MD10G1109400.v1.1

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
18030345 .. 18031028
684 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1109400.v1.1.491

Sequence Viewer

Length: 684 bp
ATGTATATATTTTGTACCAGTTTCTCCTTGCGTCCAAGTGTAAGAAAGGCTGAAAGGGAGAGCTCATTCTTGAAAAATGGAAGCATGTTATTGGAGGATTTTATTGCTTCGTGTGATGGAAAATCTAGCCCTATTCACACATACTCTGCTGATGAGCTCGTCAAGGCAACTGACAATTTTGATCCTTCTTGCCTTATAAGTGAGGATTCATTCTTCCAACTGTTCAGAGGTTTCCTAGATGACGGCTCAGTTCTCATTAAGAAGTACTTCCAAGGGCCCTGGCCTATTGAGGTTGAAGTTACATCCATGGCCAGTCATGATATTATCATATTGATGCAGATGAGTACGCATAAGAACGTTTTGAAACTCTTGGGCTGCTGCTTAGAGTTCTCTATACCAGCTCTGGTGCTTGAATACGTAGCAAAAGGAGTTCTCGACCACCATGGATGTTTAGGGGATACTGAATCATTACCACGGAAAACTAGAATGCTAATTGCAAAGAAAGTTGCAAATGCACTTGCATATCTCCATACTGCCTTTTCCAGGCCCATCATTCATAGGGATCTAAACCCCACATGCATTTTCTTGGACGATGACTACTTTCCCAAACTCTCCAACTTTTCACTATCGATCACGATTCCTCCTCAACAATTGCACGTTGAAGATGATGTGAAAGGAACGTGA

Protein Analysis

228

Amino Acids

25.5

Weight (kDa)

5.72

Isoelectric Point (pI)

36.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 107 - 216 5.2e-15 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 107 - 217 1.7e-13 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000327)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57700 AT3G57710 AT3G57720 AT3G57730 AT3G57750 AT3G57750 AT3G57770
fragaria_vesca FvH4_2g03430 FvH4_2g03431 FvH4_2g09830
malus_domestica MD05G1105000.v1.1 MD05G1105300.v1.1 MD10G1109300.v1.1 MD10G1109400.v1.1 MD10G1109700.v1.1 MD10G1109800.v1.1
prunus_persica Prupe.8G149300_v2.0.a1 Prupe.8G149400_v2.0.a1 Prupe.8G149500_v2.0.a1 Prupe.8G149600_v2.0.a1 Prupe.8G149700_v2.0.a1 Prupe.8G149800_v2.0.a1
pyrus_communis pycom05g10130 pycom05g10140 pycom05g10190 pycom05g10200 pycom05g10210 pycom05g10220 pycom10g09470 pycom10g09500 pycom10g09510 pycom10g09520
rosa_chinensis RchiOBHm_Chr6g0248521 RchiOBHm_Chr6g0248531 RchiOBHm_Chr6g0248551 RchiOBHm_Chr6g0248561 RchiOBHm_Chr6g0248591 RchiOBHm_Chr6g0252471 RchiOBHm_Chr6g0266181 RchiOBHm_Chr6g0266231 RchiOBHm_Chr7g0194481 RchiOBHm_Chr7g0194491 RchiOBHm_Chr7g0194561
rosa_laevigata RLG00000004197 RLG00000014108 RLG00000015141 RLG00000015142 RLG00000015143 RLG00000015145 RLG00000015148 RLG00000015149
rosa_multiflora Rmu_sc0002393.1_g000003 Rmu_sc0002553.1_g000019 Rmu_sc0002553.1_g000020 Rmu_sc0002553.1_g000027 Rmu_sc0002553.1_g000029 Rmu_sc0002553.1_g000033 Rmu_sc0003605.1_g000049 Rmu_sc0013794.1_g000007
rosa_roxburghii Rroxscaffold_174G00435350 Rroxscaffold_3G00261310 Rroxscaffold_7G00201830 Rroxscaffold_7G00212700 Rroxscaffold_7G00213190 Rroxscaffold_7G00213210 Rroxscaffold_7G00213220 Rroxscaffold_7G00213240
rosa_rugosa Rorug05G0531800 Rorug05G0531900 Rorug05G0532100 Rorug05G0532300 Rorug05G0535800 Rorug05G0535900 Rorug06G0024600 Rorug07G0015900 Rorug07G0016300
rosa_samantha Rh6AG047700 Rh6AG048000 Rh6AG048100 Rh6AG048800 Rh6AG049000 Rh6AG049100 Rh6AG049200 Rh6AG052200 Rh6AG145300 Rh6BG044000 Rh6BG044200 Rh6BG044500 Rh6BG044800 Rh6BG044900 Rh6BG045000 Rh6CG040700 Rh6CG041100 Rh6CG045000 Rh6CG142400 Rh6CG142500 Rh6DG037100 Rh6DG037300 Rh6DG037400 Rh6DG037500 Rh6DG040700 Rh7BG143800
rosa_wichuraiana Rw6G004140 Rw6G004190 Rw6G004200 Rw6G004210 Rw6G004220 Rw6G004240 Rw6G004250 Rw6G004350 Rw6G004710 Rw6G012550 Rw7G012270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 197
AclI AACGTT 1 cut(s) 357
AclWI GGATC 2 cut(s) 176, 570
AcoI YGGCCR 1 cut(s) 309
AfaI GTAC 3 cut(s) 16, 266, 346
AfiI CCNNNNNNNGG 1 cut(s) 543
AgsI TTSAA 5 cut(s) 73, 296, 364, 413, 662
AjnI CCWGG 2 cut(s) 278, 542
AluBI AGCT 3 cut(s) 63, 157, 401
AluI AGCT 3 cut(s) 63, 157, 401
Alw21I GWGCWC 2 cut(s) 65, 159
AlwI GGATC 2 cut(s) 176, 570
AoxI GGCC 4 cut(s) 275, 281, 309, 545
ApaI GGGCCC 1 cut(s) 279
ApeKI GCWGC 2 cut(s) 375, 378
Asp700I GAANNNNTTC 1 cut(s) 266
AspS9I GGNCC 3 cut(s) 275, 276, 546
BaeGI GKGCMC 1 cut(s) 279
BalI TGGCCA 1 cut(s) 311
BanII GRGCYC 3 cut(s) 65, 159, 279
Bbv12I GWGCWC 2 cut(s) 65, 159
BbvI GCAGC 2 cut(s) 362, 365
BccI CCATC 2 cut(s) 110, 557
BceAI ACGGC 1 cut(s) 259
BciT130I CCWGG 2 cut(s) 280, 544
BciVI GTATCC 1 cut(s) 451
BfaI CTAG 3 cut(s) 126, 236, 483
BfuI GTATCC 1 cut(s) 451
BisI GCNGC 2 cut(s) 376, 379
BlsI GCNGC 2 cut(s) 377, 380
BmcAI AGTACT 1 cut(s) 266
Bme1390I CCNGG 2 cut(s) 280, 544
BmgT120I GGNCC 3 cut(s) 275, 276, 546
BmiI GGNNCC 1 cut(s) 277
BmrFI CCNGG 2 cut(s) 280, 544
BmsI GCATC 1 cut(s) 324
Bsa29I ATCGAT 1 cut(s) 629
BsaAI YACGTR 1 cut(s) 418
BsaJI CCNNGG 5 cut(s) 271, 278, 306, 442, 473
BsaXI ACNNNNNCTCC 2 cut(s) 625, 655
Bsc4I CCNNNNNNNGG 1 cut(s) 543
Bse1I ACTGG 2 cut(s) 18, 312
BseBI CCWGG 2 cut(s) 280, 544
BseCI ATCGAT 1 cut(s) 629
BseDI CCNNGG 5 cut(s) 271, 278, 306, 442, 473
BseGI GGATG 2 cut(s) 302, 452
BseLI CCNNNNNNNGG 1 cut(s) 543
BseMII CTCAG 1 cut(s) 261
BseNI ACTGG 2 cut(s) 18, 312
BseRI GAGGAG 1 cut(s) 633
BseSI GKGCMC 1 cut(s) 279
BseXI GCAGC 2 cut(s) 362, 365
BshFI GGCC 4 cut(s) 277, 283, 311, 547
BshVI ATCGAT 1 cut(s) 629
BsiHKAI GWGCWC 2 cut(s) 65, 159
BslI CCNNNNNNNGG 1 cut(s) 543
BsmI GAATGC 1 cut(s) 492
BsnI GGCC 4 cut(s) 277, 283, 311, 547
Bsp120I GGGCCC 1 cut(s) 275
Bsp1286I GDGCHC 3 cut(s) 65, 159, 279
Bsp143I GATC 3 cut(s) 181, 562, 630
Bsp19I CCATGG 2 cut(s) 306, 442
BspANI GGCC 4 cut(s) 277, 283, 311, 547
BspCNI CTCAG 1 cut(s) 260
BspDI ATCGAT 1 cut(s) 629
BspHI TCATGA 1 cut(s) 316
BspLI GGNNCC 1 cut(s) 277
BspPI GGATC 2 cut(s) 176, 570
BsrI ACTGG 2 cut(s) 18, 312
BssECI CCNNGG 5 cut(s) 271, 278, 306, 442, 473
BssMI GATC 3 cut(s) 181, 562, 630
BssT1I CCWWGG 3 cut(s) 271, 306, 442
Bst2UI CCWGG 2 cut(s) 280, 544
Bst4CI ACNGT 1 cut(s) 222
BstBAI YACGTR 1 cut(s) 418
BstDEI CTNAG 2 cut(s) 247, 382
BstDSI CCRYGG 3 cut(s) 306, 442, 473
BstENI CCTNNNNNAGG 1 cut(s) 541
BstF5I GGATG 2 cut(s) 302, 452
BstKTI GATC 3 cut(s) 184, 565, 633
BstMBI GATC 3 cut(s) 181, 562, 630
BstNI CCWGG 2 cut(s) 280, 544
BstNSI RCATGY 2 cut(s) 88, 579
BstSCI CCNGG 2 cut(s) 278, 542
BstSLI GKGCMC 1 cut(s) 279
BstSNI TACGTA 1 cut(s) 418
BstV1I GCAGC 2 cut(s) 362, 365
BstX2I RGATCY 1 cut(s) 562
BstYI RGATCY 1 cut(s) 562
Bsu15I ATCGAT 1 cut(s) 629
BsuI GTATCC 1 cut(s) 451
BsuRI GGCC 4 cut(s) 277, 283, 311, 547
BsuTUI ATCGAT 1 cut(s) 629
BtgI CCRYGG 3 cut(s) 306, 442, 473
BtsCI GGATG 2 cut(s) 302, 452
CciI TCATGA 1 cut(s) 316
Cfr13I GGNCC 3 cut(s) 275, 276, 546
ClaI ATCGAT 1 cut(s) 629
CseI GACGC 1 cut(s) 20
Csp6I GTAC 3 cut(s) 15, 265, 345
CviAII CATG 5 cut(s) 85, 307, 317, 443, 576
CviQI GTAC 3 cut(s) 15, 265, 345
DdeI CTNAG 2 cut(s) 247, 382
DpnI GATC 3 cut(s) 183, 564, 632
DpnII GATC 3 cut(s) 181, 562, 630
EaeI YGGCCR 1 cut(s) 309
Ecl136II GAGCTC 2 cut(s) 63, 157
Eco105I TACGTA 1 cut(s) 418
Eco130I CCWWGG 3 cut(s) 271, 306, 442
Eco24I GRGCYC 3 cut(s) 65, 159, 279
Eco53kI GAGCTC 2 cut(s) 63, 157
EcoICRI GAGCTC 2 cut(s) 63, 157
EcoNI CCTNNNNNAGG 1 cut(s) 541
EcoO109I RGGNCCY 2 cut(s) 275, 276
EcoRII CCWGG 2 cut(s) 278, 542
EcoT14I CCWWGG 3 cut(s) 271, 306, 442
EcoT22I ATGCAT 1 cut(s) 581
EcoT38I GRGCYC 3 cut(s) 65, 159, 279
ErhI CCWWGG 3 cut(s) 271, 306, 442
FaeI CATG 5 cut(s) 88, 310, 320, 446, 579
FalI AAGNNNNNCTT 2 cut(s) 251, 283
FatI CATG 5 cut(s) 84, 306, 316, 442, 575
Fnu4HI GCNGC 2 cut(s) 376, 379
FokI GGATG 2 cut(s) 289, 459
FriOI GRGCYC 3 cut(s) 65, 159, 279
Fsp4HI GCNGC 2 cut(s) 376, 379
FspBI CTAG 3 cut(s) 126, 236, 483
GluI GCNGC 2 cut(s) 376, 379
HaeIII GGCC 4 cut(s) 277, 283, 311, 547
HgaI GACGC 1 cut(s) 20
Hin1II CATG 5 cut(s) 88, 310, 320, 446, 579
HinfI GANTC 3 cut(s) 206, 464, 637
Hpy188I TCNGA 1 cut(s) 227
Hpy188III TCNNGA 4 cut(s) 70, 317, 434, 634
HpyAV CCTTC 1 cut(s) 195
HpyCH4III ACNGT 1 cut(s) 222
HpyCH4IV ACGT 4 cut(s) 357, 417, 657, 680
HpyCH4V TGCA 7 cut(s) 337, 497, 509, 515, 521, 579, 655
HpyF3I CTNAG 2 cut(s) 247, 382
HpySE526I ACGT 4 cut(s) 357, 417, 657, 680
Hsp92II CATG 5 cut(s) 88, 310, 320, 446, 579
Kzo9I GATC 3 cut(s) 181, 562, 630
LpnPI CCDG 8 cut(s) 31, 265, 292, 325, 389, 411, 529, 556
Lsp1109I GCAGC 2 cut(s) 362, 365
LweI GCATC 1 cut(s) 324
MaeI CTAG 3 cut(s) 126, 236, 483
MaeII ACGT 4 cut(s) 357, 417, 657, 680
MaeIII GTNAC 1 cut(s) 298
MalI GATC 3 cut(s) 183, 564, 632
MboI GATC 3 cut(s) 181, 562, 630
MboII GAAGA 2 cut(s) 205, 674
MfeI CAATTG 1 cut(s) 650
MflI RGATCY 1 cut(s) 562
MhlI GDGCHC 3 cut(s) 65, 159, 279
MlsI TGGCCA 1 cut(s) 311
MluCI AATT 3 cut(s) 175, 492, 650
MluNI TGGCCA 1 cut(s) 311
MmeI TCCRAC 2 cut(s) 241, 639
MnlI CCTC 6 cut(s) 88, 196, 221, 283, 651, 654
Mox20I TGGCCA 1 cut(s) 311
Mph1103I ATGCAT 1 cut(s) 581
MroXI GAANNNNTTC 1 cut(s) 266
MscI TGGCCA 1 cut(s) 311
MseI TTAA 1 cut(s) 258
MslI CAYNNNNRTG 1 cut(s) 332
Msp20I TGGCCA 1 cut(s) 311
MspR9I CCNGG 2 cut(s) 280, 544
MunI CAATTG 1 cut(s) 650
Mva1269I GAATGC 1 cut(s) 492
MvaI CCWGG 2 cut(s) 280, 544
NcoI CCATGG 2 cut(s) 306, 442
NdeII GATC 3 cut(s) 181, 562, 630
NlaIII CATG 5 cut(s) 88, 310, 320, 446, 579
NlaIV GGNNCC 1 cut(s) 277
NsiI ATGCAT 1 cut(s) 581
NspI RCATGY 2 cut(s) 88, 579
PagI TCATGA 1 cut(s) 316
PctI GAATGC 1 cut(s) 492
PdmI GAANNNNTTC 1 cut(s) 266
PfeI GAWTC 3 cut(s) 206, 464, 637
PkrI GCNGC 2 cut(s) 377, 380
Ppu21I YACGTR 1 cut(s) 418
PsiI TTATAA 1 cut(s) 197
Psp124BI GAGCTC 2 cut(s) 65, 159
Psp1406I AACGTT 1 cut(s) 357
Psp6I CCWGG 2 cut(s) 278, 542
PspGI CCWGG 2 cut(s) 278, 542
PspN4I GGNNCC 1 cut(s) 277
PspOMI GGGCCC 1 cut(s) 275
PspPI GGNCC 3 cut(s) 275, 276, 546
PsuI RGATCY 1 cut(s) 562
RsaI GTAC 3 cut(s) 16, 266, 346
RsaNI GTAC 3 cut(s) 15, 265, 345
RseI CAYNNNNRTG 1 cut(s) 332
SacI GAGCTC 2 cut(s) 65, 159
SaqAI TTAA 1 cut(s) 258
SatI GCNGC 2 cut(s) 376, 379
Sau3AI GATC 3 cut(s) 181, 562, 630
Sau96I GGNCC 3 cut(s) 275, 276, 546
ScaI AGTACT 1 cut(s) 266
ScrFI CCNGG 2 cut(s) 280, 544
SduI GDGCHC 3 cut(s) 65, 159, 279
SetI ASST 9 cut(s) 65, 159, 232, 294, 360, 403, 420, 660, 683
SfaNI GCATC 1 cut(s) 324
SmiMI CAYNNNNRTG 1 cut(s) 332
SnaBI TACGTA 1 cut(s) 418
Sse9I AATT 3 cut(s) 175, 492, 650
SspMI CTAG 3 cut(s) 126, 236, 483
SstI GAGCTC 2 cut(s) 65, 159
StyD4I CCNGG 2 cut(s) 278, 542
StyI CCWWGG 3 cut(s) 271, 306, 442
TaaI ACNGT 1 cut(s) 222
TaiI ACGT 4 cut(s) 360, 420, 660, 683
TaqI TCGA 2 cut(s) 435, 629
TasI AATT 3 cut(s) 175, 492, 650
TatI WGTACW 1 cut(s) 264
TfiI GAWTC 3 cut(s) 206, 464, 637
Tru1I TTAA 1 cut(s) 258
Tru9I TTAA 1 cut(s) 258
TseI GCWGC 2 cut(s) 375, 378
TspDTI ATGAA 2 cut(s) 198, 545
TspGWI ACGGA 1 cut(s) 490
XagI CCTNNNNNAGG 1 cut(s) 541
XceI RCATGY 2 cut(s) 88, 579
XmnI GAANNNNTTC 1 cut(s) 266
XspI CTAG 3 cut(s) 126, 236, 483
ZrmI AGTACT 1 cut(s) 266
Zsp2I ATGCAT 1 cut(s) 581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.