pycom05g10190

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
13554583 .. 13555890
1308 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g10190.3

Sequence Viewer

Length: 939 bp
ATGCTATCAAAACTCCTGCAACTATTTTTAACATTTCAACATTTTGTTTTCGTTGTTGACAATGGCAAGTTCTCAAAGCTGCCATTTTTTAGAAAGAAGGAAAGAGAGTCGTCATACTACAAGAACCTAAAAAAGTTATTAGAGGATCTCCTTGCTTCTAGTGATGGAGAATCTCATCCTATTCATTGTTACTCTGCGGATGACCTCATCAGGGCAACTAACAACTTCAGTCCTTCTCGCACTGTAAAACAGGGTTCATGTTACGCAATGTTCAGGGGATTTCTGGATGGCCGATCCATTATCGTATCAAAGTACTACATTCAGAACTGGTCAAACGAGGATAGGGATAGGTCTTGCGTTATTCGTGACATTGTCATTTCATTGCAGATGAGCAACCATGATAATGTTTTGAAACTCTTGGGCTGCTGCTTAGAGTTCCCTATACCAGTGCTGGTGCATGAATACGCAGCAAAAGGAGTTTTCAACCCTGATGGAAGTTTAGGTGGGGCTAGTGAAGATCGAATCATACTACCATGGAACATTAGATTGCGTATTGCAAAGCAAGTTGCTAGTGCAGTTTCATATCTCCATACCGCTTTTGCCGGAGCCATCATTCATAGGCATCTGAACCCGAGATGCATGTTCTTGGATGATGACTATGTTCCCAAACTTTACGACTTCTCGCTCTCTATAACCATTCCTCCTCCGGATTCGGATGTTGAAGATGCTGTGCGAGGGATATTTGGGTACCTTGACCCTGTCTACATATGGTCTCGTCGCATTTCCGAAAAAACTGATGTTTACAGCTTTGGTGTTCTTTTACTCGTATTCCTGACGGGACGAAAAGCTGTGGACATTAATCAGGCGGAAGGATATGAATCTGTGATTTCTTATGTTCTTGAATGTGATGGTCAAATCAGGGCGATTGTCGATCCATAA

Protein Analysis

313

Amino Acids

35.47

Weight (kDa)

6.45

Isoelectric Point (pI)

36.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 747
AccB1I GGYRCC 1 cut(s) 747
AccI GTMKAC 1 cut(s) 762
AccIII TCCGGA 1 cut(s) 706
AciI CCGC 3 cut(s) 197, 594, 866
AclWI GGATC 3 cut(s) 153, 288, 926
AcoI YGGCCR 1 cut(s) 289
AcuI CTGAAG 1 cut(s) 211
AfaI GTAC 2 cut(s) 314, 749
AfiI CCNNNNNNNGG 1 cut(s) 211
AgsI TTSAA 5 cut(s) 38, 412, 484, 722, 902
AluBI AGCT 3 cut(s) 79, 807, 848
AluI AGCT 3 cut(s) 79, 807, 848
Alw26I GTCTC 1 cut(s) 777
AlwI GGATC 3 cut(s) 153, 288, 926
Ama87I CYCGRG 1 cut(s) 631
Aor13HI TCCGGA 1 cut(s) 706
AoxI GGCC 1 cut(s) 289
ApeKI GCWGC 4 cut(s) 79, 423, 426, 467
AseI ATTAAT 1 cut(s) 858
Asp718I GGTACC 1 cut(s) 747
AvaI CYCGRG 1 cut(s) 631
BanI GGYRCC 1 cut(s) 747
BbvI GCAGC 4 cut(s) 66, 410, 413, 479
BccI CCATC 5 cut(s) 158, 281, 485, 617, 902
BcoDI GTCTC 1 cut(s) 777
BfaI CTAG 3 cut(s) 159, 510, 570
BisI GCNGC 4 cut(s) 80, 424, 427, 468
BlsI GCNGC 4 cut(s) 81, 425, 428, 469
BmcAI AGTACT 1 cut(s) 314
BmeT110I CYCGRG 1 cut(s) 631
BmiI GGNNCC 2 cut(s) 607, 749
BmsI GCATC 3 cut(s) 626, 631, 715
BsaBI GATNNNNATC 1 cut(s) 877
BsaI GGTCTC 1 cut(s) 777
BsaJI CCNNGG 1 cut(s) 533
BsaWI WCCGGW 1 cut(s) 706
BsaXI ACNNNNNCTCC 2 cut(s) 685, 715
Bsc4I CCNNNNNNNGG 1 cut(s) 211
Bse1I ACTGG 2 cut(s) 332, 446
Bse3DI GCAATG 2 cut(s) 273, 380
Bse8I GATNNNNATC 1 cut(s) 877
BseAI TCCGGA 1 cut(s) 706
BseDI CCNNGG 1 cut(s) 533
BseGI GGATG 5 cut(s) 175, 205, 292, 655, 721
BseJI GATNNNNATC 1 cut(s) 877
BseLI CCNNNNNNNGG 1 cut(s) 211
BseMI GCAATG 2 cut(s) 273, 380
BseNI ACTGG 2 cut(s) 332, 446
BseRI GAGGAG 1 cut(s) 693
BseXI GCAGC 4 cut(s) 66, 410, 413, 479
BsgI GTGCAG 1 cut(s) 594
BshFI GGCC 1 cut(s) 291
BshNI GGYRCC 1 cut(s) 747
BsiHKCI CYCGRG 1 cut(s) 631
BsiSI CCGG 2 cut(s) 603, 707
BslFI GGGAC 1 cut(s) 852
BslI CCNNNNNNNGG 1 cut(s) 211
BsmAI GTCTC 1 cut(s) 777
BsmFI GGGAC 1 cut(s) 852
BsnI GGCC 1 cut(s) 291
Bso31I GGTCTC 1 cut(s) 777
BsoBI CYCGRG 1 cut(s) 631
Bsp13I TCCGGA 1 cut(s) 706
Bsp143I GATC 4 cut(s) 145, 293, 517, 931
Bsp19I CCATGG 1 cut(s) 533
BspACI CCGC 3 cut(s) 197, 594, 866
BspANI GGCC 1 cut(s) 291
BspEI TCCGGA 1 cut(s) 706
BspLI GGNNCC 2 cut(s) 607, 749
BspPI GGATC 3 cut(s) 153, 288, 926
BspT107I GGYRCC 1 cut(s) 747
BspTNI GGTCTC 1 cut(s) 777
BsrDI GCAATG 2 cut(s) 273, 380
BsrI ACTGG 2 cut(s) 332, 446
BssECI CCNNGG 1 cut(s) 533
BssMI GATC 4 cut(s) 145, 293, 517, 931
BssT1I CCWWGG 1 cut(s) 533
Bst4CI ACNGT 1 cut(s) 244
BstDEI CTNAG 1 cut(s) 430
BstDSI CCRYGG 1 cut(s) 533
BstF5I GGATG 5 cut(s) 175, 205, 292, 655, 721
BstKTI GATC 4 cut(s) 148, 296, 520, 934
BstMAI GTCTC 1 cut(s) 777
BstMBI GATC 4 cut(s) 145, 293, 517, 931
BstNSI RCATGY 1 cut(s) 643
BstV1I GCAGC 4 cut(s) 66, 410, 413, 479
BstX2I RGATCY 1 cut(s) 145
BstYI RGATCY 1 cut(s) 145
BsuRI GGCC 1 cut(s) 291
BtgI CCRYGG 1 cut(s) 533
BtsCI GGATG 5 cut(s) 175, 205, 292, 655, 721
BtsIMutI CAGTG 2 cut(s) 240, 453
Csp6I GTAC 2 cut(s) 313, 748
CviAII CATG 5 cut(s) 258, 398, 458, 534, 640
CviJI RGCY 7 cut(s) 79, 291, 423, 509, 608, 807, 848
CviKI_1 RGCY 7 cut(s) 79, 291, 423, 509, 608, 807, 848
CviQI GTAC 2 cut(s) 313, 748
DdeI CTNAG 1 cut(s) 430
DpnI GATC 4 cut(s) 147, 295, 519, 933
DpnII GATC 4 cut(s) 145, 293, 517, 931
EaeI YGGCCR 1 cut(s) 289
EciI GGCGGA 1 cut(s) 881
Eco130I CCWWGG 1 cut(s) 533
Eco31I GGTCTC 1 cut(s) 777
Eco57I CTGAAG 1 cut(s) 211
Eco88I CYCGRG 1 cut(s) 631
EcoT14I CCWWGG 1 cut(s) 533
EcoT22I ATGCAT 1 cut(s) 641
ErhI CCWWGG 1 cut(s) 533
FaeI CATG 5 cut(s) 261, 401, 461, 537, 643
FaqI GGGAC 1 cut(s) 852
FatI CATG 5 cut(s) 257, 397, 457, 533, 639
FauNDI CATATG 1 cut(s) 767
FblI GTMKAC 1 cut(s) 762
Fnu4HI GCNGC 4 cut(s) 80, 424, 427, 468
FokI GGATG 5 cut(s) 162, 212, 299, 662, 728
Fsp4HI GCNGC 4 cut(s) 80, 424, 427, 468
FspBI CTAG 3 cut(s) 159, 510, 570
GluI GCNGC 4 cut(s) 80, 424, 427, 468
HaeIII GGCC 1 cut(s) 291
HapII CCGG 2 cut(s) 603, 707
Hin1II CATG 5 cut(s) 261, 401, 461, 537, 643
HincII GTYRAC 1 cut(s) 58
HindII GTYRAC 1 cut(s) 58
HinfI GANTC 5 cut(s) 107, 170, 522, 710, 878
HpaII CCGG 2 cut(s) 603, 707
Hpy166II GTNNAC 4 cut(s) 58, 763, 802, 853
Hpy188I TCNGA 4 cut(s) 324, 627, 715, 787
Hpy188III TCNNGA 5 cut(s) 284, 365, 707, 832, 899
Hpy8I GTNNAC 4 cut(s) 58, 763, 802, 853
Hpy99I CGWCG 1 cut(s) 780
HpyAV CCTTC 3 cut(s) 91, 243, 863
HpyCH4III ACNGT 1 cut(s) 244
HpyCH4V TGCA 6 cut(s) 19, 385, 457, 557, 575, 639
HpyF3I CTNAG 1 cut(s) 430
Hsp92II CATG 5 cut(s) 261, 401, 461, 537, 643
Kpn2I TCCGGA 1 cut(s) 706
KpnI GGTACC 1 cut(s) 751
Kzo9I GATC 4 cut(s) 145, 293, 517, 931
LmnI GCTCC 1 cut(s) 605
Lsp1109I GCAGC 4 cut(s) 66, 410, 413, 479
LweI GCATC 3 cut(s) 626, 631, 715
MaeI CTAG 3 cut(s) 159, 510, 570
MaeIII GTNAC 3 cut(s) 188, 260, 365
MalI GATC 4 cut(s) 147, 295, 519, 933
MboI GATC 4 cut(s) 145, 293, 517, 931
MboII GAAGA 2 cut(s) 527, 734
MflI RGATCY 1 cut(s) 145
MlyI GAGTC 1 cut(s) 116
MnlI CCTC 6 cut(s) 136, 215, 331, 711, 714, 728
Mph1103I ATGCAT 1 cut(s) 641
MroI TCCGGA 1 cut(s) 706
MseI TTAA 2 cut(s) 29, 858
MslI CAYNNNNRTG 1 cut(s) 402
MspI CCGG 2 cut(s) 603, 707
NcoI CCATGG 1 cut(s) 533
NdeI CATATG 1 cut(s) 767
NdeII GATC 4 cut(s) 145, 293, 517, 931
NlaIII CATG 5 cut(s) 261, 401, 461, 537, 643
NlaIV GGNNCC 2 cut(s) 607, 749
NmuCI GTSAC 1 cut(s) 365
NsiI ATGCAT 1 cut(s) 641
NspI RCATGY 1 cut(s) 643
PfeI GAWTC 4 cut(s) 170, 522, 710, 878
PflFI GACNNNGTC 2 cut(s) 371, 758
PkrI GCNGC 4 cut(s) 81, 425, 428, 469
PleI GAGTC 1 cut(s) 115
PpsI GAGTC 1 cut(s) 115
PshBI ATTAAT 1 cut(s) 858
PspN4I GGNNCC 2 cut(s) 607, 749
PsuI RGATCY 1 cut(s) 145
PsyI GACNNNGTC 2 cut(s) 371, 758
RsaI GTAC 2 cut(s) 314, 749
RsaNI GTAC 2 cut(s) 313, 748
RseI CAYNNNNRTG 1 cut(s) 402
SaqAI TTAA 2 cut(s) 29, 858
SatI GCNGC 4 cut(s) 80, 424, 427, 468
Sau3AI GATC 4 cut(s) 145, 293, 517, 931
ScaI AGTACT 1 cut(s) 314
SchI GAGTC 1 cut(s) 116
SetI ASST 8 cut(s) 81, 129, 207, 353, 505, 753, 809, 850
SfaNI GCATC 3 cut(s) 626, 631, 715
SmiMI CAYNNNNRTG 1 cut(s) 402
SsiI CCGC 3 cut(s) 197, 594, 866
SspMI CTAG 3 cut(s) 159, 510, 570
StyI CCWWGG 1 cut(s) 533
TaaI ACNGT 1 cut(s) 244
TaqI TCGA 2 cut(s) 520, 930
TatI WGTACW 1 cut(s) 312
TfiI GAWTC 4 cut(s) 170, 522, 710, 878
Tru1I TTAA 2 cut(s) 29, 858
Tru9I TTAA 2 cut(s) 29, 858
TscAI CASTG 2 cut(s) 247, 453
TseFI GTSAC 1 cut(s) 365
TseI GCWGC 4 cut(s) 79, 423, 426, 467
Tsp45I GTSAC 1 cut(s) 365
TspDTI ATGAA 7 cut(s) 173, 246, 369, 474, 570, 605, 891
TspRI CASTG 2 cut(s) 247, 453
Tth111I GACNNNGTC 2 cut(s) 371, 758
VspI ATTAAT 1 cut(s) 858
XceI RCATGY 1 cut(s) 643
XmiI GTMKAC 1 cut(s) 762
XspI CTAG 3 cut(s) 159, 510, 570
ZrmI AGTACT 1 cut(s) 314
Zsp2I ATGCAT 1 cut(s) 641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.