MD05G1105300.v1.1

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
21852529 .. 21854509
1981 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1105300.v1.1.491

Sequence Viewer

Length: 1059 bp
ATGCCATCAAAACTTGTGAAACTGTTCTCAAGGCTGCCATTTTTTAGAAGGAAGGAAAGATATATCGAGTCGTCATACTACAAGAATCTAAAAAAGTTATTAGAGGATCTCTTTGCTTCTGGTGATGGCGAATCACATCCTATTCATTGTTACTCTGCTGATGACCTCATCAGGGCAACTAACAACTTCCATCCTTCTCGCATTGTAGAAAGGTATTCATGCTACGAAATTTTCAGGGGATTTCTAGATGGCCGATCAATTATCGTTAAAAAGTACCCCCTTGGGAACGGTCCAAATGAGGATAGGAGCAGGTCTAGGGTTATTCGTGACATTGTCATTTCATTACAGATGAGCAACCATGAGAATGTTTTGAAACTCTTGGGCTGCTGCTTAGAGTTCCCTATACCAGTGCTAGTGCATGAATACGTAGCAAAAGGAGTTCTCAACCCTGATGCAAGTTTAAGAGGGGCTAATGAAGATCAAATCATACTACCATGGAACATTAGATTGTGTATTGCAAAGCAGGTTGCCAGTGCAGTTTCATATCTCCATACCGCTTTTGCCGGACCCATCATTCATAGGGATCTGAAACCCAGCTGCCTGTTCTTGGATGATGACTATGTTCCCAAACTTCACAACTTCTCGCTCTCTATAACCATTCCTCCTATGGAATCGGATGTTGAAGATGATGTGACTGGGACAATTGGGTACATTGACCCTGTCTACCTGTGGTCTAATCGCATTACAGAAAAAACTGATGTTTATAGCTTTGGTGTGCTTTTACTTGTATTCCTGACGGGACGAACACCTTGGGAAATTTGGCGGGTGGAAGGAATTCCAATGATTCCATATGCTCGTGGTTGTGATGGTCGAATTGGGGAAATTGTTGATCCGAAAATCTATGAGGAAGTGAGGGGGAATGAGCAAGTACAACAGCAGTTGCATGATTTCCTTGAACTGGCATTGTTATGCATTCGAGATGACATTGAAGGAAGGCCATACATGGTGGATGTGGCTAGAGAACTCATTCGAATTGAAGAATTTGTTTTGGCCAGCTAG

Protein Analysis

353

Amino Acids

40.4

Weight (kDa)

5.67

Isoelectric Point (pI)

39.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 87 - 275 4.4e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 87 - 342 5.4e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 300, 514
AccI GTMKAC 1 cut(s) 723
AciI CCGC 2 cut(s) 555, 823
AclWI GGATC 3 cut(s) 114, 591, 884
AcoI YGGCCR 2 cut(s) 250, 1050
AcsI RAATTY 4 cut(s) 228, 816, 834, 1040
AfaI GTAC 3 cut(s) 275, 710, 930
AfiI CCNNNNNNNGG 3 cut(s) 172, 607, 958
AgsI TTSAA 5 cut(s) 373, 683, 956, 989, 1037
AluBI AGCT 3 cut(s) 597, 768, 1056
AluI AGCT 3 cut(s) 597, 768, 1056
AlwI GGATC 3 cut(s) 114, 591, 884
AoxI GGCC 3 cut(s) 250, 995, 1050
ApeKI GCWGC 4 cut(s) 34, 384, 387, 597
ApoI RAATTY 4 cut(s) 228, 816, 834, 1040
Asp700I GAANNNNTTC 3 cut(s) 23, 834, 1026
AspS9I GGNCC 2 cut(s) 290, 566
AsuHPI GGTGA 1 cut(s) 134
AsuII TTCGAA 1 cut(s) 1030
AvaII GGWCC 2 cut(s) 290, 566
BalI TGGCCA 1 cut(s) 1052
BauI CACGAG 1 cut(s) 855
BbvI GCAGC 4 cut(s) 21, 371, 374, 584
BccI CCATC 6 cut(s) 13, 119, 198, 242, 578, 860
BfaI CTAG 5 cut(s) 245, 315, 413, 1017, 1057
BfuAI ACCTGC 2 cut(s) 300, 514
BisI GCNGC 4 cut(s) 35, 385, 388, 598
BlsI GCNGC 4 cut(s) 36, 386, 389, 599
Bme18I GGWCC 2 cut(s) 290, 566
BmgT120I GGNCC 2 cut(s) 290, 566
BmiI GGNNCC 1 cut(s) 568
BmrI ACTGGG 1 cut(s) 705
BmsI GCATC 1 cut(s) 442
BmuI ACTGGG 1 cut(s) 705
Bpu14I TTCGAA 1 cut(s) 1030
BpuEI CTTGAG 1 cut(s) 13
BsaAI YACGTR 1 cut(s) 427
BsaJI CCNNGG 3 cut(s) 280, 494, 809
BsaXI ACNNNNNCTCC 2 cut(s) 646, 676
Bsc4I CCNNNNNNNGG 3 cut(s) 172, 607, 958
Bse1I ACTGG 4 cut(s) 407, 531, 700, 963
BseDI CCNNGG 3 cut(s) 280, 494, 809
BseGI GGATG 5 cut(s) 136, 190, 616, 682, 1015
BseLI CCNNNNNNNGG 3 cut(s) 172, 607, 958
BseNI ACTGG 4 cut(s) 407, 531, 700, 963
BseXI GCAGC 4 cut(s) 21, 371, 374, 584
BseYI CCCAGC 1 cut(s) 593
BsgI GTGCAG 1 cut(s) 555
BshFI GGCC 3 cut(s) 252, 997, 1052
BsiSI CCGG 1 cut(s) 564
BslFI GGGAC 2 cut(s) 712, 813
BslI CCNNNNNNNGG 3 cut(s) 172, 607, 958
BsmFI GGGAC 2 cut(s) 712, 813
BsmI GAATGC 1 cut(s) 972
BsnI GGCC 3 cut(s) 252, 997, 1052
Bsp119I TTCGAA 1 cut(s) 1030
Bsp143I GATC 5 cut(s) 106, 254, 478, 583, 889
Bsp19I CCATGG 1 cut(s) 494
BspACI CCGC 2 cut(s) 555, 823
BspANI GGCC 3 cut(s) 252, 997, 1052
BspLI GGNNCC 1 cut(s) 568
BspMI ACCTGC 2 cut(s) 300, 514
BspPI GGATC 3 cut(s) 114, 591, 884
BspT104I TTCGAA 1 cut(s) 1030
BsrI ACTGG 4 cut(s) 407, 531, 700, 963
BssECI CCNNGG 3 cut(s) 280, 494, 809
BssMI GATC 5 cut(s) 106, 254, 478, 583, 889
BssSI CACGAG 1 cut(s) 855
BssT1I CCWWGG 3 cut(s) 280, 494, 809
Bst2BI CACGAG 1 cut(s) 855
Bst4CI ACNGT 2 cut(s) 24, 290
BstBAI YACGTR 1 cut(s) 427
BstBI TTCGAA 1 cut(s) 1030
BstC8I GCNNGC 1 cut(s) 1054
BstDEI CTNAG 1 cut(s) 391
BstDSI CCRYGG 1 cut(s) 494
BstF5I GGATG 5 cut(s) 136, 190, 616, 682, 1015
BstKTI GATC 5 cut(s) 109, 257, 481, 586, 892
BstMBI GATC 5 cut(s) 106, 254, 478, 583, 889
BstSNI TACGTA 1 cut(s) 427
BstV1I GCAGC 4 cut(s) 21, 371, 374, 584
BstX2I RGATCY 2 cut(s) 106, 583
BstYI RGATCY 2 cut(s) 106, 583
BsuRI GGCC 3 cut(s) 252, 997, 1052
BtgI CCRYGG 1 cut(s) 494
BtsCI GGATG 5 cut(s) 136, 190, 616, 682, 1015
BtsIMutI CAGTG 2 cut(s) 414, 538
BveI ACCTGC 2 cut(s) 300, 514
Cac8I GCNNGC 1 cut(s) 1054
Cfr13I GGNCC 2 cut(s) 290, 566
Csp6I GTAC 3 cut(s) 274, 709, 929
CviAII CATG 6 cut(s) 219, 359, 419, 495, 944, 1003
CviQI GTAC 3 cut(s) 274, 709, 929
DdeI CTNAG 1 cut(s) 391
DpnI GATC 5 cut(s) 108, 256, 480, 585, 891
DpnII GATC 5 cut(s) 106, 254, 478, 583, 889
EaeI YGGCCR 2 cut(s) 250, 1050
Eco105I TACGTA 1 cut(s) 427
Eco130I CCWWGG 3 cut(s) 280, 494, 809
Eco47I GGWCC 2 cut(s) 290, 566
EcoRI GAATTC 1 cut(s) 834
EcoT14I CCWWGG 3 cut(s) 280, 494, 809
EcoT22I ATGCAT 1 cut(s) 974
ErhI CCWWGG 3 cut(s) 280, 494, 809
FaeI CATG 6 cut(s) 222, 362, 422, 498, 947, 1006
FaqI GGGAC 2 cut(s) 712, 813
FatI CATG 6 cut(s) 218, 358, 418, 494, 943, 1002
FauI CCCGC 1 cut(s) 816
FauNDI CATATG 1 cut(s) 850
FblI GTMKAC 1 cut(s) 723
Fnu4HI GCNGC 4 cut(s) 35, 385, 388, 598
FokI GGATG 5 cut(s) 123, 177, 623, 689, 1022
Fsp4HI GCNGC 4 cut(s) 35, 385, 388, 598
FspBI CTAG 5 cut(s) 245, 315, 413, 1017, 1057
GluI GCNGC 4 cut(s) 35, 385, 388, 598
GsaI CCCAGC 1 cut(s) 597
HaeIII GGCC 3 cut(s) 252, 997, 1052
HapII CCGG 1 cut(s) 564
Hin1II CATG 6 cut(s) 222, 362, 422, 498, 947, 1006
HinfI GANTC 5 cut(s) 68, 85, 131, 671, 844
HpaII CCGG 1 cut(s) 564
HphI GGTGA 1 cut(s) 134
Hpy166II GTNNAC 1 cut(s) 724
Hpy188I TCNGA 3 cut(s) 588, 676, 894
Hpy188III TCNNGA 4 cut(s) 245, 326, 793, 977
Hpy8I GTNNAC 1 cut(s) 724
HpyAV CCTTC 6 cut(s) 42, 46, 204, 824, 983, 987
HpyCH4III ACNGT 2 cut(s) 24, 290
HpyCH4IV ACGT 1 cut(s) 426
HpyCH4V TGCA 6 cut(s) 418, 455, 518, 536, 943, 972
HpyF3I CTNAG 1 cut(s) 391
HpySE526I ACGT 1 cut(s) 426
Hsp92II CATG 6 cut(s) 222, 362, 422, 498, 947, 1006
Kzo9I GATC 5 cut(s) 106, 254, 478, 583, 889
LmnI GCTCC 1 cut(s) 306
Lsp1109I GCAGC 4 cut(s) 21, 371, 374, 584
LweI GCATC 1 cut(s) 442
MaeI CTAG 5 cut(s) 245, 315, 413, 1017, 1057
MaeII ACGT 1 cut(s) 426
MaeIII GTNAC 3 cut(s) 149, 326, 691
MalI GATC 5 cut(s) 108, 256, 480, 585, 891
MboI GATC 5 cut(s) 106, 254, 478, 583, 889
MboII GAAGA 3 cut(s) 488, 695, 1049
MfeI CAATTG 1 cut(s) 702
MflI RGATCY 2 cut(s) 106, 583
MlsI TGGCCA 1 cut(s) 1052
MluCI AATT 9 cut(s) 228, 258, 702, 816, 834, 873, 882, 1032, 1040
MluNI TGGCCA 1 cut(s) 1052
MlyI GAGTC 1 cut(s) 77
MnlI CCTC 7 cut(s) 97, 176, 292, 458, 672, 898, 906
Mox20I TGGCCA 1 cut(s) 1052
Mph1103I ATGCAT 1 cut(s) 974
MroXI GAANNNNTTC 3 cut(s) 23, 834, 1026
MscI TGGCCA 1 cut(s) 1052
MseI TTAA 2 cut(s) 267, 461
MslI CAYNNNNRTG 2 cut(s) 363, 967
Msp20I TGGCCA 1 cut(s) 1052
MspA1I CMGCKG 1 cut(s) 597
MspI CCGG 1 cut(s) 564
MunI CAATTG 1 cut(s) 702
Mva1269I GAATGC 1 cut(s) 972
NcoI CCATGG 1 cut(s) 494
NdeI CATATG 1 cut(s) 850
NdeII GATC 5 cut(s) 106, 254, 478, 583, 889
NlaIII CATG 6 cut(s) 222, 362, 422, 498, 947, 1006
NlaIV GGNNCC 1 cut(s) 568
NmuCI GTSAC 2 cut(s) 326, 691
NsiI ATGCAT 1 cut(s) 974
NspV TTCGAA 1 cut(s) 1030
PctI GAATGC 1 cut(s) 972
PdmI GAANNNNTTC 3 cut(s) 23, 834, 1026
PfeI GAWTC 4 cut(s) 85, 131, 671, 844
PflFI GACNNNGTC 2 cut(s) 332, 719
PkrI GCNGC 4 cut(s) 36, 386, 389, 599
PleI GAGTC 1 cut(s) 76
PpsI GAGTC 1 cut(s) 76
Ppu21I YACGTR 1 cut(s) 427
PspFI CCCAGC 1 cut(s) 593
PspN4I GGNNCC 1 cut(s) 568
PspPI GGNCC 2 cut(s) 290, 566
PsuI RGATCY 2 cut(s) 106, 583
PsyI GACNNNGTC 2 cut(s) 332, 719
PvuII CAGCTG 1 cut(s) 597
RsaI GTAC 3 cut(s) 275, 710, 930
RsaNI GTAC 3 cut(s) 274, 709, 929
RseI CAYNNNNRTG 2 cut(s) 363, 967
SaqAI TTAA 2 cut(s) 267, 461
SatI GCNGC 4 cut(s) 35, 385, 388, 598
Sau3AI GATC 5 cut(s) 106, 254, 478, 583, 889
Sau96I GGNCC 2 cut(s) 290, 566
SchI GAGTC 1 cut(s) 77
SfaNI GCATC 1 cut(s) 442
SfuI TTCGAA 1 cut(s) 1030
SinI GGWCC 2 cut(s) 290, 566
SmiMI CAYNNNNRTG 2 cut(s) 363, 967
SmlI CTYRAG 1 cut(s) 28
SmoI CTYRAG 1 cut(s) 28
SnaBI TACGTA 1 cut(s) 427
Sse9I AATT 9 cut(s) 228, 258, 702, 816, 834, 873, 882, 1032, 1040
SsiI CCGC 2 cut(s) 555, 823
SspMI CTAG 5 cut(s) 245, 315, 413, 1017, 1057
StyI CCWWGG 3 cut(s) 280, 494, 809
TaaI ACNGT 2 cut(s) 24, 290
TaiI ACGT 1 cut(s) 429
TaqI TCGA 4 cut(s) 66, 871, 976, 1030
TasI AATT 9 cut(s) 228, 258, 702, 816, 834, 873, 882, 1032, 1040
TatI WGTACW 1 cut(s) 928
TfiI GAWTC 4 cut(s) 85, 131, 671, 844
Tru1I TTAA 2 cut(s) 267, 461
Tru9I TTAA 2 cut(s) 267, 461
TscAI CASTG 2 cut(s) 414, 538
TseFI GTSAC 2 cut(s) 326, 691
TseI GCWGC 4 cut(s) 34, 384, 387, 597
Tsp45I GTSAC 2 cut(s) 326, 691
TspDTI ATGAA 7 cut(s) 134, 207, 330, 435, 489, 531, 566
TspRI CASTG 2 cut(s) 414, 538
Tth111I GACNNNGTC 2 cut(s) 332, 719
VpaK11BI GGWCC 2 cut(s) 290, 566
XapI RAATTY 4 cut(s) 228, 816, 834, 1040
XbaI TCTAGA 1 cut(s) 244
XcmI CCANNNNNNNNNTGG 1 cut(s) 664
XmiI GTMKAC 1 cut(s) 723
XmnI GAANNNNTTC 3 cut(s) 23, 834, 1026
XspI CTAG 5 cut(s) 245, 315, 413, 1017, 1057
Zsp2I ATGCAT 1 cut(s) 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.