Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1073 |
| AatII | GACGTC | 1 cut(s) | 1077 |
| Acc16I | TGCGCA | 1 cut(s) | 983 |
| AccII | CGCG | 1 cut(s) | 372 |
| AciI | CCGC | 3 cut(s) | 344, 521, 848 |
| AcoI | YGGCCR | 2 cut(s) | 261, 709 |
| AcsI | RAATTY | 3 cut(s) | 488, 651, 966 |
| AcuI | CTGAAG | 1 cut(s) | 151 |
| AcyI | GRCGYC | 1 cut(s) | 1074 |
| AfaI | GTAC | 4 cut(s) | 94, 429, 559, 976 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 82 |
| AgsI | TTSAA | 6 cut(s) | 227, 507, 755, 778, 1019, 1048 |
| AjnI | CCWGG | 1 cut(s) | 267 |
| AluBI | AGCT | 2 cut(s) | 171, 283 |
| AluI | AGCT | 2 cut(s) | 171, 283 |
| Alw21I | GWGCWC | 1 cut(s) | 537 |
| Alw26I | GTCTC | 4 cut(s) | 2, 32, 92, 122 |
| Ama87I | CYCGRG | 1 cut(s) | 610 |
| AoxI | GGCC | 6 cut(s) | 69, 261, 709, 730, 798, 874 |
| ApeKI | GCWGC | 2 cut(s) | 541, 851 |
| ApoI | RAATTY | 3 cut(s) | 488, 651, 966 |
| AspLEI | GCGC | 1 cut(s) | 984 |
| AspS9I | GGNCC | 1 cut(s) | 117 |
| AsuC2I | CCSGG | 1 cut(s) | 114 |
| AsuHPI | GGTGA | 3 cut(s) | 555, 806, 877 |
| AvaI | CYCGRG | 1 cut(s) | 610 |
| AvaII | GGWCC | 1 cut(s) | 117 |
| AxyI | CCTNAGG | 2 cut(s) | 291, 327 |
| BalI | TGGCCA | 1 cut(s) | 263 |
| Bbv12I | GWGCWC | 1 cut(s) | 537 |
| BbvI | GCAGC | 2 cut(s) | 553, 838 |
| BccI | CCATC | 7 cut(s) | 182, 239, 715, 761, 821, 889, 893 |
| BceAI | ACGGC | 2 cut(s) | 681, 696 |
| BciT130I | CCWGG | 1 cut(s) | 269 |
| BcnI | CCSGG | 1 cut(s) | 114 |
| BcoDI | GTCTC | 4 cut(s) | 2, 32, 92, 122 |
| BfmI | CTRYAG | 1 cut(s) | 150 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 269 |
| BglII | AGATCT | 1 cut(s) | 602 |
| BisI | GCNGC | 3 cut(s) | 542, 849, 852 |
| BlsI | GCNGC | 3 cut(s) | 543, 850, 853 |
| Bme1390I | CCNGG | 2 cut(s) | 114, 269 |
| Bme18I | GGWCC | 1 cut(s) | 117 |
| BmeT110I | CYCGRG | 1 cut(s) | 610 |
| BmgT120I | GGNCC | 1 cut(s) | 117 |
| BmiI | GGNNCC | 2 cut(s) | 21, 118 |
| BmrFI | CCNGG | 2 cut(s) | 114, 269 |
| BmsI | GCATC | 1 cut(s) | 835 |
| BoxI | GACNNNNGTC | 1 cut(s) | 104 |
| BpmI | CTGGAG | 1 cut(s) | 468 |
| BpuEI | CTTGAG | 2 cut(s) | 305, 406 |
| BpuMI | CCSGG | 1 cut(s) | 114 |
| BsaHI | GRCGYC | 1 cut(s) | 1074 |
| BsaI | GGTCTC | 2 cut(s) | 32, 122 |
| BsaJI | CCNNGG | 4 cut(s) | 113, 431, 551, 611 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 82 |
| Bse118I | RCCGGY | 1 cut(s) | 537 |
| Bse21I | CCTNAGG | 2 cut(s) | 291, 327 |
| BseBI | CCWGG | 1 cut(s) | 269 |
| BseDI | CCNNGG | 4 cut(s) | 113, 431, 551, 611 |
| BseGI | GGATG | 3 cut(s) | 832, 904, 999 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 82 |
| BseMII | CTCAG | 5 cut(s) | 282, 293, 318, 410, 885 |
| BseRI | GAGGAG | 2 cut(s) | 628, 941 |
| BseXI | GCAGC | 2 cut(s) | 553, 838 |
| Bsh1236I | CGCG | 1 cut(s) | 372 |
| Bsh1285I | CGRYCG | 1 cut(s) | 315 |
| BshFI | GGCC | 6 cut(s) | 71, 263, 711, 732, 800, 876 |
| BsiEI | CGRYCG | 1 cut(s) | 315 |
| BsiHKAI | GWGCWC | 1 cut(s) | 537 |
| BsiHKCI | CYCGRG | 1 cut(s) | 610 |
| BsiSI | CCGG | 4 cut(s) | 23, 83, 113, 538 |
| BslFI | GGGAC | 4 cut(s) | 130, 479, 605, 1020 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 82 |
| BsmAI | GTCTC | 4 cut(s) | 2, 32, 92, 122 |
| BsmBI | CGTCTC | 1 cut(s) | 2 |
| BsmFI | GGGAC | 4 cut(s) | 130, 479, 605, 1020 |
| BsnI | GGCC | 6 cut(s) | 71, 263, 711, 732, 800, 876 |
| Bso31I | GGTCTC | 2 cut(s) | 32, 122 |
| BsoBI | CYCGRG | 1 cut(s) | 610 |
| Bsp1286I | GDGCHC | 1 cut(s) | 537 |
| Bsp143I | GATC | 4 cut(s) | 367, 602, 619, 867 |
| Bsp68I | TCGCGA | 1 cut(s) | 372 |
| BspACI | CCGC | 3 cut(s) | 344, 521, 848 |
| BspANI | GGCC | 6 cut(s) | 71, 263, 711, 732, 800, 876 |
| BspCNI | CTCAG | 5 cut(s) | 283, 292, 319, 409, 884 |
| BspFNI | CGCG | 1 cut(s) | 372 |
| BspLI | GGNNCC | 2 cut(s) | 21, 118 |
| BspTNI | GGTCTC | 2 cut(s) | 32, 122 |
| BsrFI | RCCGGY | 1 cut(s) | 537 |
| BssAI | RCCGGY | 1 cut(s) | 537 |
| BssECI | CCNNGG | 4 cut(s) | 113, 431, 551, 611 |
| BssMI | GATC | 4 cut(s) | 367, 602, 619, 867 |
| BssNI | GRCGYC | 1 cut(s) | 1074 |
| BssT1I | CCWWGG | 1 cut(s) | 551 |
| Bst2UI | CCWGG | 1 cut(s) | 269 |
| Bst4CI | ACNGT | 3 cut(s) | 92, 979, 1070 |
| Bst6I | CTCTTC | 2 cut(s) | 505, 648 |
| BstACI | GRCGYC | 1 cut(s) | 1074 |
| BstC8I | GCNNGC | 2 cut(s) | 348, 911 |
| BstDEI | CTNAG | 5 cut(s) | 279, 291, 327, 396, 871 |
| BstF5I | GGATG | 3 cut(s) | 832, 904, 999 |
| BstFNI | CGCG | 1 cut(s) | 372 |
| BstHHI | GCGC | 1 cut(s) | 984 |
| BstKTI | GATC | 4 cut(s) | 370, 605, 622, 870 |
| BstMAI | GTCTC | 4 cut(s) | 2, 32, 92, 122 |
| BstMBI | GATC | 4 cut(s) | 367, 602, 619, 867 |
| BstMCI | CGRYCG | 1 cut(s) | 315 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 152, 269, 541, 945 |
| BstNI | CCWGG | 1 cut(s) | 269 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 104 |
| BstSCI | CCNGG | 2 cut(s) | 112, 267 |
| BstSFI | CTRYAG | 1 cut(s) | 150 |
| BstUI | CGCG | 1 cut(s) | 372 |
| BstV1I | GCAGC | 2 cut(s) | 553, 838 |
| BstX2I | RGATCY | 1 cut(s) | 602 |
| BstYI | RGATCY | 1 cut(s) | 602 |
| Bsu36I | CCTNAGG | 2 cut(s) | 291, 327 |
| BsuRI | GGCC | 6 cut(s) | 71, 263, 711, 732, 800, 876 |
| BtsCI | GGATG | 3 cut(s) | 832, 904, 999 |
| BtsIMutI | CAGTG | 1 cut(s) | 629 |
| BtuMI | TCGCGA | 1 cut(s) | 372 |
| Cac8I | GCNNGC | 2 cut(s) | 348, 911 |
| CfoI | GCGC | 1 cut(s) | 984 |
| Cfr10I | RCCGGY | 1 cut(s) | 537 |
| Cfr13I | GGNCC | 1 cut(s) | 117 |
| CseI | GACGC | 1 cut(s) | 586 |
| Csp6I | GTAC | 4 cut(s) | 93, 428, 558, 975 |
| CviAII | CATG | 6 cut(s) | 595, 667, 802, 914, 972, 1012 |
| CviQI | GTAC | 4 cut(s) | 93, 428, 558, 975 |
| DdeI | CTNAG | 5 cut(s) | 279, 291, 327, 396, 871 |
| DpnI | GATC | 4 cut(s) | 369, 604, 621, 869 |
| DpnII | GATC | 4 cut(s) | 367, 602, 619, 867 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1073 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1073 |
| EaeI | YGGCCR | 2 cut(s) | 261, 709 |
| Eam1104I | CTCTTC | 2 cut(s) | 505, 648 |
| EarI | CTCTTC | 2 cut(s) | 505, 648 |
| EciI | GGCGGA | 1 cut(s) | 333 |
| Eco130I | CCWWGG | 1 cut(s) | 551 |
| Eco147I | AGGCCT | 1 cut(s) | 876 |
| Eco31I | GGTCTC | 2 cut(s) | 32, 122 |
| Eco47I | GGWCC | 1 cut(s) | 117 |
| Eco57I | CTGAAG | 1 cut(s) | 151 |
| Eco81I | CCTNAGG | 2 cut(s) | 291, 327 |
| Eco88I | CYCGRG | 1 cut(s) | 610 |
| EcoRI | GAATTC | 1 cut(s) | 488 |
| EcoRII | CCWGG | 1 cut(s) | 267 |
| EcoT14I | CCWWGG | 1 cut(s) | 551 |
| ErhI | CCWWGG | 1 cut(s) | 551 |
| Esp3I | CGTCTC | 1 cut(s) | 2 |
| FaeI | CATG | 6 cut(s) | 598, 670, 805, 917, 975, 1015 |
| FaqI | GGGAC | 4 cut(s) | 130, 479, 605, 1020 |
| FatI | CATG | 6 cut(s) | 594, 666, 801, 913, 971, 1011 |
| FauI | CCCGC | 1 cut(s) | 528 |
| FauNDI | CATATG | 2 cut(s) | 810, 856 |
| Fnu4HI | GCNGC | 3 cut(s) | 542, 849, 852 |
| FokI | GGATG | 3 cut(s) | 839, 911, 1006 |
| Fsp4HI | GCNGC | 3 cut(s) | 542, 849, 852 |
| FspAI | RTGCGCAY | 1 cut(s) | 983 |
| FspI | TGCGCA | 1 cut(s) | 983 |
| GlaI | GCGC | 1 cut(s) | 983 |
| GluI | GCNGC | 3 cut(s) | 542, 849, 852 |
| GsuI | CTGGAG | 1 cut(s) | 468 |
| HaeIII | GGCC | 6 cut(s) | 71, 263, 711, 732, 800, 876 |
| HapII | CCGG | 4 cut(s) | 23, 83, 113, 538 |
| HgaI | GACGC | 1 cut(s) | 586 |
| HhaI | GCGC | 1 cut(s) | 984 |
| Hin1I | GRCGYC | 1 cut(s) | 1074 |
| Hin1II | CATG | 6 cut(s) | 598, 670, 805, 917, 975, 1015 |
| Hin6I | GCGC | 1 cut(s) | 982 |
| HinP1I | GCGC | 1 cut(s) | 982 |
| HinfI | GANTC | 4 cut(s) | 49, 79, 413, 1008 |
| HpaII | CCGG | 4 cut(s) | 23, 83, 113, 538 |
| HphI | GGTGA | 3 cut(s) | 555, 806, 877 |
| Hpy166II | GTNNAC | 1 cut(s) | 747 |
| Hpy188I | TCNGA | 4 cut(s) | 383, 399, 692, 1089 |
| Hpy188III | TCNNGA | 7 cut(s) | 371, 423, 485, 647, 778, 842, 1064 |
| Hpy8I | GTNNAC | 1 cut(s) | 747 |
| Hpy99I | CGWCG | 5 cut(s) | 110, 242, 250, 253, 256 |
| HpyAV | CCTTC | 2 cut(s) | 222, 233 |
| HpyCH4III | ACNGT | 3 cut(s) | 92, 979, 1070 |
| HpyCH4IV | ACGT | 5 cut(s) | 15, 45, 105, 237, 1074 |
| HpyCH4V | TGCA | 6 cut(s) | 684, 823, 854, 909, 948, 1138 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 152, 269, 541, 945 |
| HpyF3I | CTNAG | 5 cut(s) | 279, 291, 327, 396, 871 |
| HpySE526I | ACGT | 5 cut(s) | 15, 45, 105, 237, 1074 |
| Hsp92I | GRCGYC | 1 cut(s) | 1074 |
| Hsp92II | CATG | 6 cut(s) | 598, 670, 805, 917, 975, 1015 |
| HspAI | GCGC | 1 cut(s) | 982 |
| Kzo9I | GATC | 4 cut(s) | 367, 602, 619, 867 |
| LmnI | GCTCC | 4 cut(s) | 176, 224, 487, 1066 |
| Lsp1109I | GCAGC | 2 cut(s) | 553, 838 |
| LweI | GCATC | 1 cut(s) | 835 |
| MaeII | ACGT | 5 cut(s) | 15, 45, 105, 237, 1074 |
| MaeIII | GTNAC | 6 cut(s) | 404, 449, 626, 1070, 1112, 1168 |
| MalI | GATC | 4 cut(s) | 369, 604, 621, 869 |
| MboI | GATC | 4 cut(s) | 367, 602, 619, 867 |
| MboII | GAAGA | 7 cut(s) | 157, 308, 329, 492, 495, 635, 730 |
| MflI | RGATCY | 1 cut(s) | 602 |
| MhlI | GDGCHC | 1 cut(s) | 537 |
| MlsI | TGGCCA | 1 cut(s) | 263 |
| MluCI | AATT | 5 cut(s) | 443, 488, 651, 966, 1056 |
| MluNI | TGGCCA | 1 cut(s) | 263 |
| MlyI | GAGTC | 1 cut(s) | 1002 |
| MmeI | TCCRAC | 1 cut(s) | 695 |
| Mox20I | TGGCCA | 1 cut(s) | 263 |
| MscI | TGGCCA | 1 cut(s) | 263 |
| Msp20I | TGGCCA | 1 cut(s) | 263 |
| MspI | CCGG | 4 cut(s) | 23, 83, 113, 538 |
| MspR9I | CCNGG | 2 cut(s) | 114, 269 |
| MvaI | CCWGG | 1 cut(s) | 269 |
| MvnI | CGCG | 1 cut(s) | 372 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 152, 269, 541, 945 |
| NciI | CCSGG | 1 cut(s) | 114 |
| NdeI | CATATG | 2 cut(s) | 810, 856 |
| NdeII | GATC | 4 cut(s) | 367, 602, 619, 867 |
| NlaIII | CATG | 6 cut(s) | 598, 670, 805, 917, 975, 1015 |
| NlaIV | GGNNCC | 2 cut(s) | 21, 118 |
| NmuCI | GTSAC | 2 cut(s) | 1070, 1168 |
| NruI | TCGCGA | 1 cut(s) | 372 |
| NsbI | TGCGCA | 1 cut(s) | 983 |
| PceI | AGGCCT | 1 cut(s) | 876 |
| PfeI | GAWTC | 3 cut(s) | 49, 79, 413 |
| PkrI | GCNGC | 3 cut(s) | 543, 850, 853 |
| PleI | GAGTC | 1 cut(s) | 1002 |
| PpsI | GAGTC | 1 cut(s) | 1002 |
| PshAI | GACNNNNGTC | 1 cut(s) | 104 |
| Psp6I | CCWGG | 1 cut(s) | 267 |
| PspGI | CCWGG | 1 cut(s) | 267 |
| PspN4I | GGNNCC | 2 cut(s) | 21, 118 |
| PspPI | GGNCC | 1 cut(s) | 117 |
| PsuI | RGATCY | 1 cut(s) | 602 |
| RruI | TCGCGA | 1 cut(s) | 372 |
| RsaI | GTAC | 4 cut(s) | 94, 429, 559, 976 |
| RsaNI | GTAC | 4 cut(s) | 93, 428, 558, 975 |
| SatI | GCNGC | 3 cut(s) | 542, 849, 852 |
| Sau3AI | GATC | 4 cut(s) | 367, 602, 619, 867 |
| Sau96I | GGNCC | 1 cut(s) | 117 |
| SchI | GAGTC | 1 cut(s) | 1002 |
| ScrFI | CCNGG | 2 cut(s) | 114, 269 |
| SduI | GDGCHC | 1 cut(s) | 537 |
| SfaNI | GCATC | 1 cut(s) | 835 |
| SfcI | CTRYAG | 1 cut(s) | 150 |
| SinI | GGWCC | 1 cut(s) | 117 |
| SmlI | CTYRAG | 2 cut(s) | 284, 421 |
| SmoI | CTYRAG | 2 cut(s) | 284, 421 |
| Sse9I | AATT | 5 cut(s) | 443, 488, 651, 966, 1056 |
| SseBI | AGGCCT | 1 cut(s) | 876 |
| SsiI | CCGC | 3 cut(s) | 344, 521, 848 |
| StuI | AGGCCT | 1 cut(s) | 876 |
| StyD4I | CCNGG | 2 cut(s) | 112, 267 |
| StyI | CCWWGG | 1 cut(s) | 551 |
| TaaI | ACNGT | 3 cut(s) | 92, 979, 1070 |
| TaiI | ACGT | 5 cut(s) | 18, 48, 108, 240, 1077 |
| TaqI | TCGA | 1 cut(s) | 1035 |
| TaqII | GACCGA | 1 cut(s) | 329 |
| TasI | AATT | 5 cut(s) | 443, 488, 651, 966, 1056 |
| TatI | WGTACW | 1 cut(s) | 974 |
| TauI | GCSGC | 1 cut(s) | 851 |
| TfiI | GAWTC | 3 cut(s) | 49, 79, 413 |
| TscAI | CASTG | 1 cut(s) | 629 |
| TseFI | GTSAC | 2 cut(s) | 1070, 1168 |
| TseI | GCWGC | 2 cut(s) | 541, 851 |
| Tsp45I | GTSAC | 2 cut(s) | 1070, 1168 |
| TspDTI | ATGAA | 5 cut(s) | 17, 818, 960, 978, 1158 |
| TspGWI | ACGGA | 4 cut(s) | 50, 80, 110, 693 |
| TspRI | CASTG | 1 cut(s) | 629 |
| VpaK11BI | GGWCC | 1 cut(s) | 117 |
| XapI | RAATTY | 3 cut(s) | 488, 651, 966 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 49 |
| ZraI | GACGTC | 1 cut(s) | 1075 |