Rmu_sc0003605.1_g000049

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003605.1
Physical Location & Seq
Reverse (-)
194010 .. 195045
1036 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003605.1_g000049.1.cds

Sequence Viewer

Length: 894 bp
atggacgaaaggggtagagctttcttcaacaacggaggcatcttattagaggatctcattgcttcttgtgatggaaaatctaatcctattcgcaattactctgcttctgagctcatcagggccaccaacaattttgatccttcctgcatcatacaaaattgtacgcctactgaggctagtcaatttcatcgttttatacatgtttaccatggttacaaagtgttcaaggagttccctataccagctctggtgcatgaatattcaacaaaaggaattgtcacttatcaaggaggtttcggggccaatgagtccttgccctggaaagttaggttgcgtattgcaaagcagcttgcaaatggacttacatatcttcataccgcctttccgaggcctatcattcacagggacctgaaacccagctgcatttttttggatgaggactatgtccccaaactctgcaacttctcactgtccataaccatacctcctaagcaatcgtatgctgaagataacccgaaagggacatttggttatgttgatcctacctacatgaggtctggttacatttcggaaaaaggtgatgtttacagctttggtgttctattgcttgtgttcttgacaggacaagaagctttgattagatatgaagagggaggagagtatcagtcaattattccatatgtgaaatctcatgcttgtgatggccagattgagacaatagtggatcctgaagtccttagagaggccaagggagataaacacacacaacaatacttgcatgatttccttgcactggcattgttatgcaccagtgacagtagtgaagtacggcctgatatgatcgatgtggcgaaagaactcgtacgaattgagaagtgtttattgccttgctag

Protein Analysis

297

Amino Acids

33.5

Weight (kDa)

5.74

Isoelectric Point (pI)

37.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 378
AclWI GGATC 5 cut(s) 60, 131, 533, 719, 732
AcoI YGGCCR 1 cut(s) 703
AcuI CTGAAG 2 cut(s) 525, 750
AfaI GTAC 3 cut(s) 163, 828, 864
AfiI CCNNNNNNNGG 5 cut(s) 318, 387, 552, 742, 793
AflIII ACRYGT 1 cut(s) 199
AgsI TTSAA 3 cut(s) 28, 226, 264
AjnI CCWGG 1 cut(s) 317
AluBI AGCT 7 cut(s) 20, 112, 245, 349, 420, 591, 632
AluI AGCT 7 cut(s) 20, 112, 245, 349, 420, 591, 632
Alw21I GWGCWC 1 cut(s) 114
Alw26I GTCTC 1 cut(s) 707
AlwI GGATC 5 cut(s) 60, 131, 533, 719, 732
AoxI GGCC 6 cut(s) 120, 300, 389, 703, 744, 830
ApeKI GCWGC 2 cut(s) 346, 420
AspS9I GGNCC 3 cut(s) 120, 300, 406
AsuHPI GGTGA 1 cut(s) 590
AvaII GGWCC 1 cut(s) 406
BalI TGGCCA 1 cut(s) 705
BamHI GGATCC 1 cut(s) 724
BanII GRGCYC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 114
BbvI GCAGC 2 cut(s) 358, 407
BccI CCATC 2 cut(s) 65, 695
BceAI ACGGC 1 cut(s) 845
BciT130I CCWGG 1 cut(s) 319
BcoDI GTCTC 1 cut(s) 707
BfaI CTAG 2 cut(s) 177, 892
BisI GCNGC 2 cut(s) 347, 421
BlsI GCNGC 2 cut(s) 348, 422
Bme1390I CCNGG 1 cut(s) 319
Bme18I GGWCC 1 cut(s) 406
BmgT120I GGNCC 3 cut(s) 120, 300, 406
BmiI GGNNCC 3 cut(s) 301, 407, 726
BmrFI CCNGG 1 cut(s) 319
BmsI GCATC 2 cut(s) 48, 156
Bpu10I CCTNAGC 1 cut(s) 489
Bsa29I ATCGAT 1 cut(s) 843
BsaJI CCNNGG 4 cut(s) 208, 317, 386, 747
BsaXI ACNNNNNCTCC 2 cut(s) 469, 499
Bsc4I CCNNNNNNNGG 5 cut(s) 318, 387, 552, 742, 793
Bse1I ACTGG 2 cut(s) 798, 810
Bse3DI GCAATG 1 cut(s) 57
BseBI CCWGG 1 cut(s) 319
BseCI ATCGAT 1 cut(s) 843
BseDI CCNNGG 4 cut(s) 208, 317, 386, 747
BseGI GGATG 1 cut(s) 439
BseLI CCNNNNNNNGG 5 cut(s) 318, 387, 552, 742, 793
BseMI GCAATG 1 cut(s) 57
BseMII CTCAG 2 cut(s) 99, 162
BseNI ACTGG 2 cut(s) 798, 810
BseRI GAGGAG 1 cut(s) 669
BseXI GCAGC 2 cut(s) 358, 407
BseYI CCCAGC 1 cut(s) 416
BshFI GGCC 6 cut(s) 122, 302, 391, 705, 746, 832
BshVI ATCGAT 1 cut(s) 843
BsiHKAI GWGCWC 1 cut(s) 114
BsiWI CGTACG 1 cut(s) 862
BslFI GGGAC 3 cut(s) 419, 431, 535
BslI CCNNNNNNNGG 5 cut(s) 318, 387, 552, 742, 793
BsmAI GTCTC 1 cut(s) 707
BsmFI GGGAC 3 cut(s) 419, 431, 535
BsnI GGCC 6 cut(s) 122, 302, 391, 705, 746, 832
Bsp1286I GDGCHC 1 cut(s) 114
Bsp143I GATC 5 cut(s) 52, 136, 538, 724, 840
Bsp19I CCATGG 1 cut(s) 208
BspACI CCGC 1 cut(s) 378
BspANI GGCC 6 cut(s) 122, 302, 391, 705, 746, 832
BspCNI CTCAG 2 cut(s) 100, 163
BspDI ATCGAT 1 cut(s) 843
BspLI GGNNCC 3 cut(s) 301, 407, 726
BspPI GGATC 5 cut(s) 60, 131, 533, 719, 732
BsrDI GCAATG 1 cut(s) 57
BsrI ACTGG 2 cut(s) 798, 810
BssECI CCNNGG 4 cut(s) 208, 317, 386, 747
BssMI GATC 5 cut(s) 52, 136, 538, 724, 840
BssT1I CCWWGG 2 cut(s) 208, 747
Bst2UI CCWGG 1 cut(s) 319
Bst4CI ACNGT 2 cut(s) 471, 818
Bst6I CTCTTC 1 cut(s) 642
BstC8I GCNNGC 1 cut(s) 351
BstDEI CTNAG 4 cut(s) 108, 171, 489, 737
BstDSI CCRYGG 1 cut(s) 208
BstENI CCTNNNNNAGG 3 cut(s) 385, 550, 740
BstF5I GGATG 1 cut(s) 439
BstKTI GATC 5 cut(s) 55, 139, 541, 727, 843
BstMAI GTCTC 1 cut(s) 707
BstMBI GATC 5 cut(s) 52, 136, 538, 724, 840
BstNI CCWGG 1 cut(s) 319
BstNSI RCATGY 1 cut(s) 203
BstSCI CCNGG 1 cut(s) 317
BstV1I GCAGC 2 cut(s) 358, 407
BstX2I RGATCY 2 cut(s) 52, 724
BstYI RGATCY 2 cut(s) 52, 724
Bsu15I ATCGAT 1 cut(s) 843
BsuRI GGCC 6 cut(s) 122, 302, 391, 705, 746, 832
BsuTUI ATCGAT 1 cut(s) 843
BtgI CCRYGG 1 cut(s) 208
BtsCI GGATG 1 cut(s) 439
BtsIMutI CAGTG 3 cut(s) 467, 791, 817
Cac8I GCNNGC 1 cut(s) 351
Cfr13I GGNCC 3 cut(s) 120, 300, 406
ClaI ATCGAT 1 cut(s) 843
Csp6I GTAC 3 cut(s) 162, 827, 863
CviAII CATG 6 cut(s) 200, 209, 254, 550, 692, 779
CviQI GTAC 3 cut(s) 162, 827, 863
DdeI CTNAG 4 cut(s) 108, 171, 489, 737
DpnI GATC 5 cut(s) 54, 138, 540, 726, 842
DpnII GATC 5 cut(s) 52, 136, 538, 724, 840
EaeI YGGCCR 1 cut(s) 703
Eam1104I CTCTTC 1 cut(s) 642
EarI CTCTTC 1 cut(s) 642
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 2 cut(s) 208, 747
Eco147I AGGCCT 1 cut(s) 391
Eco24I GRGCYC 1 cut(s) 114
Eco47I GGWCC 1 cut(s) 406
Eco53kI GAGCTC 1 cut(s) 112
Eco57I CTGAAG 2 cut(s) 525, 750
EcoICRI GAGCTC 1 cut(s) 112
EcoNI CCTNNNNNAGG 3 cut(s) 385, 550, 740
EcoO109I RGGNCCY 1 cut(s) 406
EcoRII CCWGG 1 cut(s) 317
EcoT14I CCWWGG 2 cut(s) 208, 747
EcoT38I GRGCYC 1 cut(s) 114
ErhI CCWWGG 2 cut(s) 208, 747
FaeI CATG 6 cut(s) 203, 212, 257, 553, 695, 782
FaqI GGGAC 3 cut(s) 419, 431, 535
FatI CATG 6 cut(s) 199, 208, 253, 549, 691, 778
FauNDI CATATG 1 cut(s) 679
Fnu4HI GCNGC 2 cut(s) 347, 421
FokI GGATG 1 cut(s) 446
FriOI GRGCYC 1 cut(s) 114
Fsp4HI GCNGC 2 cut(s) 347, 421
FspBI CTAG 2 cut(s) 177, 892
GluI GCNGC 2 cut(s) 347, 421
GsaI CCCAGC 1 cut(s) 420
HaeIII GGCC 6 cut(s) 122, 302, 391, 705, 746, 832
Hin1II CATG 6 cut(s) 203, 212, 257, 553, 695, 782
HindIII AAGCTT 1 cut(s) 630
HinfI GANTC 1 cut(s) 308
HphI GGTGA 1 cut(s) 590
Hpy166II GTNNAC 2 cut(s) 205, 586
Hpy188I TCNGA 3 cut(s) 109, 387, 571
Hpy188III TCNNGA 2 cut(s) 616, 728
Hpy8I GTNNAC 2 cut(s) 205, 586
HpyAV CCTTC 1 cut(s) 150
HpyCH4III ACNGT 2 cut(s) 471, 818
HpyCH4V TGCA 9 cut(s) 147, 253, 341, 353, 423, 459, 778, 791, 807
HpyF3I CTNAG 4 cut(s) 108, 171, 489, 737
Hsp92II CATG 6 cut(s) 203, 212, 257, 553, 695, 782
Kzo9I GATC 5 cut(s) 52, 136, 538, 724, 840
Lsp1109I GCAGC 2 cut(s) 358, 407
LweI GCATC 2 cut(s) 48, 156
MaeI CTAG 2 cut(s) 177, 892
MaeIII GTNAC 4 cut(s) 212, 277, 560, 812
MalI GATC 5 cut(s) 54, 138, 540, 726, 842
MboI GATC 5 cut(s) 52, 136, 538, 724, 840
MboII GAAGA 4 cut(s) 16, 362, 518, 659
MflI RGATCY 2 cut(s) 52, 724
MhlI GDGCHC 1 cut(s) 114
MlsI TGGCCA 1 cut(s) 705
MluCI AATT 7 cut(s) 94, 130, 157, 182, 273, 669, 867
MluNI TGGCCA 1 cut(s) 705
MlyI GAGTC 1 cut(s) 317
Mox20I TGGCCA 1 cut(s) 705
MscI TGGCCA 1 cut(s) 705
MslI CAYNNNNRTG 2 cut(s) 696, 802
Msp20I TGGCCA 1 cut(s) 705
MspA1I CMGCKG 1 cut(s) 420
MspR9I CCNGG 1 cut(s) 319
MvaI CCWGG 1 cut(s) 319
NcoI CCATGG 1 cut(s) 208
NdeI CATATG 1 cut(s) 679
NdeII GATC 5 cut(s) 52, 136, 538, 724, 840
NlaIII CATG 6 cut(s) 203, 212, 257, 553, 695, 782
NlaIV GGNNCC 3 cut(s) 301, 407, 726
NmuCI GTSAC 2 cut(s) 277, 812
NspI RCATGY 1 cut(s) 203
PceI AGGCCT 1 cut(s) 391
PciI ACATGT 1 cut(s) 199
Pfl23II CGTACG 1 cut(s) 862
PflFI GACNNNGTC 1 cut(s) 443
PkrI GCNGC 2 cut(s) 348, 422
PleI GAGTC 1 cut(s) 316
PpsI GAGTC 1 cut(s) 316
PpuMI RGGWCCY 1 cut(s) 406
PscI ACATGT 1 cut(s) 199
Psp124BI GAGCTC 1 cut(s) 114
Psp5II RGGWCCY 1 cut(s) 406
Psp6I CCWGG 1 cut(s) 317
PspFI CCCAGC 1 cut(s) 416
PspGI CCWGG 1 cut(s) 317
PspLI CGTACG 1 cut(s) 862
PspN4I GGNNCC 3 cut(s) 301, 407, 726
PspPI GGNCC 3 cut(s) 120, 300, 406
PspPPI RGGWCCY 1 cut(s) 406
PsuI RGATCY 2 cut(s) 52, 724
PsyI GACNNNGTC 1 cut(s) 443
PvuII CAGCTG 1 cut(s) 420
RsaI GTAC 3 cut(s) 163, 828, 864
RsaNI GTAC 3 cut(s) 162, 827, 863
RseI CAYNNNNRTG 2 cut(s) 696, 802
SacI GAGCTC 1 cut(s) 114
SatI GCNGC 2 cut(s) 347, 421
Sau3AI GATC 5 cut(s) 52, 136, 538, 724, 840
Sau96I GGNCC 3 cut(s) 120, 300, 406
SchI GAGTC 1 cut(s) 317
ScrFI CCNGG 1 cut(s) 319
SduI GDGCHC 1 cut(s) 114
SfaNI GCATC 2 cut(s) 48, 156
SinI GGWCC 1 cut(s) 406
SmiMI CAYNNNNRTG 2 cut(s) 696, 802
Sse9I AATT 7 cut(s) 94, 130, 157, 182, 273, 669, 867
SseBI AGGCCT 1 cut(s) 391
SsiI CCGC 1 cut(s) 378
SspI AATATT 1 cut(s) 260
SspMI CTAG 2 cut(s) 177, 892
SstI GAGCTC 1 cut(s) 114
StuI AGGCCT 1 cut(s) 391
StyD4I CCNGG 1 cut(s) 317
StyI CCWWGG 2 cut(s) 208, 747
TaaI ACNGT 2 cut(s) 471, 818
TaqI TCGA 1 cut(s) 843
TasI AATT 7 cut(s) 94, 130, 157, 182, 273, 669, 867
TscAI CASTG 3 cut(s) 474, 798, 817
TseFI GTSAC 2 cut(s) 277, 812
TseI GCWGC 2 cut(s) 346, 420
Tsp45I GTSAC 2 cut(s) 277, 812
TspDTI ATGAA 4 cut(s) 176, 270, 362, 660
TspGWI ACGGA 1 cut(s) 48
TspRI CASTG 3 cut(s) 474, 798, 817
Tth111I GACNNNGTC 1 cut(s) 443
VpaK11BI GGWCC 1 cut(s) 406
XagI CCTNNNNNAGG 3 cut(s) 385, 550, 740
XceI RCATGY 1 cut(s) 203
XspI CTAG 2 cut(s) 177, 892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.