Rh6BG044500
NAC Family

Inactive serine threonine-protein kinase At1g67470-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
7072723 .. 7077249
4527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG044500.1

Sequence Viewer

Length: 477 bp
ATGTTTGAAGTATTCCAGCTTCTACGAGCCATCGGACAGAAATATAACTTCACAATTGAAGAGGAGATGCCGAAGCCTTCAGACACTGTTGATTGTGCAGGAGAATTCATTGTTGCTCGAGAGATGATGGAGATAATTGAAAATGGTCTGGAAGAGGACTCGTTGATTCCATGTTTGAGAAAGGAGGGAGAACATGCTGATAGATCATTCTTGGATAATGGAAGCAATCTTATTGCTTCTTGTGATGAGAAATCTAATCCTATTCGTCATTACTCTGCTCAAGAACTCATCAGGGCAACCAATAACTTTGATCCCTCTGGCATTATACCGCAGGGTTCATTCTACTATAGAGGTTTTCTAGACAACCGATTAATCATCATTAAGAAGAGAGGGGGGAAGGATGGGCCCTATATGAATTTCAAGAGGGCGAGGGAGGAGGCTGTTCGTGATATTATCATTTCAATGCAGATGAGCTAG

Protein Analysis

158

Amino Acids

18.1

Weight (kDa)

5.04

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 329
AclWI GGATC 1 cut(s) 305
AcsI RAATTY 2 cut(s) 104, 415
AcuI CTGAAG 1 cut(s) 63
AgsI TTSAA 5 cut(s) 8, 59, 140, 421, 462
AluBI AGCT 2 cut(s) 19, 474
AluI AGCT 2 cut(s) 19, 474
AlwI GGATC 1 cut(s) 305
AlwNI CAGNNNCTG 1 cut(s) 86
Ama87I CYCGRG 1 cut(s) 117
AoxI GGCC 1 cut(s) 404
ApaI GGGCCC 1 cut(s) 408
ApoI RAATTY 2 cut(s) 104, 415
AseI ATTAAT 1 cut(s) 371
AspS9I GGNCC 2 cut(s) 404, 405
AvaI CYCGRG 1 cut(s) 117
BaeGI GKGCMC 1 cut(s) 408
BanII GRGCYC 1 cut(s) 408
BarI GAAGNNNNNNTAC 1 cut(s) 35
BccI CCATC 3 cut(s) 38, 121, 395
BfaI CTAG 2 cut(s) 359, 475
BfmI CTRYAG 1 cut(s) 346
BmeT110I CYCGRG 1 cut(s) 117
BmgT120I GGNCC 2 cut(s) 404, 405
BmiI GGNNCC 1 cut(s) 406
BmsI GCATC 1 cut(s) 57
BpuEI CTTGAG 1 cut(s) 264
BseGI GGATG 1 cut(s) 406
BseRI GAGGAG 2 cut(s) 77, 449
BseSI GKGCMC 1 cut(s) 408
BsgI GTGCAG 1 cut(s) 117
BshFI GGCC 1 cut(s) 406
BsiHKCI CYCGRG 1 cut(s) 117
BsnI GGCC 1 cut(s) 406
BsoBI CYCGRG 1 cut(s) 117
Bsp120I GGGCCC 1 cut(s) 404
Bsp1286I GDGCHC 1 cut(s) 408
Bsp143I GATC 2 cut(s) 203, 310
BspACI CCGC 1 cut(s) 329
BspANI GGCC 1 cut(s) 406
BspLI GGNNCC 1 cut(s) 406
BspPI GGATC 1 cut(s) 305
BssMI GATC 2 cut(s) 203, 310
Bst4CI ACNGT 1 cut(s) 88
Bst6I CTCTTC 3 cut(s) 54, 147, 380
BstF5I GGATG 1 cut(s) 406
BstKTI GATC 2 cut(s) 206, 313
BstMBI GATC 2 cut(s) 203, 310
BstNSI RCATGY 1 cut(s) 197
BstSFI CTRYAG 1 cut(s) 346
BstSLI GKGCMC 1 cut(s) 408
BsuRI GGCC 1 cut(s) 406
BtsCI GGATG 1 cut(s) 406
BtsIMutI CAGTG 1 cut(s) 84
CaiI CAGNNNCTG 1 cut(s) 86
Cfr13I GGNCC 2 cut(s) 404, 405
CviAII CATG 2 cut(s) 171, 194
CviJI RGCY 6 cut(s) 19, 29, 76, 406, 440, 474
CviKI_1 RGCY 6 cut(s) 19, 29, 76, 406, 440, 474
DpnI GATC 2 cut(s) 205, 312
DpnII GATC 2 cut(s) 203, 310
Eam1104I CTCTTC 3 cut(s) 54, 147, 380
EarI CTCTTC 3 cut(s) 54, 147, 380
Eco24I GRGCYC 1 cut(s) 408
Eco57I CTGAAG 1 cut(s) 63
Eco88I CYCGRG 1 cut(s) 117
EcoO109I RGGNCCY 1 cut(s) 405
EcoRI GAATTC 1 cut(s) 104
EcoT38I GRGCYC 1 cut(s) 408
FaeI CATG 2 cut(s) 174, 197
FaiI YATR 7 cut(s) 45, 172, 195, 326, 348, 411, 413
FatI CATG 2 cut(s) 170, 193
FokI GGATG 1 cut(s) 413
FriOI GRGCYC 1 cut(s) 408
FspBI CTAG 2 cut(s) 359, 475
HaeIII GGCC 1 cut(s) 406
Hin1II CATG 2 cut(s) 174, 197
HinfI GANTC 2 cut(s) 158, 166
Hpy188I TCNGA 2 cut(s) 35, 82
Hpy188III TCNNGA 6 cut(s) 119, 149, 281, 359, 421, 446
HpyAV CCTTC 2 cut(s) 87, 391
HpyCH4III ACNGT 1 cut(s) 88
HpyCH4V TGCA 2 cut(s) 98, 466
Hsp92II CATG 2 cut(s) 174, 197
Kzo9I GATC 2 cut(s) 203, 310
LpnPI CCDG 6 cut(s) 29, 84, 134, 277, 303, 317
LweI GCATC 1 cut(s) 57
MaeI CTAG 2 cut(s) 359, 475
MalI GATC 2 cut(s) 205, 312
MboI GATC 2 cut(s) 203, 310
MboII GAAGA 3 cut(s) 71, 164, 397
MfeI CAATTG 1 cut(s) 54
MhlI GDGCHC 1 cut(s) 408
MluCI AATT 4 cut(s) 54, 104, 135, 415
MlyI GAGTC 1 cut(s) 152
MseI TTAA 2 cut(s) 371, 381
MslI CAYNNNNRTG 1 cut(s) 461
MunI CAATTG 1 cut(s) 54
NdeII GATC 2 cut(s) 203, 310
NlaIII CATG 2 cut(s) 174, 197
NlaIV GGNNCC 1 cut(s) 406
NspI RCATGY 1 cut(s) 197
PaeR7I CTCGAG 1 cut(s) 117
PfeI GAWTC 1 cut(s) 166
PleI GAGTC 1 cut(s) 152
PpsI GAGTC 1 cut(s) 152
PshBI ATTAAT 1 cut(s) 371
PspN4I GGNNCC 1 cut(s) 406
PspOMI GGGCCC 1 cut(s) 404
PspPI GGNCC 2 cut(s) 404, 405
PstNI CAGNNNCTG 1 cut(s) 86
RseI CAYNNNNRTG 1 cut(s) 461
SaqAI TTAA 2 cut(s) 371, 381
Sau3AI GATC 2 cut(s) 203, 310
Sau96I GGNCC 2 cut(s) 404, 405
SchI GAGTC 1 cut(s) 152
SduI GDGCHC 1 cut(s) 408
SetI ASST 3 cut(s) 21, 355, 476
SfaNI GCATC 1 cut(s) 57
SfcI CTRYAG 1 cut(s) 346
Sfr274I CTCGAG 1 cut(s) 117
SlaI CTCGAG 1 cut(s) 117
SmiMI CAYNNNNRTG 1 cut(s) 461
SmlI CTYRAG 2 cut(s) 117, 279
SmoI CTYRAG 2 cut(s) 117, 279
Sse9I AATT 4 cut(s) 54, 104, 135, 415
SsiI CCGC 1 cut(s) 329
SspMI CTAG 2 cut(s) 359, 475
TaaI ACNGT 1 cut(s) 88
TaqI TCGA 1 cut(s) 118
TasI AATT 4 cut(s) 54, 104, 135, 415
TfiI GAWTC 1 cut(s) 166
Tru1I TTAA 2 cut(s) 371, 381
Tru9I TTAA 2 cut(s) 371, 381
TscAI CASTG 1 cut(s) 91
TspDTI ATGAA 3 cut(s) 97, 327, 428
TspRI CASTG 1 cut(s) 91
VspI ATTAAT 1 cut(s) 371
XapI RAATTY 2 cut(s) 104, 415
XbaI TCTAGA 1 cut(s) 358
XceI RCATGY 1 cut(s) 197
XhoI CTCGAG 1 cut(s) 117
XspI CTAG 2 cut(s) 359, 475
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.