pycom10g09470
NAC Family

Inactive serine threonine-protein kinase At1g67470-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
12552738 .. 12553872
1135 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g09470.2

Sequence Viewer

Length: 1035 bp
ATGCTGTCCAAAGTCTTTTTCTCCTTGTGTCCAAGCGTACGAAGGGTGGAAAGAGAGAGCTCAGTCTTGAAAAATGGAAGCATGTTATTGGACGATCTTATTGCTTCGTGTGATGGAGAATCTAATCCTATTCGCACATACTCTGCTGATGAGCTTGTCAAGGCAACCGCCAATTTTAATCCTTCTTGCCGTATAAGTGTGGATGGATTCTTCGAAGTGTTCAGAGGTTTCCTAGATGACCGCTTAGTTCTCATTAAGAAGTACTCCCAAGGGAGATGGCATAGTGAGGCTGAAACTACGTCCATGGCCATTCGTGATATTATCATATCGATGCAGATGAGTACACATAAGAACGCTTTGAAACTCTTGGGCTGCTGCTTAGAGTTCTCTATACCAGCTCTGGTGCTTGAATACGCAGCAAAAGGAGTTCTTAACCAACATGGCGGTTTAGGGTTTTCTGGATCATTACCATGGAAAACTAGAATGCTAATTGCAAAGAAAGTTGCAAATGCACTTGCATATCTCCATACTGCCTTTCCCAGGCCAATCATTCATCGGGATTTAAATTCCAGCTGTATTTTCTTGGGCCATGATTATGTTCCCAAACTCACCAACTTCTCACTCTCCATTTCCATTCCTCCTATGCAGTCTCATGTTGAAGATGATCTGAAAGGGACATGTGGGTACCTTGATCCTTCTTACATTATGTCTGGTTGCATTACAGAAAAAAGTGATGTTTATAGCTTTGGTGTGCATTTACTTGTATTCTTAACGGGACAAAAAGCCCAAGATAAATATGACACAATAGAATACCAATCGATTATTGCATATGTGAAACGACATGTTAGTGAAATCGGGCAGATTCAGACAATTGTGGACCCTAAAATCAAAGAGGATGTAGGGAGAGATGAGAAAGTGCAGCGGCAGTTGCAAGATTTCCTACAACTGGCATTGTCATGCACTCAAGAAGAAAGTGAAAGAAGGCCATATATGACAGACGTGGCTAGAGAACTCGTTCGAATTGACAAGATATGA

Protein Analysis

345

Amino Acids

38.75

Weight (kDa)

6.75

Isoelectric Point (pI)

40.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 684
AccB1I GGYRCC 1 cut(s) 684
AciI CCGC 4 cut(s) 168, 241, 444, 922
AclWI GGATC 2 cut(s) 469, 686
AcoI YGGCCR 1 cut(s) 306
AcsI RAATTY 1 cut(s) 565
AfaI GTAC 4 cut(s) 39, 263, 343, 686
AfiI CCNNNNNNNGG 2 cut(s) 540, 946
AflIII ACRYGT 2 cut(s) 677, 841
AgsI TTSAA 4 cut(s) 70, 361, 410, 659
AjiI CACGTC 1 cut(s) 1000
AjnI CCWGG 1 cut(s) 539
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AluBI AGCT 5 cut(s) 60, 154, 398, 573, 744
AluI AGCT 5 cut(s) 60, 154, 398, 573, 744
Alw21I GWGCWC 1 cut(s) 62
Alw26I GTCTC 1 cut(s) 654
AlwI GGATC 2 cut(s) 469, 686
AoxI GGCC 4 cut(s) 306, 542, 586, 983
ApeKI GCWGC 4 cut(s) 372, 375, 416, 919
ApoI RAATTY 1 cut(s) 565
Asp700I GAANNNNTTC 1 cut(s) 1014
Asp718I GGTACC 1 cut(s) 684
AspS9I GGNCC 2 cut(s) 586, 877
AsuHPI GGTGA 1 cut(s) 601
AsuII TTCGAA 2 cut(s) 213, 1018
AvaII GGWCC 1 cut(s) 877
BalI TGGCCA 1 cut(s) 308
BanI GGYRCC 1 cut(s) 684
BanII GRGCYC 1 cut(s) 62
Bbv12I GWGCWC 1 cut(s) 62
BbvI GCAGC 4 cut(s) 359, 362, 428, 931
BccI CCATC 3 cut(s) 107, 197, 270
BceAI ACGGC 1 cut(s) 174
BcgI CGANNNNNNTGC 2 cut(s) 83, 117
BciT130I CCWGG 1 cut(s) 541
BcoDI GTCTC 1 cut(s) 654
BfaI CTAG 3 cut(s) 233, 480, 1005
BisI GCNGC 5 cut(s) 373, 376, 417, 920, 923
BlsI GCNGC 5 cut(s) 374, 377, 418, 921, 924
BmcAI AGTACT 1 cut(s) 263
Bme1390I CCNGG 1 cut(s) 541
Bme18I GGWCC 1 cut(s) 877
BmgBI CACGTC 1 cut(s) 1000
BmgT120I GGNCC 2 cut(s) 586, 877
BmiI GGNNCC 2 cut(s) 686, 879
BmrFI CCNGG 1 cut(s) 541
BmsI GCATC 1 cut(s) 321
Bpu14I TTCGAA 2 cut(s) 213, 1018
BpuEI CTTGAG 1 cut(s) 948
Bsa29I ATCGAT 2 cut(s) 329, 818
BsaJI CCNNGG 4 cut(s) 268, 303, 470, 539
Bsc4I CCNNNNNNNGG 2 cut(s) 540, 946
Bse1I ACTGG 1 cut(s) 951
BseBI CCWGG 1 cut(s) 541
BseCI ATCGAT 2 cut(s) 329, 818
BseDI CCNNGG 4 cut(s) 268, 303, 470, 539
BseGI GGATG 2 cut(s) 208, 901
BseLI CCNNNNNNNGG 2 cut(s) 540, 946
BseMII CTCAG 1 cut(s) 75
BseNI ACTGG 1 cut(s) 951
BseXI GCAGC 4 cut(s) 359, 362, 428, 931
BsgI GTGCAG 1 cut(s) 938
BshFI GGCC 4 cut(s) 308, 544, 588, 985
BshNI GGYRCC 1 cut(s) 684
BshVI ATCGAT 2 cut(s) 329, 818
BsiHKAI GWGCWC 1 cut(s) 62
BsiWI CGTACG 1 cut(s) 37
BslFI GGGAC 2 cut(s) 688, 789
BslI CCNNNNNNNGG 2 cut(s) 540, 946
BsmAI GTCTC 1 cut(s) 654
BsmFI GGGAC 2 cut(s) 688, 789
BsmI GAATGC 1 cut(s) 489
BsnI GGCC 4 cut(s) 308, 544, 588, 985
Bsp119I TTCGAA 2 cut(s) 213, 1018
Bsp1286I GDGCHC 1 cut(s) 62
Bsp143I GATC 4 cut(s) 94, 461, 664, 691
Bsp19I CCATGG 2 cut(s) 303, 470
BspACI CCGC 4 cut(s) 168, 241, 444, 922
BspANI GGCC 4 cut(s) 308, 544, 588, 985
BspCNI CTCAG 1 cut(s) 74
BspDI ATCGAT 2 cut(s) 329, 818
BspLI GGNNCC 2 cut(s) 686, 879
BspPI GGATC 2 cut(s) 469, 686
BspT104I TTCGAA 2 cut(s) 213, 1018
BspT107I GGYRCC 1 cut(s) 684
BsrI ACTGG 1 cut(s) 951
BssECI CCNNGG 4 cut(s) 268, 303, 470, 539
BssMI GATC 4 cut(s) 94, 461, 664, 691
BssT1I CCWWGG 3 cut(s) 268, 303, 470
Bst2UI CCWGG 1 cut(s) 541
BstBI TTCGAA 2 cut(s) 213, 1018
BstDEI CTNAG 3 cut(s) 61, 244, 379
BstDSI CCRYGG 2 cut(s) 303, 470
BstENI CCTNNNNNAGG 1 cut(s) 538
BstF5I GGATG 2 cut(s) 208, 901
BstKTI GATC 4 cut(s) 97, 464, 667, 694
BstMAI GTCTC 1 cut(s) 654
BstMBI GATC 4 cut(s) 94, 461, 664, 691
BstMWI GCNNNNNNNGC 1 cut(s) 928
BstNI CCWGG 1 cut(s) 541
BstNSI RCATGY 3 cut(s) 85, 681, 845
BstSCI CCNGG 1 cut(s) 539
BstV1I GCAGC 4 cut(s) 359, 362, 428, 931
Bsu15I ATCGAT 2 cut(s) 329, 818
BsuRI GGCC 4 cut(s) 308, 544, 588, 985
BsuTUI ATCGAT 2 cut(s) 329, 818
BtgI CCRYGG 2 cut(s) 303, 470
BtrI CACGTC 1 cut(s) 1000
BtsCI GGATG 2 cut(s) 208, 901
Cfr13I GGNCC 2 cut(s) 586, 877
ClaI ATCGAT 2 cut(s) 329, 818
Csp6I GTAC 4 cut(s) 38, 262, 342, 685
CviAII CATG 9 cut(s) 82, 304, 440, 471, 590, 653, 678, 842, 957
CviQI GTAC 4 cut(s) 38, 262, 342, 685
DdeI CTNAG 3 cut(s) 61, 244, 379
DpnI GATC 4 cut(s) 96, 463, 666, 693
DpnII GATC 4 cut(s) 94, 461, 664, 691
DraI TTTAAA 1 cut(s) 564
EaeI YGGCCR 1 cut(s) 306
Ecl136II GAGCTC 1 cut(s) 60
Eco130I CCWWGG 3 cut(s) 268, 303, 470
Eco24I GRGCYC 1 cut(s) 62
Eco47I GGWCC 1 cut(s) 877
Eco53kI GAGCTC 1 cut(s) 60
EcoICRI GAGCTC 1 cut(s) 60
EcoNI CCTNNNNNAGG 1 cut(s) 538
EcoRII CCWGG 1 cut(s) 539
EcoT14I CCWWGG 3 cut(s) 268, 303, 470
EcoT38I GRGCYC 1 cut(s) 62
ErhI CCWWGG 3 cut(s) 268, 303, 470
FaeI CATG 9 cut(s) 85, 307, 443, 474, 593, 656, 681, 845, 960
FalI AAGNNNNNCTT 2 cut(s) 414, 446
FaqI GGGAC 2 cut(s) 688, 789
FatI CATG 9 cut(s) 81, 303, 439, 470, 589, 652, 677, 841, 956
FauNDI CATATG 1 cut(s) 829
Fnu4HI GCNGC 5 cut(s) 373, 376, 417, 920, 923
FokI GGATG 2 cut(s) 215, 908
FriOI GRGCYC 1 cut(s) 62
Fsp4HI GCNGC 5 cut(s) 373, 376, 417, 920, 923
FspBI CTAG 3 cut(s) 233, 480, 1005
GluI GCNGC 5 cut(s) 373, 376, 417, 920, 923
HaeIII GGCC 4 cut(s) 308, 544, 588, 985
Hin1II CATG 9 cut(s) 85, 307, 443, 474, 593, 656, 681, 845, 960
HinfI GANTC 3 cut(s) 119, 207, 862
HphI GGTGA 1 cut(s) 601
Hpy166II GTNNAC 2 cut(s) 344, 877
Hpy188I TCNGA 3 cut(s) 224, 669, 867
Hpy188III TCNNGA 5 cut(s) 67, 314, 459, 557, 965
Hpy8I GTNNAC 2 cut(s) 344, 877
HpyAV CCTTC 4 cut(s) 36, 192, 705, 975
HpyCH4IV ACGT 2 cut(s) 299, 999
HpyF10VI GCNNNNNNNGC 1 cut(s) 928
HpyF3I CTNAG 3 cut(s) 61, 244, 379
HpySE526I ACGT 2 cut(s) 299, 999
Hsp92II CATG 9 cut(s) 85, 307, 443, 474, 593, 656, 681, 845, 960
KpnI GGTACC 1 cut(s) 688
Kzo9I GATC 4 cut(s) 94, 461, 664, 691
LpnPI CCDG 8 cut(s) 386, 408, 444, 526, 553, 583, 696, 932
Lsp1109I GCAGC 4 cut(s) 359, 362, 428, 931
LweI GCATC 1 cut(s) 321
MaeI CTAG 3 cut(s) 233, 480, 1005
MaeII ACGT 2 cut(s) 299, 999
MalI GATC 4 cut(s) 96, 463, 666, 693
MboI GATC 4 cut(s) 94, 461, 664, 691
MboII GAAGA 3 cut(s) 202, 671, 980
MfeI CAATTG 1 cut(s) 870
MhlI GDGCHC 1 cut(s) 62
MlsI TGGCCA 1 cut(s) 308
MluCI AATT 5 cut(s) 172, 489, 565, 870, 1020
MluNI TGGCCA 1 cut(s) 308
MnlI CCTC 4 cut(s) 218, 280, 648, 886
Mox20I TGGCCA 1 cut(s) 308
MroXI GAANNNNTTC 1 cut(s) 1014
MscI TGGCCA 1 cut(s) 308
MseI TTAA 5 cut(s) 177, 255, 432, 563, 770
MslI CAYNNNNRTG 5 cut(s) 329, 469, 594, 846, 955
Msp20I TGGCCA 1 cut(s) 308
MspA1I CMGCKG 2 cut(s) 573, 922
MspR9I CCNGG 1 cut(s) 541
MunI CAATTG 1 cut(s) 870
Mva1269I GAATGC 1 cut(s) 489
MvaI CCWGG 1 cut(s) 541
MwoI GCNNNNNNNGC 1 cut(s) 928
NcoI CCATGG 2 cut(s) 303, 470
NdeI CATATG 1 cut(s) 829
NdeII GATC 4 cut(s) 94, 461, 664, 691
NlaIII CATG 9 cut(s) 85, 307, 443, 474, 593, 656, 681, 845, 960
NlaIV GGNNCC 2 cut(s) 686, 879
NspI RCATGY 3 cut(s) 85, 681, 845
NspV TTCGAA 2 cut(s) 213, 1018
PciI ACATGT 2 cut(s) 677, 841
PctI GAATGC 1 cut(s) 489
PdmI GAANNNNTTC 1 cut(s) 1014
PfeI GAWTC 3 cut(s) 119, 207, 862
Pfl23II CGTACG 1 cut(s) 37
PkrI GCNGC 5 cut(s) 374, 377, 418, 921, 924
PscI ACATGT 2 cut(s) 677, 841
Psp124BI GAGCTC 1 cut(s) 62
Psp6I CCWGG 1 cut(s) 539
PspGI CCWGG 1 cut(s) 539
PspLI CGTACG 1 cut(s) 37
PspN4I GGNNCC 2 cut(s) 686, 879
PspPI GGNCC 2 cut(s) 586, 877
PvuII CAGCTG 1 cut(s) 573
RsaI GTAC 4 cut(s) 39, 263, 343, 686
RsaNI GTAC 4 cut(s) 38, 262, 342, 685
RseI CAYNNNNRTG 5 cut(s) 329, 469, 594, 846, 955
SacI GAGCTC 1 cut(s) 62
SaqAI TTAA 5 cut(s) 177, 255, 432, 563, 770
SatI GCNGC 5 cut(s) 373, 376, 417, 920, 923
Sau3AI GATC 4 cut(s) 94, 461, 664, 691
Sau96I GGNCC 2 cut(s) 586, 877
ScaI AGTACT 1 cut(s) 263
ScrFI CCNGG 1 cut(s) 541
SduI GDGCHC 1 cut(s) 62
SetI ASST 9 cut(s) 62, 156, 229, 302, 400, 575, 690, 746, 1002
SfaNI GCATC 1 cut(s) 321
SfuI TTCGAA 2 cut(s) 213, 1018
SinI GGWCC 1 cut(s) 877
SmiI ATTTAAAT 1 cut(s) 564
SmiMI CAYNNNNRTG 5 cut(s) 329, 469, 594, 846, 955
SmlI CTYRAG 1 cut(s) 963
SmoI CTYRAG 1 cut(s) 963
Sse9I AATT 5 cut(s) 172, 489, 565, 870, 1020
SsiI CCGC 4 cut(s) 168, 241, 444, 922
SspMI CTAG 3 cut(s) 233, 480, 1005
SstI GAGCTC 1 cut(s) 62
StyD4I CCNGG 1 cut(s) 539
StyI CCWWGG 3 cut(s) 268, 303, 470
SwaI ATTTAAAT 1 cut(s) 564
TaiI ACGT 2 cut(s) 302, 1002
TaqI TCGA 4 cut(s) 213, 329, 818, 1018
TasI AATT 5 cut(s) 172, 489, 565, 870, 1020
TatI WGTACW 2 cut(s) 261, 341
TauI GCSGC 1 cut(s) 925
TfiI GAWTC 3 cut(s) 119, 207, 862
Tru1I TTAA 5 cut(s) 177, 255, 432, 563, 770
Tru9I TTAA 5 cut(s) 177, 255, 432, 563, 770
TseI GCWGC 4 cut(s) 372, 375, 416, 919
TspDTI ATGAA 1 cut(s) 542
VpaK11BI GGWCC 1 cut(s) 877
XagI CCTNNNNNAGG 1 cut(s) 538
XapI RAATTY 1 cut(s) 565
XceI RCATGY 3 cut(s) 85, 681, 845
XmnI GAANNNNTTC 1 cut(s) 1014
XspI CTAG 3 cut(s) 233, 480, 1005
ZrmI AGTACT 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.