pycom05g10130

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
13511439 .. 13512757
1319 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g10130.2

Sequence Viewer

Length: 906 bp
ATGCCATCAAAGCTCCTGCAACTGTTCTCAAAGCTGCCATTTTTTAGAAAGAAGGAAAGAGAGTCGTCATACTACAAGAATCTAAAAAAGTTATTAGAGGATCTCCTTGCTTCTAGTGATGGAGAATCTCATCCTATTCATTGTTACTCTGCGGATGACCTCATCAGGGCAACTAACAACTTCAGTCCTTCTCGCACTGTAAAACAGGGTTCATTTTACGCAATGTTCAGGGGATTTCTAGATGGCCGATACATTATCGTATCAAAGTACTACATTCGGAACTGGTCAAACGAGGATAGGGATAGGTCTCGCGTTATTCGTGACATTGTCATTTCATTGCAGATGAGCAACCATGATAATGTTTTGAAACTCTTGGGCTGCTGCTTAGAGTTCCCTTTACCAGTGCTGGTGTATGAATACGCAGCAAAAGGAGTTCTCAACCCTTATGGAAGTTTAGGTGGGGCTAGTGAAGATCAAATCATACTACCATGGAACATTAGATTGCGTATTGCAAAGCAAGTTGCTAGTGCAGTTTCATATCTCCATACCGCTTTTGCCGGAGCCATCATTCATAGGAATCTGAACCCCAGCTGCCTGTTCTTGGATGATGAATATGTTCCCAAACTTTACGACTTCTCGCTCTCTATAACCATTCCTCCTCCGGATTCGGATGTTGAAGATGATGTGGGAGGGACACTTGGGTACCTTGACCCTGCCTACATGCGGTCTGGTGGCATTTCAGAAAAAACTGATGTTTACAGCTTTGGTGTTCTTTTACTTGTATTCCTGACGGGACGAAAAGCTCTGGAATTTAATCGGGCGGAAGGACATAAATATGTGATTTCTTATGTTCTTGAATGTGATGGATCAAATCAGGGCGATTGTCGATCGATCAAAGATCTTTGA

Protein Analysis

302

Amino Acids

34.02

Weight (kDa)

6.6

Isoelectric Point (pI)

44.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 702
AccB1I GGYRCC 1 cut(s) 702
AccII CGCG 1 cut(s) 312
AccIII TCCGGA 1 cut(s) 661
AciI CCGC 4 cut(s) 152, 549, 724, 821
AclWI GGATC 2 cut(s) 108, 874
AcoI YGGCCR 1 cut(s) 244
AcsI RAATTY 1 cut(s) 809
AcuI CTGAAG 1 cut(s) 166
AfaI GTAC 2 cut(s) 269, 704
AfiI CCNNNNNNNGG 3 cut(s) 166, 601, 723
AgsI TTSAA 3 cut(s) 367, 677, 857
AluBI AGCT 5 cut(s) 13, 34, 591, 762, 803
AluI AGCT 5 cut(s) 13, 34, 591, 762, 803
Alw26I GTCTC 1 cut(s) 312
AlwI GGATC 2 cut(s) 108, 874
Aor13HI TCCGGA 1 cut(s) 661
AoxI GGCC 1 cut(s) 244
ApeKI GCWGC 5 cut(s) 34, 378, 381, 422, 591
ApoI RAATTY 1 cut(s) 809
Asp700I GAANNNNTTC 1 cut(s) 615
Asp718I GGTACC 1 cut(s) 702
BaeI ACNNNNGTAYC 2 cut(s) 686, 719
BanI GGYRCC 1 cut(s) 702
BbvI GCAGC 5 cut(s) 21, 365, 368, 434, 578
BccI CCATC 5 cut(s) 13, 113, 236, 572, 857
BcoDI GTCTC 1 cut(s) 312
BfaI CTAG 4 cut(s) 114, 239, 465, 525
BglII AGATCT 1 cut(s) 898
BisI GCNGC 5 cut(s) 35, 379, 382, 423, 592
BlsI GCNGC 5 cut(s) 36, 380, 383, 424, 593
BmcAI AGTACT 1 cut(s) 269
BmiI GGNNCC 2 cut(s) 562, 704
Bsa29I ATCGAT 1 cut(s) 890
BsaI GGTCTC 1 cut(s) 312
BsaJI CCNNGG 1 cut(s) 488
BsaWI WCCGGW 1 cut(s) 661
BsaXI ACNNNNNCTCC 2 cut(s) 640, 670
Bsc4I CCNNNNNNNGG 3 cut(s) 166, 601, 723
Bse1I ACTGG 2 cut(s) 287, 401
Bse3DI GCAATG 2 cut(s) 228, 335
BseAI TCCGGA 1 cut(s) 661
BseCI ATCGAT 1 cut(s) 890
BseDI CCNNGG 1 cut(s) 488
BseGI GGATG 4 cut(s) 130, 160, 610, 676
BseLI CCNNNNNNNGG 3 cut(s) 166, 601, 723
BseMI GCAATG 2 cut(s) 228, 335
BseNI ACTGG 2 cut(s) 287, 401
BseRI GAGGAG 1 cut(s) 648
BseXI GCAGC 5 cut(s) 21, 365, 368, 434, 578
BseYI CCCAGC 1 cut(s) 587
BsgI GTGCAG 1 cut(s) 549
Bsh1236I CGCG 1 cut(s) 312
Bsh1285I CGRYCG 1 cut(s) 890
BshFI GGCC 1 cut(s) 246
BshNI GGYRCC 1 cut(s) 702
BshVI ATCGAT 1 cut(s) 890
BsiEI CGRYCG 1 cut(s) 890
BsiSI CCGG 2 cut(s) 558, 662
BslFI GGGAC 2 cut(s) 706, 807
BslI CCNNNNNNNGG 3 cut(s) 166, 601, 723
BsmAI GTCTC 1 cut(s) 312
BsmFI GGGAC 2 cut(s) 706, 807
BsnI GGCC 1 cut(s) 246
Bso31I GGTCTC 1 cut(s) 312
Bsp13I TCCGGA 1 cut(s) 661
Bsp143I GATC 6 cut(s) 100, 472, 866, 887, 891, 898
Bsp19I CCATGG 1 cut(s) 488
BspACI CCGC 4 cut(s) 152, 549, 724, 821
BspANI GGCC 1 cut(s) 246
BspDI ATCGAT 1 cut(s) 890
BspEI TCCGGA 1 cut(s) 661
BspFNI CGCG 1 cut(s) 312
BspLI GGNNCC 2 cut(s) 562, 704
BspPI GGATC 2 cut(s) 108, 874
BspT107I GGYRCC 1 cut(s) 702
BspTNI GGTCTC 1 cut(s) 312
BsrDI GCAATG 2 cut(s) 228, 335
BsrI ACTGG 2 cut(s) 287, 401
BssECI CCNNGG 1 cut(s) 488
BssMI GATC 6 cut(s) 100, 472, 866, 887, 891, 898
BssT1I CCWWGG 1 cut(s) 488
Bst4CI ACNGT 2 cut(s) 24, 199
BstDEI CTNAG 1 cut(s) 385
BstDSI CCRYGG 1 cut(s) 488
BstF5I GGATG 4 cut(s) 130, 160, 610, 676
BstFNI CGCG 1 cut(s) 312
BstKTI GATC 6 cut(s) 103, 475, 869, 890, 894, 901
BstMAI GTCTC 1 cut(s) 312
BstMBI GATC 6 cut(s) 100, 472, 866, 887, 891, 898
BstMCI CGRYCG 1 cut(s) 890
BstMWI GCNNNNNNNGC 1 cut(s) 10
BstNSI RCATGY 1 cut(s) 724
BstUI CGCG 1 cut(s) 312
BstV1I GCAGC 5 cut(s) 21, 365, 368, 434, 578
BstX2I RGATCY 2 cut(s) 100, 898
BstYI RGATCY 2 cut(s) 100, 898
Bsu15I ATCGAT 1 cut(s) 890
BsuRI GGCC 1 cut(s) 246
BsuTUI ATCGAT 1 cut(s) 890
BtgI CCRYGG 1 cut(s) 488
BtsCI GGATG 4 cut(s) 130, 160, 610, 676
BtsIMutI CAGTG 2 cut(s) 195, 408
ClaI ATCGAT 1 cut(s) 890
Csp6I GTAC 2 cut(s) 268, 703
CviAII CATG 3 cut(s) 353, 489, 721
CviJI RGCY 9 cut(s) 13, 34, 246, 378, 464, 563, 591, 762, 803
CviKI_1 RGCY 9 cut(s) 13, 34, 246, 378, 464, 563, 591, 762, 803
CviQI GTAC 2 cut(s) 268, 703
DdeI CTNAG 1 cut(s) 385
DpnI GATC 6 cut(s) 102, 474, 868, 889, 893, 900
DpnII GATC 6 cut(s) 100, 472, 866, 887, 891, 898
EaeI YGGCCR 1 cut(s) 244
EciI GGCGGA 1 cut(s) 836
Eco130I CCWWGG 1 cut(s) 488
Eco31I GGTCTC 1 cut(s) 312
Eco57I CTGAAG 1 cut(s) 166
EcoT14I CCWWGG 1 cut(s) 488
ErhI CCWWGG 1 cut(s) 488
FaeI CATG 3 cut(s) 356, 492, 724
FaqI GGGAC 2 cut(s) 706, 807
FatI CATG 3 cut(s) 352, 488, 720
Fnu4HI GCNGC 5 cut(s) 35, 379, 382, 423, 592
FokI GGATG 4 cut(s) 117, 167, 617, 683
Fsp4HI GCNGC 5 cut(s) 35, 379, 382, 423, 592
FspBI CTAG 4 cut(s) 114, 239, 465, 525
GluI GCNGC 5 cut(s) 35, 379, 382, 423, 592
GsaI CCCAGC 1 cut(s) 591
HaeIII GGCC 1 cut(s) 246
HapII CCGG 2 cut(s) 558, 662
Hin1II CATG 3 cut(s) 356, 492, 724
HinfI GANTC 5 cut(s) 62, 79, 125, 577, 665
HpaII CCGG 2 cut(s) 558, 662
Hpy166II GTNNAC 1 cut(s) 757
Hpy188I TCNGA 4 cut(s) 279, 582, 670, 742
Hpy188III TCNNGA 6 cut(s) 239, 320, 662, 787, 806, 854
Hpy8I GTNNAC 1 cut(s) 757
HpyAV CCTTC 3 cut(s) 46, 198, 818
HpyCH4III ACNGT 2 cut(s) 24, 199
HpyCH4V TGCA 4 cut(s) 19, 340, 512, 530
HpyF10VI GCNNNNNNNGC 1 cut(s) 10
HpyF3I CTNAG 1 cut(s) 385
Hsp92II CATG 3 cut(s) 356, 492, 724
Kpn2I TCCGGA 1 cut(s) 661
KpnI GGTACC 1 cut(s) 706
Kzo9I GATC 6 cut(s) 100, 472, 866, 887, 891, 898
LmnI GCTCC 2 cut(s) 18, 560
Lsp1109I GCAGC 5 cut(s) 21, 365, 368, 434, 578
MaeI CTAG 4 cut(s) 114, 239, 465, 525
MaeIII GTNAC 2 cut(s) 143, 320
MalI GATC 6 cut(s) 102, 474, 868, 889, 893, 900
MboI GATC 6 cut(s) 100, 472, 866, 887, 891, 898
MboII GAAGA 2 cut(s) 482, 689
MflI RGATCY 2 cut(s) 100, 898
MluCI AATT 1 cut(s) 809
MlyI GAGTC 1 cut(s) 71
MnlI CCTC 6 cut(s) 91, 170, 286, 666, 669, 683
MroI TCCGGA 1 cut(s) 661
MroXI GAANNNNTTC 1 cut(s) 615
MseI TTAA 1 cut(s) 813
MslI CAYNNNNRTG 2 cut(s) 357, 834
MspA1I CMGCKG 1 cut(s) 591
MspI CCGG 2 cut(s) 558, 662
MvnI CGCG 1 cut(s) 312
MwoI GCNNNNNNNGC 1 cut(s) 10
NcoI CCATGG 1 cut(s) 488
NdeII GATC 6 cut(s) 100, 472, 866, 887, 891, 898
NlaIII CATG 3 cut(s) 356, 492, 724
NlaIV GGNNCC 2 cut(s) 562, 704
NmuCI GTSAC 1 cut(s) 320
NspI RCATGY 1 cut(s) 724
PcsI WCGNNNNNNNCGW 1 cut(s) 316
PdmI GAANNNNTTC 1 cut(s) 615
PfeI GAWTC 4 cut(s) 79, 125, 577, 665
PflFI GACNNNGTC 1 cut(s) 326
PkrI GCNGC 5 cut(s) 36, 380, 383, 424, 593
Ple19I CGATCG 1 cut(s) 890
PleI GAGTC 1 cut(s) 70
PpsI GAGTC 1 cut(s) 70
PspFI CCCAGC 1 cut(s) 587
PspN4I GGNNCC 2 cut(s) 562, 704
PsuI RGATCY 2 cut(s) 100, 898
PsyI GACNNNGTC 1 cut(s) 326
PvuI CGATCG 1 cut(s) 890
PvuII CAGCTG 1 cut(s) 591
RsaI GTAC 2 cut(s) 269, 704
RsaNI GTAC 2 cut(s) 268, 703
RseI CAYNNNNRTG 2 cut(s) 357, 834
SaqAI TTAA 1 cut(s) 813
SatI GCNGC 5 cut(s) 35, 379, 382, 423, 592
Sau3AI GATC 6 cut(s) 100, 472, 866, 887, 891, 898
ScaI AGTACT 1 cut(s) 269
SchI GAGTC 1 cut(s) 71
SetI ASST 9 cut(s) 15, 36, 162, 308, 460, 593, 708, 764, 805
SmiMI CAYNNNNRTG 2 cut(s) 357, 834
Sse9I AATT 1 cut(s) 809
SsiI CCGC 4 cut(s) 152, 549, 724, 821
SspMI CTAG 4 cut(s) 114, 239, 465, 525
StyI CCWWGG 1 cut(s) 488
TaaI ACNGT 2 cut(s) 24, 199
TaqI TCGA 2 cut(s) 886, 890
TasI AATT 1 cut(s) 809
TatI WGTACW 1 cut(s) 267
TfiI GAWTC 4 cut(s) 79, 125, 577, 665
Tru1I TTAA 1 cut(s) 813
Tru9I TTAA 1 cut(s) 813
TscAI CASTG 2 cut(s) 202, 408
TseFI GTSAC 1 cut(s) 320
TseI GCWGC 5 cut(s) 34, 378, 381, 422, 591
Tsp45I GTSAC 1 cut(s) 320
TspDTI ATGAA 7 cut(s) 128, 201, 324, 429, 525, 560, 624
TspRI CASTG 2 cut(s) 202, 408
Tth111I GACNNNGTC 1 cut(s) 326
XapI RAATTY 1 cut(s) 809
XbaI TCTAGA 1 cut(s) 238
XceI RCATGY 1 cut(s) 724
XmnI GAANNNNTTC 1 cut(s) 615
XspI CTAG 4 cut(s) 114, 239, 465, 525
ZrmI AGTACT 1 cut(s) 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.