AT5G07180
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
2227439 .. 2233587
6149 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G07180.1

Sequence Viewer

Length: 2904 bp
ATGAGAAGGATAGAGACCATGAAAGGCTTGTTTTTTTGTCTGGGGATGGTGGTTTTCATGCTACTTGGTTCTGTTTCTCCAATGAACAACGAAGGAAAAGCGTTGATGGCGATAAAGGCTTCATTCAGCAACGTGGCGAATATGCTTCTTGATTGGGACGATGTTCATAACCACGACTTTTGTTCTTGGAGAGGTGTCTTCTGTGATAACGTTAGCCTCAATGTTGTCTCTCTTAATCTGTCAAACCTGAATCTTGGTGGAGAGATATCATCTGCCCTTGGAGATTTGATGAATCTGCAATCAATAGACTTGCAAGGAAATAAATTGGGTGGTCAAATTCCAGATGAGATTGGAAACTGTGTTTCTCTTGCTTATGTGGATTTCTCCACCAATTTGTTGTTTGGAGACATACCGTTTTCAATCTCTAAACTCAAACAGCTGGAGTTTCTGAACCTAAAGAATAATCAGCTCACTGGTCCAATACCAGCAACCTTAACTCAGATTCCAAACCTTAAGACCCTTGACCTCGCAAGAAACCAGCTTACTGGTGAGATACCAAGGTTACTCTACTGGAATGAAGTTTTACAGTATCTCGGTTTACGTGGGAATATGTTAACTGGGACATTGTCTCCTGATATGTGTCAGCTGACGGGTCTGTGGTACTTTGATGTGAGAGGCAACAACCTTACTGGAACTATCCCAGAGAGCATTGGCAATTGCACAAGCTTTGAGATCTTGGATGTATCTTATAATCAGATTACCGGAGTTATACCCTACAATATTGGTTTCCTCCAAGTAGCTACTCTGTCACTTCAAGGAAACAAGTTGACTGGCAGAATTCCGGAAGTGATTGGTCTGATGCAGGCTCTTGCTGTATTGGATTTGAGTGACAATGAATTAACTGGGCCTATTCCACCAATACTTGGGAATCTGTCATTCACTGGAAAACTGTATCTCCATGGCAACAAGCTCACTGGACAAATCCCACCCGAGCTAGGCAATATGTCACGACTCAGCTATTTGCAACTAAATGATAATGAACTAGTGGGAAAGATCCCACCTGAGCTTGGGAAGCTGGAACAATTGTTCGAACTGAATCTTGCGAACAACAATCTTGTAGGGCTGATTCCATCTAACATTAGTTCCTGTGCTGCCTTGAATCAATTCAATGTTCATGGGAACTTCTTGAGTGGAGCTGTACCACTTGAATTCCGGAATCTTGGAAGCTTGACTTATCTAAATCTTTCCTCAAACAGTTTCAAGGGCAAAATACCTGCTGAGCTTGGCCATATCATCAATCTTGATACATTGGATCTGTCTGGCAACAATTTCTCAGGCTCAATTCCATTAACACTTGGTGATCTTGAGCATCTTCTCATCTTAAACTTGAGCAGAAATCATCTGAATGGCACATTGCCTGCAGAATTCGGGAACCTCCGAAGCATTCAGATCATCGATGTGTCATTTAATTTTCTTGCCGGTGTTATTCCAACTGAACTTGGCCAGTTGCAGAACATAAACTCTCTGATACTGAACAACAACAAGATTCATGGGAAAATCCCTGATCAGCTAACTAACTGCTTCAGTCTTGCCAATCTGAACATCTCCTTCAATAATCTTTCTGGAATAATCCCACCTATGAAGAACTTTACACGTTTTTCCCCGGCCAGCTTCTTTGGAAATCCATTTCTCTGCGGGAACTGGGTTGGATCAATCTGTGGCCCATCTTTACCTAAGTCACAAGTATTCACCAGAGTTGCCGTGATTTGTATGGTTCTCGGTTTCATCACTCTCATATGCATGATATTCATTGCGGTTTACAAGTCAAAGCAGCAGAAACCAGTCTTGAAAGGCTCTTCAAAACAACCTGAAGGGTCAACGAAGCTGGTGATTCTTCACATGGACATGGCTATTCACACGTTTGATGATATCATGAGAGTTACAGAAAACCTCGATGAGAAATACATCATTGGATACGGTGCTTCTAGCACAGTTTACAAGTGCACCTCCAAAACTTCCCGACCTATTGCCATTAAGCGAATCTACAATCAGTATCCCAGCAACTTCCGCGAGTTTGAAACAGAGCTCGAGACCATTGGGAGCATCAGACACAGAAACATAGTAAGCTTGCACGGATACGCCTTATCTCCCTTTGGCAACCTCCTCTTCTACGACTACATGGAAAATGGCTCTCTTTGGGATCTTCTCCATGGGCCTGGGAAGAAGGTGAAGCTTGACTGGGAAACAAGGCTGAAGATAGCTGTTGGAGCTGCGCAAGGACTTGCATATCTTCACCATGACTGCACACCTAGGATAATCCATCGAGACATCAAGTCATCAAACATACTCCTTGATGGGAATTTCGAAGCGCGTTTGTCAGATTTTGGGATTGCCAAGAGCATACCAGCCACCAAAACTTATGCTTCAACCTATGTTCTTGGAACCATTGGATATATTGACCCAGAGTATGCTCGAACTTCGCGTCTGAACGAGAAGTCTGATATCTACAGTTTCGGTATTGTCCTTCTTGAGCTTCTAACCGGCAAGAAGGCTGTGGATAACGAGGCCAACTTGCATCAAATGATTCTATCAAAGGCGGATGATAACACAGTAATGGAAGCTGTTGATGCAGAGGTCTCAGTGACTTGCATGGACTCAGGACACATCAAGAAAACATTTCAGCTAGCTCTCTTGTGCACCAAGCGAAATCCTTTGGAGAGACCCACCATGCAGGAGGTCTCTAGGGTTCTGCTCTCACTTGTCCCGTCTCCACCTCCAAAGAAGTTACCGTCGCCTGCAAAAGTACAGGAAGGGGAAGAACGGCGTGAGAGCCACTCTTCAGATACAACAACCCCACAGTGGTTTGTTCAGTTCCGTGAAGATATCTCCAAAAGTAGCTTATAA

Protein Analysis

967

Amino Acids

106.68

Weight (kDa)

6.28

Isoelectric Point (pI)

32.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 69 2.6e-09 Leucine rich repeat N-terminal domain
LRR_4 PF12799 145 - 182 9.4e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 331 - 440 7.1e-08 Leucine-rich repeat region
LRR_8 PF13855 433 - 490 4.8e-06 Leucine rich repeat
LRR_14 PF23598 437 - 536 1.7e-06 Leucine-rich repeat region
Pkinase PF00069 654 - 913 2.1e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 656 - 916 2.2e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000383)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07180 AT5G07180 AT5G62230 AT5G62230
fragaria_vesca FvH4_7g28290 FvH4_7g28290 FvH4_7g28290 FvH4_7g28290
malus_domestica MD02G1216900.v1.1 MD07G1259500.v1.1 MD17G1114200.v1.1 MD17G1114300.v1.1
prunus_persica Prupe.2G283600_v2.0.a1
pyrus_communis pycom05g04060 pycom07g23280 pycom15g04040
rosa_chinensis RchiOBHm_Chr1g0375261 RchiOBHm_Chr2g0167851 RchiOBHm_Chr4g0390421 RchiOBHm_Chr4g0390431 RchiOBHm_Chr4g0442901 RchiOBHm_Chr4g0442981 RchiOBHm_Chr7g0228991 RchiOBHm_Chr7g0239711
rosa_laevigata RLG00000005460 RLG00000005968 RLG00000005971 RLG00000005973 RLG00000005978 RLG00000008547 RLG00000010012 RLG00000010245 RLG00000026673 RLG00000030046 RLG00000031637
rosa_multiflora Rmu_co8166860.1_g000001 Rmu_co8410161.1_g000001 Rmu_sc0000554.1_g000034 Rmu_sc0001782.1_g000050 Rmu_sc0002096.1_g000036 Rmu_sc0003006.1_g000022 Rmu_sc0003701.1_g000003 Rmu_sc0005877.1_g000004 Rmu_sc0006329.1_g000003 Rmu_sc0006695.1_g000032 Rmu_sc0008108.1_g000003 Rmu_sc0009414.1_g000003 Rmu_sc0010356.1_g000001 Rmu_sc0014119.1_g000002 Rmu_sc0014119.1_g000003 Rmu_sc0014161.1_g000004 Rmu_sc0023009.1_g000001 Rmu_sc0036835.1_g000001 Rmu_ssc0000204.1_g000009
rosa_roxburghii Rroxscaffold_1G00024810 Rroxscaffold_2G00110800 Rroxscaffold_2G00122430 Rroxscaffold_3G00261280 Rroxscaffold_4G00282890 Rroxscaffold_4G00330910 Rroxscaffold_5G00370350 Rroxscaffold_7G00161820
rosa_rugosa Rorug01G0389600 Rorug01G0389700 Rorug01G0389800 Rorug01G0389900 Rorug01G0389900 Rorug01G0390000 Rorug04G0343700 Rorug07G0155300
rosa_samantha Rh1AG400300 Rh1CG377300 Rh1DG394700 Rh2AG367100 Rh2BG612000 Rh2CG350500 Rh2DG389600 Rh3CG058100 Rh4AG396700 Rh4AG397100 Rh4AG397500 Rh4AG397600 Rh4AG397700 Rh4BG003000 Rh4BG127700 Rh4BG370500 Rh4BG393400 Rh4BG409200 Rh4CG035400 Rh4CG166700 Rh4CG408200 Rh4CG424700 Rh4DG028000 Rh4DG028100 Rh4DG403300 Rh4DG403800 Rh6DG080900 Rh7DG202700
rosa_wichuraiana Rw1G035540 Rw4G032760 Rw4G034230 Rw4G034240 Rw4G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 750, 2902
Acc16I TGCGCA 1 cut(s) 2274
Acc36I ACCTGC 1 cut(s) 1282
AccB7I CCANNNNNTGG 1 cut(s) 923
AccII CGCG 3 cut(s) 2070, 2371, 2482
AccIII TCCGGA 2 cut(s) 841, 1212
AciI CCGC 4 cut(s) 1695, 1814, 2068, 2597
AclI AACGTT 1 cut(s) 210
AclWI GGATC 4 cut(s) 1048, 1320, 1717, 2208
AcoI YGGCCR 3 cut(s) 1285, 1501, 1665
AcsI RAATTY 5 cut(s) 336, 837, 1208, 1424, 2359
AcuI CTGAAG 4 cut(s) 1567, 1890, 2273, 2823
AdeI CACNNNGTG 1 cut(s) 1358
AfaI GTAC 3 cut(s) 662, 1200, 2805
AfiI CCNNNNNNNGG 4 cut(s) 923, 995, 1067, 2859
AflII CTTAAG 1 cut(s) 512
AflIII ACRYGT 2 cut(s) 1652, 1917
AhdI GACNNNNNGTC 1 cut(s) 2332
AhlI ACTAGT 1 cut(s) 1042
AjnI CCWGG 1 cut(s) 2215
AloI GAACNNNNNNTCC 2 cut(s) 1070, 1102
Alw21I GWGCWC 3 cut(s) 2006, 2088, 2699
Alw44I GTGCAC 2 cut(s) 2002, 2695
AlwI GGATC 4 cut(s) 1048, 1320, 1717, 2208
Ama87I CYCGRG 2 cut(s) 989, 2087
Aor13HI TCCGGA 2 cut(s) 841, 1212
AoxI GGCC 7 cut(s) 905, 1285, 1501, 1665, 1720, 2213, 2565
ApaLI GTGCAC 2 cut(s) 2002, 2695
ApeKI GCWGC 3 cut(s) 1151, 1831, 2270
ApoI RAATTY 5 cut(s) 336, 837, 1208, 1424, 2359
ArsI GACNNNNNNTTYG 2 cut(s) 2467, 2499
Asp700I GAANNNNTTC 1 cut(s) 1163
AspA2I CCTAGG 1 cut(s) 2309
AspLEI GCGC 2 cut(s) 2275, 2371
AspS9I GGNCC 4 cut(s) 476, 905, 1721, 2213
AsuC2I CCSGG 1 cut(s) 1664
AsuHPI GGTGA 6 cut(s) 560, 1370, 1741, 1900, 2239, 2285
AsuII TTCGAA 2 cut(s) 1089, 2364
AsuNHI GCTAGC 1 cut(s) 2683
AvaI CYCGRG 2 cut(s) 989, 2087
AvaII GGWCC 1 cut(s) 476
AvrII CCTAGG 1 cut(s) 2309
BaeGI GKGCMC 2 cut(s) 2006, 2699
BaeI ACNNNNGTAYC 2 cut(s) 545, 578
BalI TGGCCA 2 cut(s) 1287, 1503
BanII GRGCYC 1 cut(s) 2088
BbsI GAAGAC 1 cut(s) 190
Bbv12I GWGCWC 3 cut(s) 2006, 2088, 2699
BbvI GCAGC 3 cut(s) 1138, 1843, 2257
BccI CCATC 6 cut(s) 40, 100, 1138, 1732, 2328, 2348
BceAI ACGGC 2 cut(s) 1745, 2837
BciT130I CCWGG 1 cut(s) 2217
BciVI GTATCC 3 cut(s) 1967, 2064, 2129
BclI TGATCA 1 cut(s) 1564
BcnI CCSGG 1 cut(s) 1664
BcuI ACTAGT 1 cut(s) 1042
BfaI CTAG 6 cut(s) 995, 1043, 1986, 2310, 2684, 2742
BfmI CTRYAG 2 cut(s) 1419, 2506
BfrI CTTAAG 1 cut(s) 512
BfuAI ACCTGC 1 cut(s) 1282
BfuI GTATCC 3 cut(s) 1967, 2064, 2129
BglII AGATCT 1 cut(s) 732
BisI GCNGC 3 cut(s) 1152, 1832, 2271
BlnI CCTAGG 1 cut(s) 2309
BlpI GCTNAGC 1 cut(s) 1278
BlsI GCNGC 3 cut(s) 1153, 1833, 2272
Bme1390I CCNGG 2 cut(s) 1664, 2217
Bme18I GGWCC 1 cut(s) 476
BmeRI GACNNNNNGTC 1 cut(s) 2332
BmeT110I CYCGRG 2 cut(s) 989, 2087
BmgT120I GGNCC 4 cut(s) 476, 905, 1721, 2213
BmiI GGNNCC 2 cut(s) 1433, 2443
BmrFI CCNGG 2 cut(s) 1664, 2217
BmrI ACTGGG 4 cut(s) 627, 912, 1711, 2248
BmsI GCATC 5 cut(s) 849, 1378, 2112, 2584, 2617
BmtI GCTAGC 1 cut(s) 2687
BmuI ACTGGG 4 cut(s) 627, 912, 1711, 2248
BpiI GAAGAC 1 cut(s) 190
BplI GAGNNNNNCTC 2 cut(s) 2819, 2851
BpmI CTGGAG 1 cut(s) 461
Bpu10I CCTNAGC 1 cut(s) 1062
Bpu1102I GCTNAGC 1 cut(s) 1278
Bpu14I TTCGAA 2 cut(s) 1089, 2364
BpuEI CTTGAG 4 cut(s) 1207, 1385, 1408, 2549
BpuMI CCSGG 1 cut(s) 1664
Bsa29I ATCGAT 1 cut(s) 1455
BsaAI YACGTR 1 cut(s) 602
BsaI GGTCTC 5 cut(s) 8, 2084, 2641, 2713, 2743
BsaJI CCNNGG 7 cut(s) 277, 557, 958, 1662, 2209, 2216, 2309
BsaWI WCCGGW 3 cut(s) 761, 841, 1212
BsaXI ACNNNNNCTCC 4 cut(s) 613, 643, 939, 969
Bsc4I CCNNNNNNNGG 4 cut(s) 923, 995, 1067, 2859
Bse118I RCCGGY 2 cut(s) 1478, 2540
Bse3DI GCAATG 2 cut(s) 1412, 1809
BseAI TCCGGA 2 cut(s) 841, 1212
BseBI CCWGG 1 cut(s) 2217
BseCI ATCGAT 1 cut(s) 1455
BseDI CCNNGG 7 cut(s) 277, 557, 958, 1662, 2209, 2216, 2309
BseGI GGATG 3 cut(s) 51, 745, 2605
BseLI CCNNNNNNNGG 4 cut(s) 923, 995, 1067, 2859
BseMI GCAATG 2 cut(s) 1412, 1809
BseMII CTCAG 7 cut(s) 512, 1027, 1053, 1269, 1347, 2652, 2670
BseRI GAGGAG 1 cut(s) 2153
BseSI GKGCMC 2 cut(s) 2006, 2699
BseXI GCAGC 3 cut(s) 1138, 1843, 2257
BseYI CCCAGC 1 cut(s) 2057
BsgI GTGCAG 1 cut(s) 2287
Bsh1236I CGCG 3 cut(s) 2070, 2371, 2482
BshFI GGCC 7 cut(s) 907, 1287, 1503, 1667, 1722, 2215, 2567
BshVI ATCGAT 1 cut(s) 1455
BsiHKAI GWGCWC 3 cut(s) 2006, 2088, 2699
BsiHKCI CYCGRG 2 cut(s) 989, 2087
BsiSI CCGG 6 cut(s) 762, 842, 1213, 1479, 1664, 2541
BslFI GGGAC 3 cut(s) 170, 634, 2747
BslI CCNNNNNNNGG 4 cut(s) 923, 995, 1067, 2859
BsmBI CGTCTC 1 cut(s) 2772
BsmFI GGGAC 3 cut(s) 170, 634, 2747
BsmI GAATGC 1 cut(s) 1443
BsnI GGCC 7 cut(s) 907, 1287, 1503, 1667, 1722, 2215, 2567
Bso31I GGTCTC 5 cut(s) 8, 2084, 2641, 2713, 2743
BsoBI CYCGRG 2 cut(s) 989, 2087
Bsp119I TTCGAA 2 cut(s) 1089, 2364
Bsp1286I GDGCHC 3 cut(s) 2006, 2088, 2699
Bsp13I TCCGGA 2 cut(s) 841, 1212
Bsp143I GATC 8 cut(s) 732, 1053, 1312, 1360, 1449, 1564, 1709, 2200
Bsp1720I GCTNAGC 1 cut(s) 1278
Bsp19I CCATGG 2 cut(s) 958, 2209
BspACI CCGC 4 cut(s) 1695, 1814, 2068, 2597
BspANI GGCC 7 cut(s) 907, 1287, 1503, 1667, 1722, 2215, 2567
BspCNI CTCAG 7 cut(s) 511, 1026, 1054, 1270, 1346, 2651, 2669
BspDI ATCGAT 1 cut(s) 1455
BspEI TCCGGA 2 cut(s) 841, 1212
BspFNI CGCG 3 cut(s) 2070, 2371, 2482
BspHI TCATGA 1 cut(s) 1932
BspLI GGNNCC 2 cut(s) 1433, 2443
BspMAI CTGCAG 1 cut(s) 1423
BspMI ACCTGC 1 cut(s) 1282
BspOI GCTAGC 1 cut(s) 2687
BspPI GGATC 4 cut(s) 1048, 1320, 1717, 2208
BspQI GCTCTTC 1 cut(s) 1861
BspT104I TTCGAA 2 cut(s) 1089, 2364
BspTI CTTAAG 1 cut(s) 512
BspTNI GGTCTC 5 cut(s) 8, 2084, 2641, 2713, 2743
BsrDI GCAATG 2 cut(s) 1412, 1809
BsrFI RCCGGY 2 cut(s) 1478, 2540
BssAI RCCGGY 2 cut(s) 1478, 2540
BssECI CCNNGG 7 cut(s) 277, 557, 958, 1662, 2209, 2216, 2309
BssMI GATC 8 cut(s) 732, 1053, 1312, 1360, 1449, 1564, 1709, 2200
BssT1I CCWWGG 5 cut(s) 277, 557, 958, 2209, 2309
Bst2UI CCWGG 1 cut(s) 2217
Bst6I CTCTTC 3 cut(s) 1861, 2171, 2842
BstAFI CTTAAG 1 cut(s) 512
BstBAI YACGTR 1 cut(s) 602
BstBI TTCGAA 2 cut(s) 1089, 2364
BstC8I GCNNGC 6 cut(s) 864, 1419, 1669, 2129, 2685, 2796
BstDEI CTNAG 8 cut(s) 498, 1013, 1062, 1278, 1333, 1734, 2638, 2656
BstDSI CCRYGG 2 cut(s) 958, 2209
BstF5I GGATG 3 cut(s) 51, 745, 2605
BstFNI CGCG 3 cut(s) 2070, 2371, 2482
BstHHI GCGC 2 cut(s) 2275, 2371
BstKTI GATC 8 cut(s) 735, 1056, 1315, 1363, 1452, 1567, 1712, 2203
BstMBI GATC 8 cut(s) 732, 1053, 1312, 1360, 1449, 1564, 1709, 2200
BstMWI GCNNNNNNNGC 6 cut(s) 107, 116, 1072, 2067, 2267, 2627
BstNI CCWGG 1 cut(s) 2217
BstSCI CCNGG 2 cut(s) 1662, 2215
BstSFI CTRYAG 2 cut(s) 1419, 2506
BstSLI GKGCMC 2 cut(s) 2006, 2699
BstUI CGCG 3 cut(s) 2070, 2371, 2482
BstV1I GCAGC 3 cut(s) 1138, 1843, 2257
BstV2I GAAGAC 1 cut(s) 190
BstX2I RGATCY 4 cut(s) 732, 1053, 1312, 2200
BstXI CCANNNNNNTGG 2 cut(s) 545, 2216
BstYI RGATCY 4 cut(s) 732, 1053, 1312, 2200
Bsu15I ATCGAT 1 cut(s) 1455
BsuI GTATCC 3 cut(s) 1967, 2064, 2129
BsuRI GGCC 7 cut(s) 907, 1287, 1503, 1667, 1722, 2215, 2567
BsuTUI ATCGAT 1 cut(s) 1455
BtgI CCRYGG 2 cut(s) 958, 2209
BtsCI GGATG 3 cut(s) 51, 745, 2605
BtsIMutI CAGTG 5 cut(s) 471, 939, 972, 2646, 2864
BveI ACCTGC 1 cut(s) 1282
Cac8I GCNNGC 6 cut(s) 864, 1419, 1669, 2129, 2685, 2796
CciI TCATGA 1 cut(s) 1932
CfoI GCGC 2 cut(s) 2275, 2371
Cfr10I RCCGGY 2 cut(s) 1478, 2540
Cfr13I GGNCC 4 cut(s) 476, 905, 1721, 2213
ClaI ATCGAT 1 cut(s) 1455
CseI GACGC 1 cut(s) 2471
Csp6I GTAC 3 cut(s) 661, 1199, 2804
CspCI CAANNNNNGTGG 2 cut(s) 161, 196
CviQI GTAC 3 cut(s) 661, 1199, 2804
DdeI CTNAG 8 cut(s) 498, 1013, 1062, 1278, 1333, 1734, 2638, 2656
DpnI GATC 8 cut(s) 734, 1055, 1314, 1362, 1451, 1566, 1711, 2202
DpnII GATC 8 cut(s) 732, 1053, 1312, 1360, 1449, 1564, 1709, 2200
DraIII CACNNNGTG 1 cut(s) 1358
DriI GACNNNNNGTC 1 cut(s) 2332
EaeI YGGCCR 3 cut(s) 1285, 1501, 1665
Eam1104I CTCTTC 3 cut(s) 1861, 2171, 2842
Eam1105I GACNNNNNGTC 1 cut(s) 2332
EarI CTCTTC 3 cut(s) 1861, 2171, 2842
EciI GGCGGA 1 cut(s) 2612
Ecl136II GAGCTC 1 cut(s) 2086
Eco130I CCWWGG 5 cut(s) 277, 557, 958, 2209, 2309
Eco24I GRGCYC 1 cut(s) 2088
Eco31I GGTCTC 5 cut(s) 8, 2084, 2641, 2713, 2743
Eco32I GATATC 4 cut(s) 267, 1930, 2503, 2884
Eco47I GGWCC 1 cut(s) 476
Eco53kI GAGCTC 1 cut(s) 2086
Eco57I CTGAAG 4 cut(s) 1567, 1890, 2273, 2823
Eco88I CYCGRG 2 cut(s) 989, 2087
EcoICRI GAGCTC 1 cut(s) 2086
EcoRI GAATTC 3 cut(s) 837, 1208, 1424
EcoRII CCWGG 1 cut(s) 2215
EcoRV GATATC 4 cut(s) 267, 1930, 2503, 2884
EcoT14I CCWWGG 5 cut(s) 277, 557, 958, 2209, 2309
EcoT22I ATGCAT 1 cut(s) 1802
EcoT38I GRGCYC 1 cut(s) 2088
ErhI CCWWGG 5 cut(s) 277, 557, 958, 2209, 2309
Esp3I CGTCTC 1 cut(s) 2772
FalI AAGNNNNNCTT 2 cut(s) 1216, 1248
FaqI GGGAC 3 cut(s) 170, 634, 2747
FauI CCCGC 1 cut(s) 1688
FauNDI CATATG 1 cut(s) 1796
FbaI TGATCA 1 cut(s) 1564
Fnu4HI GCNGC 3 cut(s) 1152, 1832, 2271
FokI GGATG 3 cut(s) 58, 752, 2612
FriOI GRGCYC 1 cut(s) 2088
Fsp4HI GCNGC 3 cut(s) 1152, 1832, 2271
FspBI CTAG 6 cut(s) 995, 1043, 1986, 2310, 2684, 2742
FspI TGCGCA 1 cut(s) 2274
GlaI GCGC 2 cut(s) 2274, 2370
GluI GCNGC 3 cut(s) 1152, 1832, 2271
GsaI CCCAGC 1 cut(s) 2061
GsuI CTGGAG 1 cut(s) 461
HaeIII GGCC 7 cut(s) 907, 1287, 1503, 1667, 1722, 2215, 2567
HapII CCGG 6 cut(s) 762, 842, 1213, 1479, 1664, 2541
HgaI GACGC 1 cut(s) 2471
HhaI GCGC 2 cut(s) 2275, 2371
Hin6I GCGC 2 cut(s) 2273, 2369
HinP1I GCGC 2 cut(s) 2273, 2369
HincII GTYRAC 3 cut(s) 615, 828, 1878
HindII GTYRAC 3 cut(s) 615, 828, 1878
HindIII AAGCTT 4 cut(s) 724, 1225, 2125, 2231
HpaI GTTAAC 1 cut(s) 615
HpaII CCGG 6 cut(s) 762, 842, 1213, 1479, 1664, 2541
HphI GGTGA 6 cut(s) 560, 1370, 1741, 1900, 2239, 2285
Hpy166II GTNNAC 8 cut(s) 599, 615, 828, 1819, 1878, 1996, 2004, 2697
Hpy8I GTNNAC 8 cut(s) 599, 615, 828, 1819, 1878, 1996, 2004, 2697
Hpy99I CGWCG 1 cut(s) 2794
HpyAV CCTTC 7 cut(s) 86, 1618, 1865, 2218, 2534, 2542, 2804
HpyCH4IV ACGT 5 cut(s) 132, 210, 601, 1654, 1919
HpyF10VI GCNNNNNNNGC 6 cut(s) 107, 116, 1072, 2067, 2267, 2627
HpyF3I CTNAG 8 cut(s) 498, 1013, 1062, 1278, 1333, 1734, 2638, 2656
HpySE526I ACGT 5 cut(s) 132, 210, 601, 1654, 1919
HspAI GCGC 2 cut(s) 2273, 2369
Kpn2I TCCGGA 2 cut(s) 841, 1212
Ksp22I TGATCA 1 cut(s) 1564
KspAI GTTAAC 1 cut(s) 615
Kzo9I GATC 8 cut(s) 732, 1053, 1312, 1360, 1449, 1564, 1709, 2200
LguI GCTCTTC 1 cut(s) 1861
LmnI GCTCC 3 cut(s) 1193, 2100, 2267
Lsp1109I GCAGC 3 cut(s) 1138, 1843, 2257
LweI GCATC 5 cut(s) 849, 1378, 2112, 2584, 2617
MaeI CTAG 6 cut(s) 995, 1043, 1986, 2310, 2684, 2742
MaeII ACGT 5 cut(s) 132, 210, 601, 1654, 1919
MaeIII GTNAC 8 cut(s) 561, 807, 887, 1005, 1737, 1939, 2641, 2784
MalI GATC 8 cut(s) 734, 1055, 1314, 1362, 1451, 1566, 1711, 2202
MboI GATC 8 cut(s) 732, 1053, 1312, 1360, 1449, 1564, 1709, 2200
MfeI CAATTG 2 cut(s) 715, 1082
MflI RGATCY 4 cut(s) 732, 1053, 1312, 2200
MhlI GDGCHC 3 cut(s) 2006, 2088, 2699
MlsI TGGCCA 2 cut(s) 1287, 1503
MluNI TGGCCA 2 cut(s) 1287, 1503
MlyI GAGTC 2 cut(s) 1005, 2648
MmeI TCCRAC 3 cut(s) 1514, 1687, 2245
Mox20I TGGCCA 2 cut(s) 1287, 1503
Mph1103I ATGCAT 1 cut(s) 1802
MroI TCCGGA 2 cut(s) 841, 1212
MroXI GAANNNNTTC 1 cut(s) 1163
MscI TGGCCA 2 cut(s) 1287, 1503
MseI TTAA 9 cut(s) 234, 494, 513, 614, 899, 1349, 1382, 1467, 2034
MslI CAYNNNNRTG 5 cut(s) 1404, 1457, 1799, 1904, 2612
Msp20I TGGCCA 2 cut(s) 1287, 1503
MspA1I CMGCKG 2 cut(s) 439, 646
MspCI CTTAAG 1 cut(s) 512
MspI CCGG 6 cut(s) 762, 842, 1213, 1479, 1664, 2541
MspR9I CCNGG 2 cut(s) 1664, 2217
MunI CAATTG 2 cut(s) 715, 1082
Mva1269I GAATGC 1 cut(s) 1443
MvaI CCWGG 1 cut(s) 2217
MvnI CGCG 3 cut(s) 2070, 2371, 2482
MwoI GCNNNNNNNGC 6 cut(s) 107, 116, 1072, 2067, 2267, 2627
NciI CCSGG 1 cut(s) 1664
NcoI CCATGG 2 cut(s) 958, 2209
NdeI CATATG 1 cut(s) 1796
NdeII GATC 8 cut(s) 732, 1053, 1312, 1360, 1449, 1564, 1709, 2200
NheI GCTAGC 1 cut(s) 2683
NlaIV GGNNCC 2 cut(s) 1433, 2443
NmuCI GTSAC 5 cut(s) 807, 887, 1005, 1737, 2641
NsbI TGCGCA 1 cut(s) 2274
NsiI ATGCAT 1 cut(s) 1802
NspV TTCGAA 2 cut(s) 1089, 2364
PaeR7I CTCGAG 1 cut(s) 2087
PagI TCATGA 1 cut(s) 1932
PciSI GCTCTTC 1 cut(s) 1861
PcsI WCGNNNNNNNCGW 1 cut(s) 2479
PctI GAATGC 1 cut(s) 1443
PdmI GAANNNNTTC 1 cut(s) 1163
PflFI GACNNNGTC 1 cut(s) 625
PflMI CCANNNNNTGG 1 cut(s) 923
PkrI GCNGC 3 cut(s) 1153, 1833, 2272
PleI GAGTC 2 cut(s) 1005, 2648
PpsI GAGTC 2 cut(s) 1005, 2648
Ppu21I YACGTR 1 cut(s) 602
PsiI TTATAA 2 cut(s) 750, 2902
Psp124BI GAGCTC 1 cut(s) 2088
Psp1406I AACGTT 1 cut(s) 210
Psp6I CCWGG 1 cut(s) 2215
PspFI CCCAGC 1 cut(s) 2057
PspGI CCWGG 1 cut(s) 2215
PspN4I GGNNCC 2 cut(s) 1433, 2443
PspPI GGNCC 4 cut(s) 476, 905, 1721, 2213
PstI CTGCAG 1 cut(s) 1423
PsuI RGATCY 4 cut(s) 732, 1053, 1312, 2200
PsyI GACNNNGTC 1 cut(s) 625
PvuII CAGCTG 2 cut(s) 439, 646
RsaI GTAC 3 cut(s) 662, 1200, 2805
RsaNI GTAC 3 cut(s) 661, 1199, 2804
RseI CAYNNNNRTG 5 cut(s) 1404, 1457, 1799, 1904, 2612
SacI GAGCTC 1 cut(s) 2088
SapI GCTCTTC 1 cut(s) 1861
SaqAI TTAA 9 cut(s) 234, 494, 513, 614, 899, 1349, 1382, 1467, 2034
SatI GCNGC 3 cut(s) 1152, 1832, 2271
Sau3AI GATC 8 cut(s) 732, 1053, 1312, 1360, 1449, 1564, 1709, 2200
Sau96I GGNCC 4 cut(s) 476, 905, 1721, 2213
SchI GAGTC 2 cut(s) 1005, 2648
ScrFI CCNGG 2 cut(s) 1664, 2217
SduI GDGCHC 3 cut(s) 2006, 2088, 2699
SfaNI GCATC 5 cut(s) 849, 1378, 2112, 2584, 2617
SfcI CTRYAG 2 cut(s) 1419, 2506
Sfr274I CTCGAG 1 cut(s) 2087
SfuI TTCGAA 2 cut(s) 1089, 2364
SinI GGWCC 1 cut(s) 476
SlaI CTCGAG 1 cut(s) 2087
SmiMI CAYNNNNRTG 5 cut(s) 1404, 1457, 1799, 1904, 2612
SmlI CTYRAG 6 cut(s) 512, 1186, 1364, 1387, 2087, 2528
SmoI CTYRAG 6 cut(s) 512, 1186, 1364, 1387, 2087, 2528
SpeI ACTAGT 1 cut(s) 1042
SsiI CCGC 4 cut(s) 1695, 1814, 2068, 2597
SspI AATATT 1 cut(s) 781
SspMI CTAG 6 cut(s) 995, 1043, 1986, 2310, 2684, 2742
SstI GAGCTC 1 cut(s) 2088
StyD4I CCNGG 2 cut(s) 1662, 2215
StyI CCWWGG 5 cut(s) 277, 557, 958, 2209, 2309
TaiI ACGT 5 cut(s) 135, 213, 604, 1657, 1922
TaqI TCGA 7 cut(s) 1089, 1455, 1953, 2088, 2323, 2364, 2473
TatI WGTACW 1 cut(s) 2803
Tru1I TTAA 9 cut(s) 234, 494, 513, 614, 899, 1349, 1382, 1467, 2034
Tru9I TTAA 9 cut(s) 234, 494, 513, 614, 899, 1349, 1382, 1467, 2034
TscAI CASTG 5 cut(s) 478, 946, 979, 2646, 2864
TseFI GTSAC 5 cut(s) 807, 887, 1005, 1737, 2641
TseI GCWGC 3 cut(s) 1151, 1831, 2270
Tsp45I GTSAC 5 cut(s) 807, 887, 1005, 1737, 2641
TspGWI ACGGA 2 cut(s) 2148, 2864
TspRI CASTG 5 cut(s) 478, 946, 979, 2646, 2864
Tth111I GACNNNGTC 1 cut(s) 625
Van91I CCANNNNNTGG 1 cut(s) 923
Vha464I CTTAAG 1 cut(s) 512
VneI GTGCAC 2 cut(s) 2002, 2695
VpaK11BI GGWCC 1 cut(s) 476
XapI RAATTY 5 cut(s) 336, 837, 1208, 1424, 2359
XhoI CTCGAG 1 cut(s) 2087
XmaJI CCTAGG 1 cut(s) 2309
XmnI GAANNNNTTC 1 cut(s) 1163
XspI CTAG 6 cut(s) 995, 1043, 1986, 2310, 2684, 2742
Zsp2I ATGCAT 1 cut(s) 1802
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.