RchiOBHm_Chr6g0248531

protein serine/threonine kinase activity

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
4533472 .. 4535280
1809 bp
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UTR
Exon/CDS
Intron
PRQ22276

Sequence Viewer

Length: 261 bp
ATGTTAAGAAATCAGGCAGGAGAATATCATGAGCACATAATTCCATATGTGAAATCACATGCTTCTGGTGGCCAAGTTCAAACCATTATGGATCCTAAAATATCTATGGAGGTAGGGGGAGCTGAACCAATACACCAGCAATTGCATGATTTCCTAGCACTGGCATTGTTATGCAATGAAGATAAAAGTGAAGAAAGGCCAGATATGATCGATGTGGCCAAAGAACTCGTACGAATTGAGAATTTTATCTCGAGTGGCTAG

Protein Analysis

86

Amino Acids

9.63

Weight (kDa)

5.01

Isoelectric Point (pI)

35.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 86, 99
AcoI YGGCCR 2 cut(s) 70, 216
AcsI RAATTY 1 cut(s) 241
AfaI GTAC 1 cut(s) 231
AfiI CCNNNNNNNGG 1 cut(s) 160
AgsI TTSAA 1 cut(s) 80
AluBI AGCT 1 cut(s) 122
AluI AGCT 1 cut(s) 122
Alw21I GWGCWC 1 cut(s) 36
AlwI GGATC 2 cut(s) 86, 99
Ama87I CYCGRG 1 cut(s) 250
AoxI GGCC 3 cut(s) 70, 197, 216
ApoI RAATTY 1 cut(s) 241
AvaI CYCGRG 1 cut(s) 250
BalI TGGCCA 2 cut(s) 72, 218
BamHI GGATCC 1 cut(s) 91
Bbv12I GWGCWC 1 cut(s) 36
BfaI CTAG 2 cut(s) 155, 259
BmeT110I CYCGRG 1 cut(s) 250
BmiI GGNNCC 1 cut(s) 93
Bsa29I ATCGAT 1 cut(s) 210
Bsc4I CCNNNNNNNGG 1 cut(s) 160
Bse1I ACTGG 1 cut(s) 165
Bse3DI GCAATG 1 cut(s) 181
BseCI ATCGAT 1 cut(s) 210
BseLI CCNNNNNNNGG 1 cut(s) 160
BseMI GCAATG 1 cut(s) 181
BseNI ACTGG 1 cut(s) 165
BshFI GGCC 3 cut(s) 72, 199, 218
BshVI ATCGAT 1 cut(s) 210
BsiHKAI GWGCWC 1 cut(s) 36
BsiHKCI CYCGRG 1 cut(s) 250
BsiWI CGTACG 1 cut(s) 229
BslI CCNNNNNNNGG 1 cut(s) 160
BsnI GGCC 3 cut(s) 72, 199, 218
BsoBI CYCGRG 1 cut(s) 250
Bsp1286I GDGCHC 1 cut(s) 36
Bsp143I GATC 2 cut(s) 91, 207
BspANI GGCC 3 cut(s) 72, 199, 218
BspDI ATCGAT 1 cut(s) 210
BspHI TCATGA 1 cut(s) 28
BspLI GGNNCC 1 cut(s) 93
BspPI GGATC 2 cut(s) 86, 99
BsrDI GCAATG 1 cut(s) 181
BsrI ACTGG 1 cut(s) 165
BssMI GATC 2 cut(s) 91, 207
BstKTI GATC 2 cut(s) 94, 210
BstMBI GATC 2 cut(s) 91, 207
BstNSI RCATGY 1 cut(s) 62
BstX2I RGATCY 1 cut(s) 91
BstYI RGATCY 1 cut(s) 91
Bsu15I ATCGAT 1 cut(s) 210
BsuRI GGCC 3 cut(s) 72, 199, 218
BsuTUI ATCGAT 1 cut(s) 210
BtsIMutI CAGTG 1 cut(s) 158
CciI TCATGA 1 cut(s) 28
ClaI ATCGAT 1 cut(s) 210
Csp6I GTAC 1 cut(s) 230
CviAII CATG 3 cut(s) 29, 59, 146
CviJI RGCY 5 cut(s) 72, 122, 199, 218, 258
CviKI_1 RGCY 5 cut(s) 72, 122, 199, 218, 258
CviQI GTAC 1 cut(s) 230
DpnI GATC 2 cut(s) 93, 209
DpnII GATC 2 cut(s) 91, 207
EaeI YGGCCR 2 cut(s) 70, 216
Eco88I CYCGRG 1 cut(s) 250
FaeI CATG 3 cut(s) 32, 62, 149
FatI CATG 3 cut(s) 28, 58, 145
FauNDI CATATG 1 cut(s) 46
FspBI CTAG 2 cut(s) 155, 259
HaeIII GGCC 3 cut(s) 72, 199, 218
Hin1II CATG 3 cut(s) 32, 62, 149
Hpy188III TCNNGA 2 cut(s) 29, 250
HpyCH4V TGCA 2 cut(s) 145, 174
Hsp92II CATG 3 cut(s) 32, 62, 149
Kzo9I GATC 2 cut(s) 91, 207
LmnI GCTCC 1 cut(s) 119
LpnPI CCDG 5 cut(s) 3, 51, 146, 149, 213
MaeI CTAG 2 cut(s) 155, 259
MalI GATC 2 cut(s) 93, 209
MboI GATC 2 cut(s) 91, 207
MboII GAAGA 2 cut(s) 191, 203
MfeI CAATTG 1 cut(s) 140
MflI RGATCY 1 cut(s) 91
MhlI GDGCHC 1 cut(s) 36
MlsI TGGCCA 2 cut(s) 72, 218
MluCI AATT 4 cut(s) 39, 140, 234, 241
MluNI TGGCCA 2 cut(s) 72, 218
MnlI CCTC 1 cut(s) 103
Mox20I TGGCCA 2 cut(s) 72, 218
MscI TGGCCA 2 cut(s) 72, 218
MseI TTAA 1 cut(s) 5
MslI CAYNNNNRTG 1 cut(s) 169
Msp20I TGGCCA 2 cut(s) 72, 218
MunI CAATTG 1 cut(s) 140
NdeI CATATG 1 cut(s) 46
NdeII GATC 2 cut(s) 91, 207
NlaIII CATG 3 cut(s) 32, 62, 149
NlaIV GGNNCC 1 cut(s) 93
NspI RCATGY 1 cut(s) 62
PaeR7I CTCGAG 1 cut(s) 250
PagI TCATGA 1 cut(s) 28
Pfl23II CGTACG 1 cut(s) 229
PspLI CGTACG 1 cut(s) 229
PspN4I GGNNCC 1 cut(s) 93
PsuI RGATCY 1 cut(s) 91
RsaI GTAC 1 cut(s) 231
RsaNI GTAC 1 cut(s) 230
RseI CAYNNNNRTG 1 cut(s) 169
SaqAI TTAA 1 cut(s) 5
Sau3AI GATC 2 cut(s) 91, 207
SduI GDGCHC 1 cut(s) 36
SetI ASST 2 cut(s) 114, 124
Sfr274I CTCGAG 1 cut(s) 250
SlaI CTCGAG 1 cut(s) 250
SmiMI CAYNNNNRTG 1 cut(s) 169
SmlI CTYRAG 1 cut(s) 250
SmoI CTYRAG 1 cut(s) 250
Sse9I AATT 4 cut(s) 39, 140, 234, 241
SspMI CTAG 2 cut(s) 155, 259
TaqI TCGA 2 cut(s) 210, 251
TasI AATT 4 cut(s) 39, 140, 234, 241
Tru1I TTAA 1 cut(s) 5
Tru9I TTAA 1 cut(s) 5
TscAI CASTG 1 cut(s) 165
TspDTI ATGAA 1 cut(s) 192
TspRI CASTG 1 cut(s) 165
XapI RAATTY 1 cut(s) 241
XceI RCATGY 1 cut(s) 62
XhoI CTCGAG 1 cut(s) 250
XspI CTAG 2 cut(s) 155, 259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.