RLG00000015142

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
62246400 .. 62248236
1837 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015142

Sequence Viewer

Length: 930 bp
ATGCCATCTAAAGTCTTGTACTCGTTGCTTCCATGTTTGACAAAGAAGGAAAAAGATGCCAATGGATCATATTTGCTTAATGGAAGCATCTTATTAGAAGATCTCATTGCCTCTAGTGATGGAAAATTAACTAATCCTATTCGCCACTACACAGCTGATGAGCTCATCAGGGCAACCAATAACTTTCATTCTTCTTGCCTTGTACTAGAGAATGCATTATACAATATATTCACCGGATTTTTAGACAACCGATTAGTTATCATAAAGAAGGAAGGGCGGAGGGATGACTCCTACTGCAATTTCGACCAAGCCAAGAATGAGGTCATTCGTGACATTATAATATCAATGCAGATGAGCACTCATAAGAATGTTTTGAAATTGTTGGGCTGCTGCTTAGAGTTTCCCATACCAGCTCTAGTGCTTGAACATGCAGGCAAAGGAGTTCTCAATGCTGTAGGAGGTTTGGGGGTTAATGACTCCTTAAACTGGAAAACTAGATTGCGTGTTGCAAAGCAGCTTGCTAATGCTATTGCATATCTTCATACAGCCTTCCCCAGACCCATCATTCATAGGAACCTAAAACACAGCTGTATTTTTTTGGACGATGAGTTTGTTCCCAAAATCTCTGATTTCTCTGACTCCATAACCATTCCTCCTGAGCAATCACATGTTGAAGATCTTGTGAAAGGGACATTTGGGTACCTTGACCCTGCGTATAGGAAGTCTGGTTGCATTACAGAGCAGACTGATGTTTATAGCTTTGGTGTCATTTTACTTGTTTTCTTGACTGGACGAAATGCTTCGAAACAAAATCAAGCTGCAGAAAAGTGGGAGTCCCTTGTGTCATTTGTAAAATTACATGCTTGTGATGACCAGTTTCAGATGATTACAAATGATGTGTACCTCCTAAGTCCCAATCAACTTCATTAA

Protein Analysis

310

Amino Acids

34.66

Weight (kDa)

6.55

Isoelectric Point (pI)

33.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 102 - 280 2.3e-20 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 103 - 280 6e-20 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 338
Acc65I GGTACC 1 cut(s) 699
AccB1I GGYRCC 1 cut(s) 699
AciI CCGC 1 cut(s) 277
AclWI GGATC 1 cut(s) 73
AfaI GTAC 4 cut(s) 20, 204, 701, 902
AfiI CCNNNNNNNGG 1 cut(s) 486
AflIII ACRYGT 1 cut(s) 667
AgsI TTSAA 3 cut(s) 376, 425, 674
AluBI AGCT 7 cut(s) 155, 163, 413, 517, 588, 759, 818
AluI AGCT 7 cut(s) 155, 163, 413, 517, 588, 759, 818
Alw21I GWGCWC 2 cut(s) 165, 359
AlwI GGATC 1 cut(s) 73
ApeKI GCWGC 4 cut(s) 387, 390, 514, 818
ArsI GACNNNNNNTTYG 2 cut(s) 593, 625
Asp700I GAANNNNTTC 1 cut(s) 799
Asp718I GGTACC 1 cut(s) 699
AsuHPI GGTGA 1 cut(s) 223
AsuII TTCGAA 1 cut(s) 803
BanI GGYRCC 1 cut(s) 699
BanII GRGCYC 1 cut(s) 165
Bbv12I GWGCWC 2 cut(s) 165, 359
BbvI GCAGC 4 cut(s) 374, 377, 526, 805
BccI CCATC 3 cut(s) 13, 113, 569
BfaI CTAG 4 cut(s) 114, 206, 416, 495
BfmI CTRYAG 2 cut(s) 453, 819
BglII AGATCT 2 cut(s) 100, 676
BisI GCNGC 4 cut(s) 388, 391, 515, 819
BlsI GCNGC 4 cut(s) 389, 392, 516, 820
BmiI GGNNCC 2 cut(s) 575, 701
BmsI GCATC 2 cut(s) 46, 96
Bpu10I CCTNAGC 1 cut(s) 657
Bpu14I TTCGAA 1 cut(s) 803
BsaWI WCCGGW 1 cut(s) 233
BsaXI ACNNNNNCTCC 2 cut(s) 637, 667
Bsc4I CCNNNNNNNGG 1 cut(s) 486
Bse1I ACTGG 3 cut(s) 491, 793, 874
Bse3DI GCAATG 1 cut(s) 105
BseGI GGATG 1 cut(s) 289
BseLI CCNNNNNNNGG 1 cut(s) 486
BseMI GCAATG 1 cut(s) 105
BseMII CTCAG 1 cut(s) 648
BseNI ACTGG 3 cut(s) 491, 793, 874
BseXI GCAGC 4 cut(s) 374, 377, 526, 805
BshNI GGYRCC 1 cut(s) 699
BsiHKAI GWGCWC 2 cut(s) 165, 359
BsiSI CCGG 1 cut(s) 234
BslFI GGGAC 3 cut(s) 703, 820, 897
BslI CCNNNNNNNGG 1 cut(s) 486
BsmFI GGGAC 3 cut(s) 703, 820, 897
BsmI GAATGC 1 cut(s) 217
Bsp119I TTCGAA 1 cut(s) 803
Bsp1286I GDGCHC 2 cut(s) 165, 359
Bsp143I GATC 3 cut(s) 65, 100, 676
BspACI CCGC 1 cut(s) 277
BspCNI CTCAG 1 cut(s) 649
BspLI GGNNCC 2 cut(s) 575, 701
BspMAI CTGCAG 1 cut(s) 823
BspPI GGATC 1 cut(s) 73
BspT104I TTCGAA 1 cut(s) 803
BspT107I GGYRCC 1 cut(s) 699
BsrDI GCAATG 1 cut(s) 105
BsrI ACTGG 3 cut(s) 491, 793, 874
BssMI GATC 3 cut(s) 65, 100, 676
BstBI TTCGAA 1 cut(s) 803
BstC8I GCNNGC 2 cut(s) 433, 519
BstDEI CTNAG 3 cut(s) 394, 657, 908
BstF5I GGATG 1 cut(s) 289
BstKTI GATC 3 cut(s) 68, 103, 679
BstMBI GATC 3 cut(s) 65, 100, 676
BstNSI RCATGY 3 cut(s) 431, 671, 863
BstSFI CTRYAG 2 cut(s) 453, 819
BstV1I GCAGC 4 cut(s) 374, 377, 526, 805
BstX2I RGATCY 2 cut(s) 100, 676
BstYI RGATCY 2 cut(s) 100, 676
BtsCI GGATG 1 cut(s) 289
Cac8I GCNNGC 2 cut(s) 433, 519
Csp6I GTAC 4 cut(s) 19, 203, 700, 901
CviAII CATG 4 cut(s) 33, 428, 668, 860
CviQI GTAC 4 cut(s) 19, 203, 700, 901
DdeI CTNAG 3 cut(s) 394, 657, 908
DpnI GATC 3 cut(s) 67, 102, 678
DpnII GATC 3 cut(s) 65, 100, 676
EciI GGCGGA 1 cut(s) 292
Ecl136II GAGCTC 1 cut(s) 163
Eco24I GRGCYC 1 cut(s) 165
Eco53kI GAGCTC 1 cut(s) 163
EcoICRI GAGCTC 1 cut(s) 163
EcoT22I ATGCAT 1 cut(s) 217
EcoT38I GRGCYC 1 cut(s) 165
FaeI CATG 4 cut(s) 36, 431, 671, 863
FaqI GGGAC 3 cut(s) 703, 820, 897
FatI CATG 4 cut(s) 32, 427, 667, 859
Fnu4HI GCNGC 4 cut(s) 388, 391, 515, 819
FokI GGATG 1 cut(s) 296
FriOI GRGCYC 1 cut(s) 165
Fsp4HI GCNGC 4 cut(s) 388, 391, 515, 819
FspBI CTAG 4 cut(s) 114, 206, 416, 495
GluI GCNGC 4 cut(s) 388, 391, 515, 819
HapII CCGG 1 cut(s) 234
Hin1II CATG 4 cut(s) 36, 431, 671, 863
HinfI GANTC 4 cut(s) 287, 476, 638, 833
HpaII CCGG 1 cut(s) 234
HphI GGTGA 1 cut(s) 223
Hpy166II GTNNAC 1 cut(s) 901
Hpy188I TCNGA 3 cut(s) 628, 637, 882
Hpy188III TCNNGA 3 cut(s) 329, 656, 784
Hpy8I GTNNAC 1 cut(s) 901
HpyAV CCTTC 4 cut(s) 40, 262, 266, 559
HpyCH4V TGCA 8 cut(s) 215, 297, 349, 431, 509, 533, 732, 821
HpyF3I CTNAG 3 cut(s) 394, 657, 908
Hsp92II CATG 4 cut(s) 36, 431, 671, 863
KpnI GGTACC 1 cut(s) 703
Kzo9I GATC 3 cut(s) 65, 100, 676
Lsp1109I GCAGC 4 cut(s) 374, 377, 526, 805
LweI GCATC 2 cut(s) 46, 96
MaeI CTAG 4 cut(s) 114, 206, 416, 495
MaeIII GTNAC 1 cut(s) 329
MalI GATC 3 cut(s) 67, 102, 678
MboI GATC 3 cut(s) 65, 100, 676
MboII GAAGA 4 cut(s) 110, 183, 530, 686
MflI RGATCY 2 cut(s) 100, 676
MhlI GDGCHC 2 cut(s) 165, 359
MluCI AATT 4 cut(s) 125, 298, 377, 854
MlyI GAGTC 4 cut(s) 281, 470, 632, 842
MnlI CCTC 6 cut(s) 121, 273, 313, 452, 663, 914
Mph1103I ATGCAT 1 cut(s) 217
MroXI GAANNNNTTC 1 cut(s) 799
MseI TTAA 5 cut(s) 78, 128, 471, 482, 928
MslI CAYNNNNRTG 2 cut(s) 366, 864
MspA1I CMGCKG 2 cut(s) 155, 588
MspI CCGG 1 cut(s) 234
Mva1269I GAATGC 1 cut(s) 217
NdeII GATC 3 cut(s) 65, 100, 676
NlaIII CATG 4 cut(s) 36, 431, 671, 863
NlaIV GGNNCC 2 cut(s) 575, 701
NmuCI GTSAC 1 cut(s) 329
NsiI ATGCAT 1 cut(s) 217
NspI RCATGY 3 cut(s) 431, 671, 863
NspV TTCGAA 1 cut(s) 803
PciI ACATGT 1 cut(s) 667
PctI GAATGC 1 cut(s) 217
PdmI GAANNNNTTC 1 cut(s) 799
PkrI GCNGC 4 cut(s) 389, 392, 516, 820
PleI GAGTC 4 cut(s) 281, 470, 632, 841
PpsI GAGTC 4 cut(s) 281, 470, 632, 841
PscI ACATGT 1 cut(s) 667
PsiI TTATAA 1 cut(s) 338
Psp124BI GAGCTC 1 cut(s) 165
PspN4I GGNNCC 2 cut(s) 575, 701
PstI CTGCAG 1 cut(s) 823
PsuI RGATCY 2 cut(s) 100, 676
PvuII CAGCTG 2 cut(s) 155, 588
RsaI GTAC 4 cut(s) 20, 204, 701, 902
RsaNI GTAC 4 cut(s) 19, 203, 700, 901
RseI CAYNNNNRTG 2 cut(s) 366, 864
SacI GAGCTC 1 cut(s) 165
SaqAI TTAA 5 cut(s) 78, 128, 471, 482, 928
SatI GCNGC 4 cut(s) 388, 391, 515, 819
Sau3AI GATC 3 cut(s) 65, 100, 676
SchI GAGTC 4 cut(s) 281, 470, 632, 842
SduI GDGCHC 2 cut(s) 165, 359
SfaNI GCATC 2 cut(s) 46, 96
SfcI CTRYAG 2 cut(s) 453, 819
SfuI TTCGAA 1 cut(s) 803
SmiMI CAYNNNNRTG 2 cut(s) 366, 864
Sse9I AATT 4 cut(s) 125, 298, 377, 854
SsiI CCGC 1 cut(s) 277
SspMI CTAG 4 cut(s) 114, 206, 416, 495
SstI GAGCTC 1 cut(s) 165
TaqI TCGA 2 cut(s) 303, 803
TasI AATT 4 cut(s) 125, 298, 377, 854
TatI WGTACW 2 cut(s) 18, 202
Tru1I TTAA 5 cut(s) 78, 128, 471, 482, 928
Tru9I TTAA 5 cut(s) 78, 128, 471, 482, 928
TseFI GTSAC 1 cut(s) 329
TseI GCWGC 4 cut(s) 387, 390, 514, 818
Tsp45I GTSAC 1 cut(s) 329
TspDTI ATGAA 4 cut(s) 176, 530, 557, 914
XceI RCATGY 3 cut(s) 431, 671, 863
XmnI GAANNNNTTC 1 cut(s) 799
XspI CTAG 4 cut(s) 114, 206, 416, 495
Zsp2I ATGCAT 1 cut(s) 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.