pycom05g10200

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
13557464 .. 13558480
1017 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g10200.1

Sequence Viewer

Length: 1017 bp
ATGGTGGCATTGCAGTGGCATTGCAATACAGGGTCAATTCTACGATATGTTATGGTATCAAAGTACTGCATTCGGAGCTGGTCAAATGAGGATAGGGATAGGTCTTGCGTTATTCGTGACATTGACATTTCATTACAGATGAGCAACCATGATAATGTTTTGAAACTCTTGGGCTGCGGCTTAGAGTTCCCCATACCAGTGCTGGTGCATGCATACGCAGCAAAAGGAGTTCTCAACCATGATGGAAGTTTAAGAGGGGATAATGAAGATCAAATCATACTACCATGGAACATTAGATTGCGTATTGCAAAGCAGCTTGTCAGTACAGTTTCATATCTCCATACCCCTTTTGCCGAACCCATCATTCAAAGGTATCTAAACCCCAGCTGCCTGTTCTTGGATGATGACTATGTTTCCAAACTTTACAGCTTCTCGCATTCTACAACCATTCCTCCTACGGAAAAGGATGTTGAAGATTCTGTTGGAGGGAAACCCGGGTACCTTGAGCCTGCCTACATGCGGCCTGGTCTCATTTCAGAAAAAAAAACTGATGTTTACAGCTTTGGTATTCTTTTAGTTGTTTTCCTGACAGGACGAACACCTTGGGAGCGGGTGGAAGGAATTGAAATAATTCCATATGCTAGTGGTTGTGATGGCCGAATTGGGGAAATTCTTGATCCGAGAATCTATGAGGAAGTGAGGGGAAATGAGCAAGTACAACAGCAGTCGCATGATTTCCTTGAACTGGCATTGTTAAGCACTCGAGATGACATTGAAGGAAGGCCATACATGGTGGATGTGGCTAGAGAACTCATTCGAATTGAAGAATTTGTTTTGGCCAGCTGGCTTCGATCCACTAAATTTGTTATCAAAAGTATTGGATACTGGTTTAACGGCAATTCTAATGTTTGTAATCTGATCGTTCTCTTGGTAGGCCTTTTGTCAAAGGATCAACTATATTTTCCTCCACCATATATATTAATTATCACACCCCCAAAGTCCAAACTCAAGGTTTGA

Protein Analysis

339

Amino Acids

38.48

Weight (kDa)

5.71

Isoelectric Point (pI)

44.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 28 - 248 2.4e-14 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 32 - 213 5.5e-09 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 498
AccB1I GGYRCC 1 cut(s) 498
AccBSI CCGCTC 1 cut(s) 610
AciI CCGC 3 cut(s) 177, 520, 610
AclWI GGATC 3 cut(s) 671, 846, 957
AcoI YGGCCR 2 cut(s) 655, 837
AcsI RAATTY 3 cut(s) 669, 827, 860
AfaI GTAC 4 cut(s) 65, 325, 500, 717
AfiI CCNNNNNNNGG 4 cut(s) 397, 519, 664, 745
AgsI TTSAA 7 cut(s) 163, 368, 473, 626, 743, 776, 824
AjnI CCWGG 1 cut(s) 523
AjuI GAANNNNNNNTTGG 2 cut(s) 465, 497
AluBI AGCT 6 cut(s) 78, 316, 387, 429, 561, 843
AluI AGCT 6 cut(s) 78, 316, 387, 429, 561, 843
Alw26I GTCTC 1 cut(s) 533
AlwI GGATC 3 cut(s) 671, 846, 957
Ama87I CYCGRG 2 cut(s) 494, 762
AoxI GGCC 5 cut(s) 521, 655, 782, 837, 934
ApeKI GCWGC 4 cut(s) 174, 218, 313, 387
ApoI RAATTY 3 cut(s) 669, 827, 860
AseI ATTAAT 1 cut(s) 980
Asp700I GAANNNNTTC 2 cut(s) 630, 813
Asp718I GGTACC 1 cut(s) 498
AsuC2I CCSGG 2 cut(s) 495, 496
AsuII TTCGAA 1 cut(s) 817
AvaI CYCGRG 2 cut(s) 494, 762
BaeI ACNNNNGTAYC 2 cut(s) 482, 515
BalI TGGCCA 1 cut(s) 839
BanI GGYRCC 1 cut(s) 498
BbvI GCAGC 4 cut(s) 161, 230, 325, 374
BccI CCATC 3 cut(s) 236, 368, 647
BceAI ACGGC 1 cut(s) 910
BciT130I CCWGG 1 cut(s) 525
BciVI GTATCC 1 cut(s) 875
BcnI CCSGG 2 cut(s) 495, 496
BcoDI GTCTC 1 cut(s) 533
BfaI CTAG 2 cut(s) 642, 804
BfuI GTATCC 1 cut(s) 875
BisI GCNGC 6 cut(s) 175, 178, 219, 314, 388, 521
BlsI GCNGC 6 cut(s) 176, 179, 220, 315, 389, 522
BmcAI AGTACT 1 cut(s) 65
Bme1390I CCNGG 3 cut(s) 495, 496, 525
BmeT110I CYCGRG 2 cut(s) 494, 762
BmiI GGNNCC 1 cut(s) 500
BmrFI CCNGG 3 cut(s) 495, 496, 525
Bpu14I TTCGAA 1 cut(s) 817
BpuEI CTTGAG 2 cut(s) 524, 992
BpuMI CCSGG 2 cut(s) 495, 496
BsaI GGTCTC 1 cut(s) 533
BsaJI CCNNGG 3 cut(s) 284, 494, 602
BsaXI ACNNNNNCTCC 2 cut(s) 436, 466
Bsc4I CCNNNNNNNGG 4 cut(s) 397, 519, 664, 745
Bse1I ACTGG 3 cut(s) 197, 750, 890
Bse3DI GCAATG 2 cut(s) 8, 19
BseBI CCWGG 1 cut(s) 525
BseDI CCNNGG 3 cut(s) 284, 494, 602
BseGI GGATG 3 cut(s) 406, 472, 802
BseLI CCNNNNNNNGG 4 cut(s) 397, 519, 664, 745
BseMI GCAATG 2 cut(s) 8, 19
BseNI ACTGG 3 cut(s) 197, 750, 890
BseXI GCAGC 4 cut(s) 161, 230, 325, 374
BseYI CCCAGC 1 cut(s) 383
BshFI GGCC 5 cut(s) 523, 657, 784, 839, 936
BshNI GGYRCC 1 cut(s) 498
BsiHKCI CYCGRG 2 cut(s) 494, 762
BsiSI CCGG 1 cut(s) 495
BslI CCNNNNNNNGG 4 cut(s) 397, 519, 664, 745
BsmAI GTCTC 1 cut(s) 533
BsmI GAATGC 2 cut(s) 69, 436
BsnI GGCC 5 cut(s) 523, 657, 784, 839, 936
Bso31I GGTCTC 1 cut(s) 533
BsoBI CYCGRG 2 cut(s) 494, 762
Bsp119I TTCGAA 1 cut(s) 817
Bsp143I GATC 5 cut(s) 268, 676, 851, 918, 949
Bsp19I CCATGG 1 cut(s) 284
BspACI CCGC 3 cut(s) 177, 520, 610
BspANI GGCC 5 cut(s) 523, 657, 784, 839, 936
BspLI GGNNCC 1 cut(s) 500
BspPI GGATC 3 cut(s) 671, 846, 957
BspT104I TTCGAA 1 cut(s) 817
BspT107I GGYRCC 1 cut(s) 498
BspTNI GGTCTC 1 cut(s) 533
BsrBI CCGCTC 1 cut(s) 610
BsrDI GCAATG 2 cut(s) 8, 19
BsrI ACTGG 3 cut(s) 197, 750, 890
BssECI CCNNGG 3 cut(s) 284, 494, 602
BssMI GATC 5 cut(s) 268, 676, 851, 918, 949
BssT1I CCWWGG 2 cut(s) 284, 602
Bst2UI CCWGG 1 cut(s) 525
Bst4CI ACNGT 1 cut(s) 328
BstBI TTCGAA 1 cut(s) 817
BstC8I GCNNGC 4 cut(s) 210, 510, 841, 845
BstDEI CTNAG 1 cut(s) 181
BstDSI CCRYGG 1 cut(s) 284
BstF5I GGATG 3 cut(s) 406, 472, 802
BstKTI GATC 5 cut(s) 271, 679, 854, 921, 952
BstMAI GTCTC 1 cut(s) 533
BstMBI GATC 5 cut(s) 268, 676, 851, 918, 949
BstMWI GCNNNNNNNGC 2 cut(s) 75, 218
BstNI CCWGG 1 cut(s) 525
BstNSI RCATGY 2 cut(s) 212, 520
BstSCI CCNGG 3 cut(s) 493, 494, 523
BstV1I GCAGC 4 cut(s) 161, 230, 325, 374
BsuI GTATCC 1 cut(s) 875
BsuRI GGCC 5 cut(s) 523, 657, 784, 839, 936
BtgI CCRYGG 1 cut(s) 284
BtsCI GGATG 3 cut(s) 406, 472, 802
BtsI GCAGTG 1 cut(s) 20
BtsIMutI CAGTG 2 cut(s) 20, 204
Cac8I GCNNGC 4 cut(s) 210, 510, 841, 845
Cfr9I CCCGGG 1 cut(s) 494
Csp6I GTAC 4 cut(s) 64, 324, 499, 716
CspCI CAANNNNNGTGG 2 cut(s) 844, 879
CviAII CATG 7 cut(s) 149, 209, 239, 285, 517, 731, 790
CviQI GTAC 4 cut(s) 64, 324, 499, 716
DdeI CTNAG 1 cut(s) 181
DpnI GATC 5 cut(s) 270, 678, 853, 920, 951
DpnII GATC 5 cut(s) 268, 676, 851, 918, 949
EaeI YGGCCR 2 cut(s) 655, 837
Eco130I CCWWGG 2 cut(s) 284, 602
Eco147I AGGCCT 1 cut(s) 936
Eco31I GGTCTC 1 cut(s) 533
Eco88I CYCGRG 2 cut(s) 494, 762
EcoRII CCWGG 1 cut(s) 523
EcoT14I CCWWGG 2 cut(s) 284, 602
EcoT22I ATGCAT 1 cut(s) 214
ErhI CCWWGG 2 cut(s) 284, 602
FaeI CATG 7 cut(s) 152, 212, 242, 288, 520, 734, 793
FatI CATG 7 cut(s) 148, 208, 238, 284, 516, 730, 789
FauI CCCGC 1 cut(s) 603
FauNDI CATATG 1 cut(s) 637
Fnu4HI GCNGC 6 cut(s) 175, 178, 219, 314, 388, 521
FokI GGATG 3 cut(s) 413, 479, 809
Fsp4HI GCNGC 6 cut(s) 175, 178, 219, 314, 388, 521
FspBI CTAG 2 cut(s) 642, 804
GluI GCNGC 6 cut(s) 175, 178, 219, 314, 388, 521
GsaI CCCAGC 1 cut(s) 387
HaeIII GGCC 5 cut(s) 523, 657, 784, 839, 936
HapII CCGG 1 cut(s) 495
Hin1II CATG 7 cut(s) 152, 212, 242, 288, 520, 734, 793
HinfI GANTC 2 cut(s) 476, 684
HpaII CCGG 1 cut(s) 495
Hpy166II GTNNAC 1 cut(s) 556
Hpy188I TCNGA 4 cut(s) 75, 538, 681, 918
Hpy188III TCNNGA 4 cut(s) 116, 586, 674, 764
Hpy8I GTNNAC 1 cut(s) 556
HpyAV CCTTC 3 cut(s) 611, 770, 774
HpyCH4III ACNGT 1 cut(s) 328
HpyCH4V TGCA 6 cut(s) 13, 24, 69, 208, 212, 308
HpyF10VI GCNNNNNNNGC 2 cut(s) 75, 218
HpyF3I CTNAG 1 cut(s) 181
Hsp92II CATG 7 cut(s) 152, 212, 242, 288, 520, 734, 793
KpnI GGTACC 1 cut(s) 502
Kzo9I GATC 5 cut(s) 268, 676, 851, 918, 949
LmnI GCTCC 2 cut(s) 75, 607
Lsp1109I GCAGC 4 cut(s) 161, 230, 325, 374
MaeI CTAG 2 cut(s) 642, 804
MaeIII GTNAC 1 cut(s) 116
MalI GATC 5 cut(s) 270, 678, 853, 920, 951
MbiI CCGCTC 1 cut(s) 610
MboI GATC 5 cut(s) 268, 676, 851, 918, 949
MboII GAAGA 3 cut(s) 278, 485, 836
MlsI TGGCCA 1 cut(s) 839
MluNI TGGCCA 1 cut(s) 839
MmeI TCCRAC 1 cut(s) 463
MnlI CCTC 7 cut(s) 82, 248, 462, 479, 685, 693, 975
Mox20I TGGCCA 1 cut(s) 839
Mph1103I ATGCAT 1 cut(s) 214
MroXI GAANNNNTTC 2 cut(s) 630, 813
MscI TGGCCA 1 cut(s) 839
MseI TTAA 4 cut(s) 251, 755, 891, 980
MslI CAYNNNNRTG 3 cut(s) 13, 153, 197
Msp20I TGGCCA 1 cut(s) 839
MspA1I CMGCKG 2 cut(s) 387, 843
MspI CCGG 1 cut(s) 495
MspR9I CCNGG 3 cut(s) 495, 496, 525
Mva1269I GAATGC 2 cut(s) 69, 436
MvaI CCWGG 1 cut(s) 525
MwoI GCNNNNNNNGC 2 cut(s) 75, 218
NciI CCSGG 2 cut(s) 495, 496
NcoI CCATGG 1 cut(s) 284
NdeI CATATG 1 cut(s) 637
NdeII GATC 5 cut(s) 268, 676, 851, 918, 949
NlaIII CATG 7 cut(s) 152, 212, 242, 288, 520, 734, 793
NlaIV GGNNCC 1 cut(s) 500
NmuCI GTSAC 1 cut(s) 116
NsiI ATGCAT 1 cut(s) 214
NspI RCATGY 2 cut(s) 212, 520
NspV TTCGAA 1 cut(s) 817
PaeI GCATGC 1 cut(s) 212
PaeR7I CTCGAG 1 cut(s) 762
PceI AGGCCT 1 cut(s) 936
PctI GAATGC 2 cut(s) 69, 436
PdmI GAANNNNTTC 2 cut(s) 630, 813
PfeI GAWTC 2 cut(s) 476, 684
PkrI GCNGC 6 cut(s) 176, 179, 220, 315, 389, 522
PshBI ATTAAT 1 cut(s) 980
Psp6I CCWGG 1 cut(s) 523
PspFI CCCAGC 1 cut(s) 383
PspGI CCWGG 1 cut(s) 523
PspN4I GGNNCC 1 cut(s) 500
PvuII CAGCTG 2 cut(s) 387, 843
RsaI GTAC 4 cut(s) 65, 325, 500, 717
RsaNI GTAC 4 cut(s) 64, 324, 499, 716
RseI CAYNNNNRTG 3 cut(s) 13, 153, 197
SaqAI TTAA 4 cut(s) 251, 755, 891, 980
SatI GCNGC 6 cut(s) 175, 178, 219, 314, 388, 521
Sau3AI GATC 5 cut(s) 268, 676, 851, 918, 949
ScaI AGTACT 1 cut(s) 65
ScrFI CCNGG 3 cut(s) 495, 496, 525
Sfr274I CTCGAG 1 cut(s) 762
SfuI TTCGAA 1 cut(s) 817
SlaI CTCGAG 1 cut(s) 762
SmaI CCCGGG 1 cut(s) 496
SmiMI CAYNNNNRTG 3 cut(s) 13, 153, 197
SmlI CTYRAG 3 cut(s) 503, 762, 1007
SmoI CTYRAG 3 cut(s) 503, 762, 1007
SphI GCATGC 1 cut(s) 212
SseBI AGGCCT 1 cut(s) 936
SsiI CCGC 3 cut(s) 177, 520, 610
SspMI CTAG 2 cut(s) 642, 804
StuI AGGCCT 1 cut(s) 936
StyD4I CCNGG 3 cut(s) 493, 494, 523
StyI CCWWGG 2 cut(s) 284, 602
TaaI ACNGT 1 cut(s) 328
TaqI TCGA 3 cut(s) 763, 817, 850
TatI WGTACW 3 cut(s) 63, 323, 715
TauI GCSGC 2 cut(s) 180, 523
TfiI GAWTC 2 cut(s) 476, 684
Tru1I TTAA 4 cut(s) 251, 755, 891, 980
Tru9I TTAA 4 cut(s) 251, 755, 891, 980
TscAI CASTG 2 cut(s) 20, 204
TseFI GTSAC 1 cut(s) 116
TseI GCWGC 4 cut(s) 174, 218, 313, 387
Tsp45I GTSAC 1 cut(s) 116
TspDTI ATGAA 3 cut(s) 120, 279, 321
TspGWI ACGGA 1 cut(s) 473
TspMI CCCGGG 1 cut(s) 494
TspRI CASTG 2 cut(s) 20, 204
VspI ATTAAT 1 cut(s) 980
XapI RAATTY 3 cut(s) 669, 827, 860
XceI RCATGY 2 cut(s) 212, 520
XcmI CCANNNNNNNNNTGG 1 cut(s) 199
XhoI CTCGAG 1 cut(s) 762
XmaI CCCGGG 1 cut(s) 494
XmnI GAANNNNTTC 2 cut(s) 630, 813
XspI CTAG 2 cut(s) 642, 804
ZrmI AGTACT 1 cut(s) 65
Zsp2I ATGCAT 1 cut(s) 214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.