RLG00000015148
NAC Family

Inactive serine threonine-protein kinase At1g67470-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
62276178 .. 62279570
3393 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015148

Sequence Viewer

Length: 1026 bp
ATGCAAGTCATCTGGCACATAACAGGAAACGGAGGAAGCAAACTTCAGCTGGCAGATGCAATCGGTGGTGAACAAGGCCGAGAAATCAACACTTTACAGTTCAATTGGAGCAATTTAAATCCATTTCCGAGGGGTCTGCAGGGTGCTGCTCAGAAAAGAATACTGAAACAATGTCATCCAAATACTTGTGATTTTTCGGCTCTGGATCGACAGATATCTCTGGGGCGTGGTGGTGCAGTCTGGTGGGTCTCGTGGGCAGATCGACGGGGTTGCAGATTGAGGGCACTGGGTTGGGGCAGTTTCGATTTCGGGGCGGCGTGGACCGTGGAGCGTCGTGTTGTGGAGTCGAGGCGGTTTCGACTTGGGTGGCGGAATCATGGAGCGCTGGGTCGTGGTAGGGTCCGTGGTGGTGTCGCGTTGTGCCGGTGGGTATCTTGCAGGAGTGGGCGTGGGGTCTCATTGCTATCATGTTTGAGAAAGGAGGAAATAGATACTCATAGATCGTCATTCTTGGAAAATGGAAGCATATTATTAGAGGATCTCATTGCTTCTTGCAATGGAAAATCTAATCCCATTCGAAATTACTGTGCCGATGAACTCATGAGGGCAACCAACAATTTTGATCCTTCTGGCATGATGCAACATGATTCATCATTCAAAATGTTCCAGGGTTTTCTTGACAACCGGTCAGTTATCATTAAAAAGTACTTCACTGTGCACTGGCTTGCTCCGGAGCAAACTAGGTCTATGGAAATTCGAGACATTGTCATTTCAATACAGATGAGCACCCACAAAAATGTTTTGAAACTCTTGGGATGCTGCTTTGAGTTCCCTATACCAGCTCTGGTGTATGAATATGCAGCAAAGGGAGTTCTTAACTCTGAAGGAGACAATGACTATGTCCCCAAAATCTGCAGCTTTGCAGTTTCCATAACCATTCCGCCTATGCAATCACATGTTTATGCTGATGTGATATATGCATCTGGGAAAAGAAGTCGTGGGAAGAAATCAGGCAGGAGAATATGA

Protein Analysis

342

Amino Acids

38.35

Weight (kDa)

9.72

Isoelectric Point (pI)

46.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 416
AccIII TCCGGA 1 cut(s) 730
AciI CCGC 4 cut(s) 314, 352, 370, 941
AclWI GGATC 3 cut(s) 213, 546, 617
AcsI RAATTY 1 cut(s) 753
AcuI CTGAAG 2 cut(s) 29, 903
AfaI GTAC 1 cut(s) 707
AfeI AGCGCT 1 cut(s) 384
AflIII ACRYGT 1 cut(s) 955
AgeI ACCGGT 1 cut(s) 684
AgsI TTSAA 4 cut(s) 103, 658, 774, 805
AhdI GACNNNNNGTC 1 cut(s) 685
AjnI CCWGG 1 cut(s) 666
AluBI AGCT 3 cut(s) 49, 842, 918
AluI AGCT 3 cut(s) 49, 842, 918
Alw21I GWGCWC 2 cut(s) 720, 788
Alw26I GTCTC 4 cut(s) 253, 460, 753, 882
Alw44I GTGCAC 1 cut(s) 716
AlwI GGATC 3 cut(s) 213, 546, 617
Aor13HI TCCGGA 1 cut(s) 730
Aor51HI AGCGCT 1 cut(s) 384
AoxI GGCC 1 cut(s) 76
ApaLI GTGCAC 1 cut(s) 716
ApeKI GCWGC 4 cut(s) 146, 819, 860, 915
ApoI RAATTY 1 cut(s) 753
AsiGI ACCGGT 1 cut(s) 684
AspLEI GCGC 1 cut(s) 385
AspS9I GGNCC 2 cut(s) 321, 400
AsuHPI GGTGA 1 cut(s) 80
AsuII TTCGAA 1 cut(s) 577
AvaII GGWCC 2 cut(s) 321, 400
BaeGI GKGCMC 2 cut(s) 286, 720
BauI CACGAG 1 cut(s) 250
Bbv12I GWGCWC 2 cut(s) 720, 788
BbvI GCAGC 4 cut(s) 133, 806, 872, 927
BcgI CGANNNNNNTGC 4 cut(s) 118, 152, 252, 286
BciT130I CCWGG 1 cut(s) 668
BcoDI GTCTC 4 cut(s) 253, 460, 753, 882
BfaI CTAG 1 cut(s) 741
BfmI CTRYAG 2 cut(s) 137, 913
BfoI RGCGCY 1 cut(s) 386
BisI GCNGC 5 cut(s) 147, 315, 820, 861, 916
BlsI GCNGC 5 cut(s) 148, 316, 821, 862, 917
BmcAI AGTACT 1 cut(s) 707
Bme1390I CCNGG 1 cut(s) 668
Bme18I GGWCC 2 cut(s) 321, 400
BmeRI GACNNNNNGTC 1 cut(s) 685
BmgT120I GGNCC 2 cut(s) 321, 400
BmiI GGNNCC 1 cut(s) 401
BmrFI CCNGG 1 cut(s) 668
BmrI ACTGGG 1 cut(s) 296
BmsI GCATC 4 cut(s) 46, 627, 806, 989
BmuI ACTGGG 1 cut(s) 296
Bpu14I TTCGAA 1 cut(s) 577
BsaI GGTCTC 2 cut(s) 253, 460
BsaJI CCNNGG 4 cut(s) 128, 324, 403, 667
BsaWI WCCGGW 2 cut(s) 684, 730
BsaXI ACNNNNNCTCC 2 cut(s) 433, 463
Bse118I RCCGGY 2 cut(s) 423, 684
Bse1I ACTGG 2 cut(s) 291, 725
Bse3DI GCAATG 3 cut(s) 458, 543, 562
BseAI TCCGGA 1 cut(s) 730
BseBI CCWGG 1 cut(s) 668
BseDI CCNNGG 4 cut(s) 128, 324, 403, 667
BseGI GGATG 2 cut(s) 175, 821
BseMI GCAATG 3 cut(s) 458, 543, 562
BseMII CTCAG 1 cut(s) 164
BseNI ACTGG 2 cut(s) 291, 725
BseSI GKGCMC 2 cut(s) 286, 720
BseXI GCAGC 4 cut(s) 133, 806, 872, 927
BseYI CCCAGC 1 cut(s) 385
BsgI GTGCAG 1 cut(s) 255
Bsh1236I CGCG 1 cut(s) 416
BshFI GGCC 1 cut(s) 78
BshTI ACCGGT 1 cut(s) 684
BsiHKAI GWGCWC 2 cut(s) 720, 788
BsiSI CCGG 3 cut(s) 424, 685, 731
BslFI GGGAC 1 cut(s) 887
BsmAI GTCTC 4 cut(s) 253, 460, 753, 882
BsmFI GGGAC 1 cut(s) 887
BsnI GGCC 1 cut(s) 78
Bso31I GGTCTC 2 cut(s) 253, 460
Bsp119I TTCGAA 1 cut(s) 577
Bsp1286I GDGCHC 3 cut(s) 286, 720, 788
Bsp13I TCCGGA 1 cut(s) 730
Bsp143I GATC 5 cut(s) 205, 259, 500, 538, 622
BspACI CCGC 4 cut(s) 314, 352, 370, 941
BspANI GGCC 1 cut(s) 78
BspCNI CTCAG 1 cut(s) 163
BspEI TCCGGA 1 cut(s) 730
BspFNI CGCG 1 cut(s) 416
BspHI TCATGA 1 cut(s) 600
BspLI GGNNCC 1 cut(s) 401
BspMAI CTGCAG 2 cut(s) 141, 917
BspPI GGATC 3 cut(s) 213, 546, 617
BspT104I TTCGAA 1 cut(s) 577
BspTNI GGTCTC 2 cut(s) 253, 460
BsrDI GCAATG 3 cut(s) 458, 543, 562
BsrFI RCCGGY 2 cut(s) 423, 684
BsrI ACTGG 2 cut(s) 291, 725
BssAI RCCGGY 2 cut(s) 423, 684
BssECI CCNNGG 4 cut(s) 128, 324, 403, 667
BssMI GATC 5 cut(s) 205, 259, 500, 538, 622
BssSI CACGAG 1 cut(s) 250
Bst2BI CACGAG 1 cut(s) 250
Bst2UI CCWGG 1 cut(s) 668
Bst4CI ACNGT 4 cut(s) 99, 325, 587, 715
BstBI TTCGAA 1 cut(s) 577
BstC8I GCNNGC 2 cut(s) 51, 726
BstDEI CTNAG 1 cut(s) 150
BstDSI CCRYGG 2 cut(s) 324, 403
BstF5I GGATG 2 cut(s) 175, 821
BstFNI CGCG 1 cut(s) 416
BstH2I RGCGCY 1 cut(s) 386
BstHHI GCGC 1 cut(s) 385
BstKTI GATC 5 cut(s) 208, 262, 503, 541, 625
BstMAI GTCTC 4 cut(s) 253, 460, 753, 882
BstMBI GATC 5 cut(s) 205, 259, 500, 538, 622
BstNI CCWGG 1 cut(s) 668
BstNSI RCATGY 1 cut(s) 959
BstSCI CCNGG 1 cut(s) 666
BstSFI CTRYAG 2 cut(s) 137, 913
BstSLI GKGCMC 2 cut(s) 286, 720
BstUI CGCG 1 cut(s) 416
BstV1I GCAGC 4 cut(s) 133, 806, 872, 927
BstX2I RGATCY 1 cut(s) 538
BstYI RGATCY 1 cut(s) 538
BsuRI GGCC 1 cut(s) 78
BtgI CCRYGG 2 cut(s) 324, 403
BtsCI GGATG 2 cut(s) 175, 821
BtsIMutI CAGTG 3 cut(s) 284, 711, 718
Cac8I GCNNGC 2 cut(s) 51, 726
CciI TCATGA 1 cut(s) 600
CfoI GCGC 1 cut(s) 385
Cfr10I RCCGGY 2 cut(s) 423, 684
Cfr13I GGNCC 2 cut(s) 321, 400
CseI GACGC 1 cut(s) 320
Csp6I GTAC 1 cut(s) 706
CspAI ACCGGT 1 cut(s) 684
CviAII CATG 6 cut(s) 377, 468, 601, 634, 644, 956
CviJI RGCY 6 cut(s) 49, 78, 200, 724, 842, 918
CviKI_1 RGCY 6 cut(s) 49, 78, 200, 724, 842, 918
CviQI GTAC 1 cut(s) 706
DdeI CTNAG 1 cut(s) 150
DpnI GATC 5 cut(s) 207, 261, 502, 540, 624
DpnII GATC 5 cut(s) 205, 259, 500, 538, 622
DraI TTTAAA 1 cut(s) 117
DriI GACNNNNNGTC 1 cut(s) 685
Eam1105I GACNNNNNGTC 1 cut(s) 685
EciI GGCGGA 2 cut(s) 385, 930
Eco31I GGTCTC 2 cut(s) 253, 460
Eco32I GATATC 1 cut(s) 216
Eco47I GGWCC 2 cut(s) 321, 400
Eco47III AGCGCT 1 cut(s) 384
Eco57I CTGAAG 2 cut(s) 29, 903
EcoRII CCWGG 1 cut(s) 666
EcoRV GATATC 1 cut(s) 216
EcoT22I ATGCAT 1 cut(s) 982
FaeI CATG 6 cut(s) 380, 471, 604, 637, 647, 959
FaqI GGGAC 1 cut(s) 887
FatI CATG 6 cut(s) 376, 467, 600, 633, 643, 955
Fnu4HI GCNGC 5 cut(s) 147, 315, 820, 861, 916
FokI GGATG 2 cut(s) 162, 828
Fsp4HI GCNGC 5 cut(s) 147, 315, 820, 861, 916
FspBI CTAG 1 cut(s) 741
GlaI GCGC 1 cut(s) 384
GluI GCNGC 5 cut(s) 147, 315, 820, 861, 916
GsaI CCCAGC 1 cut(s) 389
HaeII RGCGCY 1 cut(s) 386
HaeIII GGCC 1 cut(s) 78
HapII CCGG 3 cut(s) 424, 685, 731
HgaI GACGC 1 cut(s) 320
HhaI GCGC 1 cut(s) 385
Hin1II CATG 6 cut(s) 380, 471, 604, 637, 647, 959
Hin6I GCGC 1 cut(s) 383
HinP1I GCGC 1 cut(s) 383
HinfI GANTC 3 cut(s) 344, 373, 647
HpaII CCGG 3 cut(s) 424, 685, 731
HphI GGTGA 1 cut(s) 80
Hpy166II GTNNAC 3 cut(s) 71, 321, 718
Hpy188I TCNGA 3 cut(s) 129, 153, 883
Hpy188III TCNNGA 5 cut(s) 203, 601, 677, 731, 758
Hpy8I GTNNAC 3 cut(s) 71, 321, 718
Hpy99I CGWCG 2 cut(s) 267, 336
HpyAV CCTTC 2 cut(s) 636, 878
HpyCH4III ACNGT 4 cut(s) 99, 325, 587, 715
HpyF3I CTNAG 1 cut(s) 150
Hsp92II CATG 6 cut(s) 380, 471, 604, 637, 647, 959
HspAI GCGC 1 cut(s) 383
Kpn2I TCCGGA 1 cut(s) 730
Kzo9I GATC 5 cut(s) 205, 259, 500, 538, 622
LmnI GCTCC 5 cut(s) 108, 328, 380, 733, 733
Lsp1109I GCAGC 4 cut(s) 133, 806, 872, 927
LweI GCATC 4 cut(s) 46, 627, 806, 989
MaeI CTAG 1 cut(s) 741
MalI GATC 5 cut(s) 207, 261, 502, 540, 624
MboI GATC 5 cut(s) 205, 259, 500, 538, 622
MboII GAAGA 1 cut(s) 1015
MfeI CAATTG 1 cut(s) 103
MflI RGATCY 1 cut(s) 538
MhlI GDGCHC 3 cut(s) 286, 720, 788
MluCI AATT 5 cut(s) 103, 112, 580, 616, 753
MlyI GAGTC 1 cut(s) 353
MnlI CCTC 7 cut(s) 26, 123, 273, 342, 475, 529, 597
Mph1103I ATGCAT 1 cut(s) 982
MroI TCCGGA 1 cut(s) 730
MseI TTAA 3 cut(s) 116, 699, 876
MslI CAYNNNNRTG 2 cut(s) 795, 960
MspA1I CMGCKG 1 cut(s) 49
MspI CCGG 3 cut(s) 424, 685, 731
MspR9I CCNGG 1 cut(s) 668
MunI CAATTG 1 cut(s) 103
MvaI CCWGG 1 cut(s) 668
MvnI CGCG 1 cut(s) 416
NdeII GATC 5 cut(s) 205, 259, 500, 538, 622
NlaIII CATG 6 cut(s) 380, 471, 604, 637, 647, 959
NlaIV GGNNCC 1 cut(s) 401
NmeAIII GCCGAG 1 cut(s) 104
NsiI ATGCAT 1 cut(s) 982
NspI RCATGY 1 cut(s) 959
NspV TTCGAA 1 cut(s) 577
PagI TCATGA 1 cut(s) 600
PciI ACATGT 1 cut(s) 955
PfeI GAWTC 2 cut(s) 373, 647
PflFI GACNNNGTC 2 cut(s) 764, 899
PinAI ACCGGT 1 cut(s) 684
PkrI GCNGC 5 cut(s) 148, 316, 821, 862, 917
PleI GAGTC 1 cut(s) 352
PpsI GAGTC 1 cut(s) 352
PscI ACATGT 1 cut(s) 955
Psp6I CCWGG 1 cut(s) 666
PspFI CCCAGC 1 cut(s) 385
PspGI CCWGG 1 cut(s) 666
PspN4I GGNNCC 1 cut(s) 401
PspPI GGNCC 2 cut(s) 321, 400
PstI CTGCAG 2 cut(s) 141, 917
PsuI RGATCY 1 cut(s) 538
PsyI GACNNNGTC 2 cut(s) 764, 899
PvuII CAGCTG 1 cut(s) 49
RsaI GTAC 1 cut(s) 707
RsaNI GTAC 1 cut(s) 706
RseI CAYNNNNRTG 2 cut(s) 795, 960
SaqAI TTAA 3 cut(s) 116, 699, 876
SatI GCNGC 5 cut(s) 147, 315, 820, 861, 916
Sau3AI GATC 5 cut(s) 205, 259, 500, 538, 622
Sau96I GGNCC 2 cut(s) 321, 400
ScaI AGTACT 1 cut(s) 707
SchI GAGTC 1 cut(s) 353
ScrFI CCNGG 1 cut(s) 668
SduI GDGCHC 3 cut(s) 286, 720, 788
SetI ASST 4 cut(s) 51, 746, 844, 920
SfaNI GCATC 4 cut(s) 46, 627, 806, 989
SfcI CTRYAG 2 cut(s) 137, 913
SfuI TTCGAA 1 cut(s) 577
SinI GGWCC 2 cut(s) 321, 400
SmiI ATTTAAAT 1 cut(s) 117
SmiMI CAYNNNNRTG 2 cut(s) 795, 960
Sse9I AATT 5 cut(s) 103, 112, 580, 616, 753
SsiI CCGC 4 cut(s) 314, 352, 370, 941
SspMI CTAG 1 cut(s) 741
StyD4I CCNGG 1 cut(s) 666
SwaI ATTTAAAT 1 cut(s) 117
TaaI ACNGT 4 cut(s) 99, 325, 587, 715
TaqI TCGA 7 cut(s) 208, 262, 303, 347, 358, 577, 757
TasI AATT 5 cut(s) 103, 112, 580, 616, 753
TatI WGTACW 1 cut(s) 705
TauI GCSGC 1 cut(s) 317
TfiI GAWTC 2 cut(s) 373, 647
Tru1I TTAA 3 cut(s) 116, 699, 876
Tru9I TTAA 3 cut(s) 116, 699, 876
TscAI CASTG 3 cut(s) 291, 718, 725
TseI GCWGC 4 cut(s) 146, 819, 860, 915
TspDTI ATGAA 3 cut(s) 609, 639, 867
TspGWI ACGGA 2 cut(s) 45, 392
TspRI CASTG 3 cut(s) 291, 718, 725
Tth111I GACNNNGTC 2 cut(s) 764, 899
VneI GTGCAC 1 cut(s) 716
VpaK11BI GGWCC 2 cut(s) 321, 400
XapI RAATTY 1 cut(s) 753
XceI RCATGY 1 cut(s) 959
XspI CTAG 1 cut(s) 741
ZrmI AGTACT 1 cut(s) 707
Zsp2I ATGCAT 1 cut(s) 982
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.