pycom05g10220

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
13573016 .. 13573909
894 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g10220.1

Sequence Viewer

Length: 894 bp
ATGGCAAGTAACAAAAATATATGTAGTTTCATTAATACTTCTTGTGTTACATACGTATGTATATATATTTGTGCCAAGTTCTCAAGGTTGCCATTTTTTTGGAAGAAGAAAAGAAAGTCATCGTACTACAAGAATCTAAAAAAGTTATTAGAGGATCTCTTTGCTTCTAGTGATGGCGAATCTCATCCTATTCATTGTTACTTTGCTGATGACCTCACTAGGGCAACCAACAACTTTCATCCTTCTCGCATTGTAACTTATAGTTCAGGCAACAAAATGTTCGGGGGATTTCTAGATGATCGATCAATTATCGTTGCAAAGTACCACTTTGGGAACTGCCTAAATGAGGATAGGGGCAAGTTTTGGGTTATCCGTGACACTGTCATTTCATTACAGATGAGCCATAATAAGAATGTTTTGAAACTCTTGGGTTGCTGCTTAGAGTTCCTTATACCAGTGCTAGTGCATGAATACGGAGCAAAAGGAGTTTTCAACCCTGATGGAAGTTTAAGAGGGGTTAATGAAGGTCAAATCATAGTACCATGGAACATTAGATTGCATATTGCAAAACAGGTTGCTAGTGTAGTTTCATATCTCCATACCGCCTTTGCCAGACCCATCATTCATAGGAATCTGGACCCCAGCTGCCTGTTCTTGGATGATGACTATGTTCCCAAACTTTACAACTTCTCGCTCTCTATAACCATTCCTATGGAATCGGATGTTAATGATGATGTGACTGGGATATTTGGCTACATTGACCCTGTCTACCTGTATTCTAATCGCATTACAGAAAAAACTGATGTTTATAGCCTTGGGGTGCTTTTACTTGTATTCCTGACTGGACAAGAACCTTGGGGACTTTGGGGGTGGGAAGAAATTGAAATGATTTGA

Protein Analysis

298

Amino Acids

33.99

Weight (kDa)

7.09

Isoelectric Point (pI)

36.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 125 - 287 3.5e-16 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 130 - 286 1.3e-12 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 768
AciI CCGC 1 cut(s) 603
AclWI GGATC 1 cut(s) 162
AfaI GTAC 3 cut(s) 125, 323, 540
AfiI CCNNNNNNNGG 3 cut(s) 220, 346, 655
AgsI TTSAA 3 cut(s) 421, 493, 884
AluBI AGCT 1 cut(s) 645
AluI AGCT 1 cut(s) 645
AlwI GGATC 1 cut(s) 162
ApeKI GCWGC 2 cut(s) 435, 645
AseI ATTAAT 1 cut(s) 33
AspS9I GGNCC 1 cut(s) 637
AvaII GGWCC 1 cut(s) 637
BbvI GCAGC 2 cut(s) 422, 632
BccI CCATC 3 cut(s) 167, 494, 626
BfaI CTAG 5 cut(s) 168, 219, 293, 461, 579
BisI GCNGC 2 cut(s) 436, 646
BlsI GCNGC 2 cut(s) 437, 647
Bme18I GGWCC 1 cut(s) 637
BmgT120I GGNCC 1 cut(s) 637
BmiI GGNNCC 1 cut(s) 639
BmrI ACTGGG 1 cut(s) 750
BmuI ACTGGG 1 cut(s) 750
BpuEI CTTGAG 1 cut(s) 67
Bsa29I ATCGAT 1 cut(s) 301
BsaAI YACGTR 1 cut(s) 55
BsaJI CCNNGG 3 cut(s) 542, 814, 854
Bsc4I CCNNNNNNNGG 3 cut(s) 220, 346, 655
Bse1I ACTGG 3 cut(s) 455, 745, 847
BseCI ATCGAT 1 cut(s) 301
BseDI CCNNGG 3 cut(s) 542, 814, 854
BseGI GGATG 4 cut(s) 184, 238, 664, 727
BseLI CCNNNNNNNGG 3 cut(s) 220, 346, 655
BseNI ACTGG 3 cut(s) 455, 745, 847
BseXI GCAGC 2 cut(s) 422, 632
BseYI CCCAGC 1 cut(s) 641
BshVI ATCGAT 1 cut(s) 301
BslFI GGGAC 1 cut(s) 873
BslI CCNNNNNNNGG 3 cut(s) 220, 346, 655
BsmFI GGGAC 1 cut(s) 873
Bsp143I GATC 3 cut(s) 154, 298, 302
Bsp19I CCATGG 1 cut(s) 542
BspACI CCGC 1 cut(s) 603
BspDI ATCGAT 1 cut(s) 301
BspLI GGNNCC 1 cut(s) 639
BspPI GGATC 1 cut(s) 162
BsrI ACTGG 3 cut(s) 455, 745, 847
BssECI CCNNGG 3 cut(s) 542, 814, 854
BssMI GATC 3 cut(s) 154, 298, 302
BssT1I CCWWGG 3 cut(s) 542, 814, 854
Bst4CI ACNGT 1 cut(s) 382
BstBAI YACGTR 1 cut(s) 55
BstDEI CTNAG 1 cut(s) 439
BstDSI CCRYGG 1 cut(s) 542
BstENI CCTNNNNNAGG 1 cut(s) 344
BstF5I GGATG 4 cut(s) 184, 238, 664, 727
BstKTI GATC 3 cut(s) 157, 301, 305
BstMBI GATC 3 cut(s) 154, 298, 302
BstSNI TACGTA 1 cut(s) 55
BstV1I GCAGC 2 cut(s) 422, 632
BstX2I RGATCY 1 cut(s) 154
BstXI CCANNNNNNTGG 2 cut(s) 99, 712
BstYI RGATCY 1 cut(s) 154
Bsu15I ATCGAT 1 cut(s) 301
BsuTUI ATCGAT 1 cut(s) 301
BtgI CCRYGG 1 cut(s) 542
BtsCI GGATG 4 cut(s) 184, 238, 664, 727
BtsIMutI CAGTG 2 cut(s) 378, 462
Cfr13I GGNCC 1 cut(s) 637
ClaI ATCGAT 1 cut(s) 301
Csp6I GTAC 3 cut(s) 124, 322, 539
CviAII CATG 2 cut(s) 467, 543
CviJI RGCY 4 cut(s) 402, 645, 753, 813
CviKI_1 RGCY 4 cut(s) 402, 645, 753, 813
CviQI GTAC 3 cut(s) 124, 322, 539
DdeI CTNAG 1 cut(s) 439
DpnI GATC 3 cut(s) 156, 300, 304
DpnII GATC 3 cut(s) 154, 298, 302
Eco105I TACGTA 1 cut(s) 55
Eco130I CCWWGG 3 cut(s) 542, 814, 854
Eco47I GGWCC 1 cut(s) 637
EcoNI CCTNNNNNAGG 1 cut(s) 344
EcoT14I CCWWGG 3 cut(s) 542, 814, 854
ErhI CCWWGG 3 cut(s) 542, 814, 854
FaeI CATG 2 cut(s) 470, 546
FalI AAGNNNNNCTT 2 cut(s) 311, 343
FaqI GGGAC 1 cut(s) 873
FatI CATG 2 cut(s) 466, 542
FblI GTMKAC 1 cut(s) 768
Fnu4HI GCNGC 2 cut(s) 436, 646
FokI GGATG 4 cut(s) 171, 225, 671, 734
Fsp4HI GCNGC 2 cut(s) 436, 646
FspBI CTAG 5 cut(s) 168, 219, 293, 461, 579
GluI GCNGC 2 cut(s) 436, 646
GsaI CCCAGC 1 cut(s) 645
Hin1II CATG 2 cut(s) 470, 546
HinfI GANTC 4 cut(s) 133, 179, 631, 716
Hpy166II GTNNAC 1 cut(s) 769
Hpy188I TCNGA 1 cut(s) 721
Hpy188III TCNNGA 3 cut(s) 293, 635, 838
Hpy8I GTNNAC 1 cut(s) 769
HpyAV CCTTC 2 cut(s) 252, 518
HpyCH4III ACNGT 1 cut(s) 382
HpyCH4IV ACGT 1 cut(s) 54
HpyCH4V TGCA 4 cut(s) 317, 466, 559, 566
HpyF3I CTNAG 1 cut(s) 439
HpySE526I ACGT 1 cut(s) 54
Hsp92II CATG 2 cut(s) 470, 546
Kzo9I GATC 3 cut(s) 154, 298, 302
LmnI GCTCC 1 cut(s) 476
Lsp1109I GCAGC 2 cut(s) 422, 632
MaeI CTAG 5 cut(s) 168, 219, 293, 461, 579
MaeII ACGT 1 cut(s) 54
MaeIII GTNAC 6 cut(s) 8, 46, 197, 253, 374, 736
MalI GATC 3 cut(s) 156, 300, 304
MboI GATC 3 cut(s) 154, 298, 302
MboII GAAGA 3 cut(s) 115, 118, 887
MflI RGATCY 1 cut(s) 154
MluCI AATT 2 cut(s) 306, 879
MnlI CCTC 4 cut(s) 145, 224, 340, 506
MseI TTAA 4 cut(s) 33, 509, 519, 726
MslI CAYNNNNRTG 2 cut(s) 55, 710
MspA1I CMGCKG 1 cut(s) 645
NcoI CCATGG 1 cut(s) 542
NdeII GATC 3 cut(s) 154, 298, 302
NlaIII CATG 2 cut(s) 470, 546
NlaIV GGNNCC 1 cut(s) 639
NmuCI GTSAC 2 cut(s) 374, 736
PfeI GAWTC 4 cut(s) 133, 179, 631, 716
PflFI GACNNNGTC 2 cut(s) 380, 764
PkrI GCNGC 2 cut(s) 437, 647
Ppu21I YACGTR 1 cut(s) 55
PshBI ATTAAT 1 cut(s) 33
PspFI CCCAGC 1 cut(s) 641
PspN4I GGNNCC 1 cut(s) 639
PspPI GGNCC 1 cut(s) 637
PsuI RGATCY 1 cut(s) 154
PsyI GACNNNGTC 2 cut(s) 380, 764
PvuII CAGCTG 1 cut(s) 645
RsaI GTAC 3 cut(s) 125, 323, 540
RsaNI GTAC 3 cut(s) 124, 322, 539
RseI CAYNNNNRTG 2 cut(s) 55, 710
SaqAI TTAA 4 cut(s) 33, 509, 519, 726
SatI GCNGC 2 cut(s) 436, 646
Sau3AI GATC 3 cut(s) 154, 298, 302
Sau96I GGNCC 1 cut(s) 637
SetI ASST 8 cut(s) 57, 89, 216, 529, 576, 647, 774, 856
SinI GGWCC 1 cut(s) 637
SmiMI CAYNNNNRTG 2 cut(s) 55, 710
SmlI CTYRAG 1 cut(s) 82
SmoI CTYRAG 1 cut(s) 82
SnaBI TACGTA 1 cut(s) 55
Sse9I AATT 2 cut(s) 306, 879
SsiI CCGC 1 cut(s) 603
SspMI CTAG 5 cut(s) 168, 219, 293, 461, 579
StyI CCWWGG 3 cut(s) 542, 814, 854
TaaI ACNGT 1 cut(s) 382
TaiI ACGT 1 cut(s) 57
TaqI TCGA 1 cut(s) 301
TasI AATT 2 cut(s) 306, 879
TfiI GAWTC 4 cut(s) 133, 179, 631, 716
Tru1I TTAA 4 cut(s) 33, 509, 519, 726
Tru9I TTAA 4 cut(s) 33, 509, 519, 726
TscAI CASTG 2 cut(s) 385, 462
TseFI GTSAC 2 cut(s) 374, 736
TseI GCWGC 2 cut(s) 435, 645
Tsp45I GTSAC 2 cut(s) 374, 736
TspDTI ATGAA 8 cut(s) 19, 182, 227, 378, 483, 537, 579, 614
TspGWI ACGGA 2 cut(s) 362, 489
TspRI CASTG 2 cut(s) 385, 462
Tth111I GACNNNGTC 2 cut(s) 380, 764
VpaK11BI GGWCC 1 cut(s) 637
VspI ATTAAT 1 cut(s) 33
XagI CCTNNNNNAGG 1 cut(s) 344
XbaI TCTAGA 1 cut(s) 292
XmiI GTMKAC 1 cut(s) 768
XspI CTAG 5 cut(s) 168, 219, 293, 461, 579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.