Rh6BG044000

protein serine/threonine kinase activity

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
7053686 .. 7054897
1212 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG044000.1

Sequence Viewer

Length: 411 bp
ATGGCAATTCGAGACATTGTCATTTCAATACAGATGAGCACCCACAAAAATGTTTTGAAACTCTTGGGATGTTGCTTAGAGTTCCCTATACCAGCTCTGGTCTATGAATATGCAGCGAAGGGAGTTCTCAACTTTGAAGGAGGACAGCAAGCCATGTTAAGAAATCAGGCAGGAGAATATGAGCACATAATTCCATATGTGAAATCACATGCTTCTGGTGGCCAAGTTCAAACCATTATGGATCCTAAAATATCTAAGGAGGTAGGGGGAGCTGAGCCAGCACACCAGCAATTGCATGATTTCCTTGCACTGGCATTGTTATGCACTCAAGATAAAAGTGATGAAAGGCCAGATATGATCGATGTGGCCAAAGAACTCATACGAATTGAGAATTTTATCTCAAGTGGCTAG

Protein Analysis

136

Amino Acids

15.01

Weight (kDa)

5.45

Isoelectric Point (pI)

31.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 236, 249
AcoI YGGCCR 2 cut(s) 220, 366
AcsI RAATTY 1 cut(s) 391
AfiI CCNNNNNNNGG 1 cut(s) 310
AgsI TTSAA 4 cut(s) 27, 58, 137, 230
AluBI AGCT 2 cut(s) 95, 272
AluI AGCT 2 cut(s) 95, 272
Alw21I GWGCWC 2 cut(s) 41, 186
Alw26I GTCTC 1 cut(s) 6
AlwI GGATC 2 cut(s) 236, 249
AoxI GGCC 3 cut(s) 220, 347, 366
ApeKI GCWGC 1 cut(s) 113
ApoI RAATTY 1 cut(s) 391
BalI TGGCCA 2 cut(s) 222, 368
BamHI GGATCC 1 cut(s) 241
Bbv12I GWGCWC 2 cut(s) 41, 186
BbvI GCAGC 1 cut(s) 125
BcoDI GTCTC 1 cut(s) 6
BfaI CTAG 1 cut(s) 409
BisI GCNGC 1 cut(s) 114
BlpI GCTNAGC 1 cut(s) 273
BlsI GCNGC 1 cut(s) 115
BmiI GGNNCC 1 cut(s) 243
Bpu1102I GCTNAGC 1 cut(s) 273
BpuEI CTTGAG 2 cut(s) 312, 385
Bsa29I ATCGAT 1 cut(s) 360
Bsc4I CCNNNNNNNGG 1 cut(s) 310
Bse1I ACTGG 1 cut(s) 315
BseCI ATCGAT 1 cut(s) 360
BseGI GGATG 1 cut(s) 74
BseLI CCNNNNNNNGG 1 cut(s) 310
BseMII CTCAG 1 cut(s) 264
BseNI ACTGG 1 cut(s) 315
BseXI GCAGC 1 cut(s) 125
BshFI GGCC 3 cut(s) 222, 349, 368
BshVI ATCGAT 1 cut(s) 360
BsiHKAI GWGCWC 2 cut(s) 41, 186
BslI CCNNNNNNNGG 1 cut(s) 310
BsmAI GTCTC 1 cut(s) 6
BsnI GGCC 3 cut(s) 222, 349, 368
Bsp1286I GDGCHC 2 cut(s) 41, 186
Bsp143I GATC 2 cut(s) 241, 357
Bsp1720I GCTNAGC 1 cut(s) 273
BspANI GGCC 3 cut(s) 222, 349, 368
BspCNI CTCAG 1 cut(s) 265
BspDI ATCGAT 1 cut(s) 360
BspLI GGNNCC 1 cut(s) 243
BspPI GGATC 2 cut(s) 236, 249
BsrI ACTGG 1 cut(s) 315
BssMI GATC 2 cut(s) 241, 357
BstC8I GCNNGC 2 cut(s) 150, 279
BstDEI CTNAG 3 cut(s) 76, 255, 273
BstF5I GGATG 1 cut(s) 74
BstKTI GATC 2 cut(s) 244, 360
BstMAI GTCTC 1 cut(s) 6
BstMBI GATC 2 cut(s) 241, 357
BstMWI GCNNNNNNNGC 1 cut(s) 278
BstNSI RCATGY 1 cut(s) 212
BstV1I GCAGC 1 cut(s) 125
BstX2I RGATCY 1 cut(s) 241
BstYI RGATCY 1 cut(s) 241
Bsu15I ATCGAT 1 cut(s) 360
BsuRI GGCC 3 cut(s) 222, 349, 368
BsuTUI ATCGAT 1 cut(s) 360
BtsCI GGATG 1 cut(s) 74
BtsIMutI CAGTG 1 cut(s) 308
Cac8I GCNNGC 2 cut(s) 150, 279
ClaI ATCGAT 1 cut(s) 360
CviAII CATG 3 cut(s) 154, 209, 296
CviJI RGCY 8 cut(s) 95, 152, 222, 272, 277, 349, 368, 408
CviKI_1 RGCY 8 cut(s) 95, 152, 222, 272, 277, 349, 368, 408
DdeI CTNAG 3 cut(s) 76, 255, 273
DpnI GATC 2 cut(s) 243, 359
DpnII GATC 2 cut(s) 241, 357
EaeI YGGCCR 2 cut(s) 220, 366
FaeI CATG 3 cut(s) 157, 212, 299
FatI CATG 3 cut(s) 153, 208, 295
FauNDI CATATG 1 cut(s) 196
Fnu4HI GCNGC 1 cut(s) 114
FokI GGATG 1 cut(s) 81
Fsp4HI GCNGC 1 cut(s) 114
FspBI CTAG 1 cut(s) 409
GluI GCNGC 1 cut(s) 114
HaeIII GGCC 3 cut(s) 222, 349, 368
Hin1II CATG 3 cut(s) 157, 212, 299
Hpy188III TCNNGA 2 cut(s) 11, 329
HpyAV CCTTC 2 cut(s) 112, 131
HpyCH4V TGCA 4 cut(s) 113, 295, 308, 324
HpyF10VI GCNNNNNNNGC 1 cut(s) 278
HpyF3I CTNAG 3 cut(s) 76, 255, 273
Hsp92II CATG 3 cut(s) 157, 212, 299
Kzo9I GATC 2 cut(s) 241, 357
LmnI GCTCC 1 cut(s) 269
LpnPI CCDG 9 cut(s) 83, 105, 152, 156, 201, 291, 296, 299, 363
Lsp1109I GCAGC 1 cut(s) 125
MaeI CTAG 1 cut(s) 409
MalI GATC 2 cut(s) 243, 359
MboI GATC 2 cut(s) 241, 357
MfeI CAATTG 1 cut(s) 290
MflI RGATCY 1 cut(s) 241
MhlI GDGCHC 2 cut(s) 41, 186
MlsI TGGCCA 2 cut(s) 222, 368
MluCI AATT 5 cut(s) 6, 189, 290, 384, 391
MluNI TGGCCA 2 cut(s) 222, 368
MnlI CCTC 2 cut(s) 134, 253
Mox20I TGGCCA 2 cut(s) 222, 368
MscI TGGCCA 2 cut(s) 222, 368
MseI TTAA 1 cut(s) 158
MslI CAYNNNNRTG 2 cut(s) 48, 319
Msp20I TGGCCA 2 cut(s) 222, 368
MunI CAATTG 1 cut(s) 290
MwoI GCNNNNNNNGC 1 cut(s) 278
NdeI CATATG 1 cut(s) 196
NdeII GATC 2 cut(s) 241, 357
NlaIII CATG 3 cut(s) 157, 212, 299
NlaIV GGNNCC 1 cut(s) 243
NspI RCATGY 1 cut(s) 212
PflFI GACNNNGTC 1 cut(s) 17
PkrI GCNGC 1 cut(s) 115
PspN4I GGNNCC 1 cut(s) 243
PsuI RGATCY 1 cut(s) 241
PsyI GACNNNGTC 1 cut(s) 17
RseI CAYNNNNRTG 2 cut(s) 48, 319
SaqAI TTAA 1 cut(s) 158
SatI GCNGC 1 cut(s) 114
Sau3AI GATC 2 cut(s) 241, 357
SduI GDGCHC 2 cut(s) 41, 186
SetI ASST 3 cut(s) 97, 264, 274
SmiMI CAYNNNNRTG 2 cut(s) 48, 319
SmlI CTYRAG 2 cut(s) 327, 400
SmoI CTYRAG 2 cut(s) 327, 400
Sse9I AATT 5 cut(s) 6, 189, 290, 384, 391
SspMI CTAG 1 cut(s) 409
TaqI TCGA 2 cut(s) 10, 360
TasI AATT 5 cut(s) 6, 189, 290, 384, 391
Tru1I TTAA 1 cut(s) 158
Tru9I TTAA 1 cut(s) 158
TscAI CASTG 1 cut(s) 315
TseI GCWGC 1 cut(s) 113
TspDTI ATGAA 2 cut(s) 120, 357
TspRI CASTG 1 cut(s) 315
Tth111I GACNNNGTC 1 cut(s) 17
XapI RAATTY 1 cut(s) 391
XceI RCATGY 1 cut(s) 212
XspI CTAG 1 cut(s) 409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.