	563
AluBI	AGCT	6 cut(s)	136, 311, 413, 526, 597, 768
AluI	AGCT	6 cut(s)	136, 311, 413, 526, 597, 768
Alw21I	GWGCWC	1 cut(s)	138
Alw26I	GTCTC	2 cut(s)	324, 678
AlwI	GGATC	3 cut(s)	84, 155, 710
AoxI	GGCC	4 cut(s)	321, 566, 610, 1007
ApeKI	GCWGC	5 cut(s)	387, 390, 523, 943, 946
Asp700I	GAANNNNTTC	2 cut(s)	441, 1038
Asp718I	GGTACC	1 cut(s)	708
AspS9I	GGNCC	2 cut(s)	610, 901
AsuHPI	GGTGA	2 cut(s)	180, 625
AsuII	TTCGAA	1 cut(s)	1042
AvaII	GGWCC	1 cut(s)	901
BalI	TGGCCA	1 cut(s)	323
BanI	GGYRCC	1 cut(s)	708
BanII	GRGCYC	1 cut(s)	138
BarI	GAAGNNNNNNTAC	2 cut(s)	722, 754
BauI	CACGAG	1 cut(s)	139
Bbv12I	GWGCWC	1 cut(s)	138
BbvI	GCAGC	5 cut(s)	374, 377, 535, 955, 958
BccI	CCATC	2 cut(s)	89, 427
BciT130I	CCWGG	1 cut(s)	565
BcoDI	GTCTC	2 cut(s)	324, 678
BfaI	CTAG	3 cut(s)	464, 504, 1029
BisI	GCNGC	5 cut(s)	388, 391, 524, 944, 947
BlsI	GCNGC	5 cut(s)	389, 392, 525, 945, 948
Bme1390I	CCNGG	1 cut(s)	565
Bme18I	GGWCC	1 cut(s)	901
BmeRI	GACNNNNNGTC	1 cut(s)	806
BmgT120I	GGNCC	2 cut(s)	610, 901
BmiI	GGNNCC	2 cut(s)	710, 903
BmrFI	CCNGG	1 cut(s)	565
BmrI	ACTGGG	1 cut(s)	207
BmsI	GCATC	1 cut(s)	72
BmuI	ACTGGG	1 cut(s)	207
Bpu14I	TTCGAA	1 cut(s)	1042
BpuEI	CTTGAG	1 cut(s)	972
Bsa29I	ATCGAT	1 cut(s)	268
BsaJI	CCNNGG	3 cut(s)	318, 494, 563
Bsc4I	CCNNNNNNNGG	2 cut(s)	564, 970
Bse1I	ACTGG	2 cut(s)	213, 975
Bse3DI	GCAATG	1 cut(s)	81
BseBI	CCWGG	1 cut(s)	565
BseCI	ATCGAT	1 cut(s)	268
BseDI	CCNNGG	3 cut(s)	318, 494, 563
BseGI	GGATG	3 cut(s)	5, 310, 925
BseLI	CCNNNNNNNGG	2 cut(s)	564, 970
BseMI	GCAATG	1 cut(s)	81
BseNI	ACTGG	2 cut(s)	213, 975
BseRI	GAGGAG	1 cut(s)	475
BseXI	GCAGC	5 cut(s)	374, 377, 535, 955, 958
BseYI	CCCAGC	1 cut(s)	593
BsgI	GTGCAG	1 cut(s)	962
BshFI	GGCC	4 cut(s)	323, 568, 612, 1009
BshNI	GGYRCC	1 cut(s)	708
BshVI	ATCGAT	1 cut(s)	268
BsiHKAI	GWGCWC	1 cut(s)	138
BslFI	GGGAC	3 cut(s)	310, 712, 813
BslI	CCNNNNNNNGG	2 cut(s)	564, 970
BsmAI	GTCTC	2 cut(s)	324, 678
BsmFI	GGGAC	3 cut(s)	310, 712, 813
BsnI	GGCC	4 cut(s)	323, 568, 612, 1009
Bsp119I	TTCGAA	1 cut(s)	1042
Bsp1286I	GDGCHC	1 cut(s)	138
Bsp143I	GATC	8 cut(s)	41, 76, 160, 265, 269, 451, 688, 715
Bsp19I	CCATGG	2 cut(s)	318, 494
BspANI	GGCC	4 cut(s)	323, 568, 612, 1009
BspDI	ATCGAT	1 cut(s)	268
BspHI	TCATGA	1 cut(s)	421
BspLI	GGNNCC	2 cut(s)	710, 903
BspPI	GGATC	3 cut(s)	84, 155, 710
BspT104I	TTCGAA	1 cut(s)	1042
BspT107I	GGYRCC	1 cut(s)	708
BsrDI	GCAATG	1 cut(s)	81
BsrI	ACTGG	2 cut(s)	213, 975
BssECI	CCNNGG	3 cut(s)	318, 494, 563
BssMI	GATC	8 cut(s)	41, 76, 160, 265, 269, 451, 688, 715
BssSI	CACGAG	1 cut(s)	139
BssT1I	CCWWGG	2 cut(s)	318, 494
Bst2BI	CACGAG	1 cut(s)	139
Bst2UI	CCWGG	1 cut(s)	565
BstAPI	GCANNNNNTGC	1 cut(s)	952
BstBI	TTCGAA	1 cut(s)	1042
BstC8I	GCNNGC	1 cut(s)	528
BstDEI	CTNAG	1 cut(s)	312
BstDSI	CCRYGG	2 cut(s)	318, 494
BstENI	CCTNNNNNAGG	1 cut(s)	562
BstF5I	GGATG	3 cut(s)	5, 310, 925
BstKTI	GATC	8 cut(s)	44, 79, 163, 268, 272, 454, 691, 718
BstMAI	GTCTC	2 cut(s)	324, 678
BstMBI	GATC	8 cut(s)	41, 76, 160, 265, 269, 451, 688, 715
BstMWI	GCNNNNNNNGC	1 cut(s)	952
BstNI	CCWGG	1 cut(s)	565
BstNSI	RCATGY	2 cut(s)	227, 869
BstSCI	CCNGG	1 cut(s)	563
BstV1I	GCAGC	5 cut(s)	374, 377, 535, 955, 958
BstX2I	RGATCY	1 cut(s)	76
BstYI	RGATCY	1 cut(s)	76
Bsu15I	ATCGAT	1 cut(s)	268
BsuRI	GGCC	4 cut(s)	323, 568, 612, 1009
BsuTUI	ATCGAT	1 cut(s)	268
BtgI	CCRYGG	2 cut(s)	318, 494
BtgZI	GCGATG	1 cut(s)	446
BtsCI	GGATG	3 cut(s)	5, 310, 925
BtsIMutI	CAGTG	1 cut(s)	192
Cac8I	GCNNGC	1 cut(s)	528
CciI	TCATGA	1 cut(s)	421
Cfr13I	GGNCC	2 cut(s)	610, 901
ClaI	ATCGAT	1 cut(s)	268
CseI	GACGC	1 cut(s)	833
Csp6I	GTAC	2 cut(s)	407, 709
CviQI	GTAC	2 cut(s)	407, 709
DdeI	CTNAG	1 cut(s)	312
DpnI	GATC	8 cut(s)	43, 78, 162, 267, 271, 453, 690, 717
DpnII	GATC	8 cut(s)	41, 76, 160, 265, 269, 451, 688, 715
DraI	TTTAAA	1 cut(s)	588
DriI	GACNNNNNGTC	1 cut(s)	806
EaeI	YGGCCR	1 cut(s)	321
Eam1105I	GACNNNNNGTC	1 cut(s)	806
Ecl136II	GAGCTC	1 cut(s)	136
Eco130I	CCWWGG	2 cut(s)	318, 494
Eco24I	GRGCYC	1 cut(s)	138
Eco47I	GGWCC	1 cut(s)	901
Eco53kI	GAGCTC	1 cut(s)	136
EcoICRI	GAGCTC	1 cut(s)	136
EcoNI	CCTNNNNNAGG	1 cut(s)	562
EcoRII	CCWGG	1 cut(s)	563
EcoT14I	CCWWGG	2 cut(s)	318, 494
EcoT38I	GRGCYC	1 cut(s)	138
ErhI	CCWWGG	2 cut(s)	318, 494
FaqI	GGGAC	3 cut(s)	310, 712, 813
FauNDI	CATATG	1 cut(s)	853
Fnu4HI	GCNGC	5 cut(s)	388, 391, 524, 944, 947
FokI	GGATG	2 cut(s)	317, 932
FriOI	GRGCYC	1 cut(s)	138
Fsp4HI	GCNGC	5 cut(s)	388, 391, 524, 944, 947
FspBI	CTAG	3 cut(s)	464, 504, 1029
GluI	GCNGC	5 cut(s)	388, 391, 524, 944, 947
GsaI	CCCAGC	1 cut(s)	597
HaeIII	GGCC	4 cut(s)	323, 568, 612, 1009
HgaI	GACGC	1 cut(s)	833
HinfI	GANTC	2 cut(s)	106, 886
HphI	GGTGA	2 cut(s)	180, 625
Hpy166II	GTNNAC	2 cut(s)	188, 901
Hpy188I	TCNGA	2 cut(s)	693, 891
Hpy188III	TCNNGA	5 cut(s)	139, 329, 422, 581, 989
Hpy8I	GTNNAC	2 cut(s)	188, 901
HpyAV	CCTTC	4 cut(s)	174, 431, 729, 999
HpyF10VI	GCNNNNNNNGC	1 cut(s)	952
HpyF3I	CTNAG	1 cut(s)	312
KpnI	GGTACC	1 cut(s)	712
Kzo9I	GATC	8 cut(s)	41, 76, 160, 265, 269, 451, 688, 715
LpnPI	CCDG	8 cut(s)	226, 235, 423, 550, 577, 607, 720, 956
Lsp1109I	GCAGC	5 cut(s)	374, 377, 535, 955, 958
LweI	GCATC	1 cut(s)	72
MaeI	CTAG	3 cut(s)	464, 504, 1029
MaeIII	GTNAC	2 cut(s)	236, 737
MalI	GATC	8 cut(s)	43, 78, 162, 267, 271, 453, 690, 717
MboI	GATC	8 cut(s)	41, 76, 160, 265, 269, 451, 688, 715
MboII	GAAGA	1 cut(s)	695
MfeI	CAATTG	1 cut(s)	894
MflI	RGATCY	1 cut(s)	76
MhlI	GDGCHC	1 cut(s)	138
MlsI	TGGCCA	1 cut(s)	323
MluCI	AATT	6 cut(s)	206, 478, 843, 894, 996, 1044
MluNI	TGGCCA	1 cut(s)	323
MnlI	CCTC	7 cut(s)	22, 67, 135, 452, 496, 672, 910
Mox20I	TGGCCA	1 cut(s)	323
MroXI	GAANNNNTTC	2 cut(s)	441, 1038
MscI	TGGCCA	1 cut(s)	323
MseI	TTAA	4 cut(s)	17, 282, 587, 794
MslI	CAYNNNNRTG	7 cut(s)	228, 366, 426, 493, 618, 870, 979
Msp20I	TGGCCA	1 cut(s)	323
MspA1I	CMGCKG	1 cut(s)	597
MspR9I	CCNGG	1 cut(s)	565
MunI	CAATTG	1 cut(s)	894
MvaI	CCWGG	1 cut(s)	565
MwoI	GCNNNNNNNGC	1 cut(s)	952
NcoI	CCATGG	2 cut(s)	318, 494
NdeI	CATATG	1 cut(s)	853
NdeII	GATC	8 cut(s)	41, 76, 160, 265, 269, 451, 688, 715
NlaIV	GGNNCC	2 cut(s)	710, 903
NspI	RCATGY	2 cut(s)	227, 869
NspV	TTCGAA	1 cut(s)	1042
PagI	TCATGA	1 cut(s)	421
PciI	ACATGT	2 cut(s)	223, 865
PdmI	GAANNNNTTC	2 cut(s)	441, 1038
PfeI	GAWTC	2 cut(s)	106, 886
PkrI	GCNGC	5 cut(s)	389, 392, 525, 945, 948
PscI	ACATGT	2 cut(s)	223, 865
Psp124BI	GAGCTC	1 cut(s)	138
Psp6I	CCWGG	1 cut(s)	563
PspFI	CCCAGC	1 cut(s)	593
PspGI	CCWGG	1 cut(s)	563
PspN4I	GGNNCC	2 cut(s)	710, 903
PspPI	GGNCC	2 cut(s)	610, 901
PsuI	RGATCY	1 cut(s)	76
PvuII	CAGCTG	1 cut(s)	597
RsaI	GTAC	2 cut(s)	408, 710
RsaNI	GTAC	2 cut(s)	407, 709
RseI	CAYNNNNRTG	7 cut(s)	228, 366, 426, 493, 618, 870, 979
SacI	GAGCTC	1 cut(s)	138
SaqAI	TTAA	4 cut(s)	17, 282, 587, 794
SatI	GCNGC	5 cut(s)	388, 391, 524, 944, 947
Sau3AI	GATC	8 cut(s)	41, 76, 160, 265, 269, 451, 688, 715
Sau96I	GGNCC	2 cut(s)	610, 901
ScrFI	CCNGG	1 cut(s)	565
SduI	GDGCHC	1 cut(s)	138
SetI	ASST	8 cut(s)	138, 313, 415, 463, 528, 599, 714, 770
SfaNI	GCATC	1 cut(s)	72
SfuI	TTCGAA	1 cut(s)	1042
SinI	GGWCC	1 cut(s)	901
SmiMI	CAYNNNNRTG	7 cut(s)	228, 366, 426, 493, 618, 870, 979
SmlI	CTYRAG	1 cut(s)	987
SmoI	CTYRAG	1 cut(s)	987
Sse9I	AATT	6 cut(s)	206, 478, 843, 894, 996, 1044
SspMI	CTAG	3 cut(s)	464, 504, 1029
SstI	GAGCTC	1 cut(s)	138
StyD4I	CCNGG	1 cut(s)	563
StyI	CCWWGG	2 cut(s)	318, 494
TaqI	TCGA	4 cut(s)	104, 268, 328, 1042
TasI	AATT	6 cut(s)	206, 478, 843, 894, 996, 1044
TfiI	GAWTC	2 cut(s)	106, 886
Tru1I	TTAA	4 cut(s)	17, 282, 587, 794
Tru9I	TTAA	4 cut(s)	17, 282, 587, 794
TscAI	CASTG	1 cut(s)	199
TseI	GCWGC	5 cut(s)	387, 390, 523, 943, 946
TspDTI	ATGAA	6 cut(s)	280, 321, 410, 489, 566, 743
TspGWI	ACGGA	1 cut(s)	471
TspRI	CASTG	1 cut(s)	199
VpaK11BI	GGWCC	1 cut(s)	901
XagI	CCTNNNNNAGG	1 cut(s)	562
XceI	RCATGY	2 cut(s)	227, 869
XmnI	GAANNNNTTC	2 cut(s)	441, 1038
XspI	CTAG	3 cut(s)	464, 504, 1029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.