pycom07g23280
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
24258114 .. 24263473
5360 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g23280.24

Sequence Viewer

Length: 2826 bp
ATGTCAATTAAGGCGTCGTTCAGCAACGTCGCTAACGTGTTGCTCGACTGGAACGATGCCCATGATGGCGATTTCTGTTCTTGGCGTGGGGTTTTCTGCGACAATGTCAGCCTCTCTGTGGCCTCCTTGAATCTGTCTAATCTGAACCTCGGCGGAGAGATTTCGCCAGCCATCGGAGACTTGGGGAACTTGGAATCCATAGACTTGCAAGGGAATAAGCTGACCGGTCAAATCCCCGATGAGATTGGCAACTGCGCTTCTCTCATACATTTGGATTTGTCTGACAATCTTTTATATGGAGACATACCATTCTCCGTGTCGAAGCTTAAGAAGATGGAGCTTTTAAATTTGAAGAACAATCAGCTGACTGGTCCCATCCCTACGACCCTCACTCAAATTCCGAACCTTAAAACTATTGATCTTGCTCAGAACGAGCTTAGTGGTGAGATTCCAAGGCTAATATATTGGAATGAAGTATTGCAGTACCTTGGATTGCGTGGAAACTCATTAACTGGATCACTGTCACCCGATATGTGTCAATTATCAGGCTTGTGGTACTTTGATGTTAGAGGCAATAATCTGACTGGCACGATCCCAGACAGCATTGGAAATTGCACAAGCTTTGAGATCCTGGATGTATCGTATAATCAGATCACAGGGGAAATTCCATACAACATTGGGTTTTTGCAAGTGGCTACGCTGTCTCTTCAAGGGAATAGACTAACGGGAAAAATTCCTGAGGTGATTGGTCTAATGCAGGCTCTTGCTGTCCTGGATTTGAGTGAGAACGAACTGGTAGGGCCAATCCCACCAATATTTGGCAATTTATCCTACACTGGGAAATTATACCTGCATGGCAACAAGTTGACTGGGTCAATTCCACCCGAACTCGGGAATATGTCAAAACTAAGCTACTTGCAGTTGAATGACAACAAACTGGTCGGGAGAATTCCTGCTGATCTTGGGAAGCTGGAGCAATTGTTTGAGTTGAATCTTGCCAACAATATTCTGGAAGGTCCCATTCCACATGATATCAGCTCCTGCACCGCCTTGAATCAATTCAATGTGCATGGAAACCGATTGACTGGGTCCATCCCTCTGACATTCCGAAATCTGCAGAGTTTGACTTATCTGAACTTGTCAAGGAACTATTTTAGTGGGAGAATAGCTATTGAGTTGGGACGCATCATCAATCTGGACACATTGGATCTGTCTAGCAATAACTTTTCTGGCCCTGTTCCAGCTTCGGTTGGTGATCTTGAGCACCTTCTGACCTTGAATTTGAGTGGTAATCATCTTAATGGTTCTCTGCCAGCGGAATCTGGGAACCTCAGGAGCGTTCAAACTATTGATATGTCATTCAACTATCTTTCTGGGAGCATCCCAGGAGAATTGGGGCAGTTGCAGAACCTTGCAGTGCTGATACTCAATAACAACTTATTGAATGGAACCATACCTGATCAGCTAACCAACTGTTTCAGTCTTGCCACCCTGAATTTCTCATACAACAATCTATCAGGCGTTGTACCTCCTATGAGGAACTTTTCACGATTTTTGCCAGACAGCTTTACTGGAAACCCATTGTTGTGCGGCAACTGGTTGGGATCGATATGTAGTCCTGCCACAAAATCCAGGGCTCTATTCTCCAGAACAGCCGTCGTTTGTATGGCATTAGGCTTCATCACATTGTTATCCATGGTAATAGTTGCAGTTTACAAATCTAACCGACCAAAGGATTTAACGATGGGTTCTGGCAAGTGTGGGCAAGGTCCTCCTAAACTTGTAATCCTTCACATGGATATGGCTGTACACACCTTTGACGATATAATGAGAATTACTGAGAATCTAAATGAGAAGTATATTATAGGTTATGGTGCCTCTAGTACAGTGTACAAGTGTATGCTAAAGAATTCCCGACCCATGGCCATTAAGCGACTCTACACTCGGTATCCTAATGACATGCGGGAGTTTGAGACTGAACTTGAAACCGTTGGCAGAATCAAGCATAGAAATCTTGTCAGTCTGCATGGCTATTCACTGTCTCCCCATGGAAATCTACTTTTCTATGACTATATGGAGAACGGATCTCTCTGGGATCTGCTTCACGGACCATCAAAGAAGGTTAAACTTGACTGGGAAACGCGGTTGAAAATAGCGGTTGGTGCAGCACAGGGACTTGCTTATCTTCACCATGATTGCAACCCCCGAATCATTCACAGGGATGTTAAATCCTCAAACATTTTGCTGGACGAGAATTTTGTGGCTCATCTGTCTGATTTTGGAGTTGCAAAATTCATCCCAACTGCACAGACTCATGCATCAACTTATGTTCTTGGAACAATTGGCTACATTGATCCAGAGTATGCCCGAACCTCTCGTGTCACCGAAAAGTCTGACGTATATAGCTTTGGGGTCGTGCTTCTTGAGCTACTGACCGGGAAAAAGGCTGTGGAACAGGATTCTAACTTGCATCAACTGATACTGTCCAAGGCTGATACCAATACTGTAATGGAGTCTGTCGACCCGGAGGTTTCGGTTACTTGCATGGATTTATCTCATGTCAGGAAGACCTTCCAACTCGCCCTCCTGTGCACCAAGCGAAACCCTACTGAAAGACCAACCATGCACGAGGTTGCAAGGGTTCTGGTCTCCCTCCTTCCTGCAACAGCCACAAAACATGGTTCCATTCCGAAGGGCATTGATTACGCCAAGTTTGTGGCTGACAAGGAACCACAGAAGCGAAAACCGCAGCAGCAAGAGAGCCATTCATCCGACGCTCAGTGGTTTGTCCGCTTCGGTGAAGTCATATCCAAGAACACGCTTTGA

Protein Analysis

942

Amino Acids

103.52

Weight (kDa)

6.17

Isoelectric Point (pI)

28.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000383)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07180 AT5G07180 AT5G62230 AT5G62230
fragaria_vesca FvH4_7g28290 FvH4_7g28290 FvH4_7g28290 FvH4_7g28290
malus_domestica MD02G1216900.v1.1 MD07G1259500.v1.1 MD17G1114200.v1.1 MD17G1114300.v1.1
prunus_persica Prupe.2G283600_v2.0.a1
pyrus_communis pycom05g04060 pycom07g23280 pycom15g04040
rosa_chinensis RchiOBHm_Chr1g0375261 RchiOBHm_Chr2g0167851 RchiOBHm_Chr4g0390421 RchiOBHm_Chr4g0390431 RchiOBHm_Chr4g0442901 RchiOBHm_Chr4g0442981 RchiOBHm_Chr7g0228991 RchiOBHm_Chr7g0239711
rosa_laevigata RLG00000005460 RLG00000005968 RLG00000005971 RLG00000005973 RLG00000005978 RLG00000008547 RLG00000010012 RLG00000010245 RLG00000026673 RLG00000030046 RLG00000031637
rosa_multiflora Rmu_co8166860.1_g000001 Rmu_co8410161.1_g000001 Rmu_sc0000554.1_g000034 Rmu_sc0001782.1_g000050 Rmu_sc0002096.1_g000036 Rmu_sc0003006.1_g000022 Rmu_sc0003701.1_g000003 Rmu_sc0005877.1_g000004 Rmu_sc0006329.1_g000003 Rmu_sc0006695.1_g000032 Rmu_sc0008108.1_g000003 Rmu_sc0009414.1_g000003 Rmu_sc0010356.1_g000001 Rmu_sc0014119.1_g000002 Rmu_sc0014119.1_g000003 Rmu_sc0014161.1_g000004 Rmu_sc0023009.1_g000001 Rmu_sc0036835.1_g000001 Rmu_ssc0000204.1_g000009
rosa_roxburghii Rroxscaffold_1G00024810 Rroxscaffold_2G00110800 Rroxscaffold_2G00122430 Rroxscaffold_3G00261280 Rroxscaffold_4G00282890 Rroxscaffold_4G00330910 Rroxscaffold_5G00370350 Rroxscaffold_7G00161820
rosa_rugosa Rorug01G0389600 Rorug01G0389700 Rorug01G0389800 Rorug01G0389900 Rorug01G0389900 Rorug01G0390000 Rorug04G0343700 Rorug07G0155300
rosa_samantha Rh1AG400300 Rh1CG377300 Rh1DG394700 Rh2AG367100 Rh2BG612000 Rh2CG350500 Rh2DG389600 Rh3CG058100 Rh4AG396700 Rh4AG397100 Rh4AG397500 Rh4AG397600 Rh4AG397700 Rh4BG003000 Rh4BG127700 Rh4BG370500 Rh4BG393400 Rh4BG409200 Rh4CG035400 Rh4CG166700 Rh4CG408200 Rh4CG424700 Rh4DG028000 Rh4DG028100 Rh4DG403300 Rh4DG403800 Rh6DG080900 Rh7DG202700
rosa_wichuraiana Rw1G035540 Rw4G032760 Rw4G034230 Rw4G034240 Rw4G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 858
AccB1I GGYRCC 1 cut(s) 1874
AccB7I CCANNNNNTGG 1 cut(s) 818
AccI GTMKAC 1 cut(s) 2520
AccII CGCG 1 cut(s) 2143
AciI CCGC 9 cut(s) 153, 1047, 1316, 1590, 1963, 2143, 2156, 2747, 2791
AclWI GGATC 8 cut(s) 523, 586, 622, 1215, 1612, 2092, 2103, 2348
AcoI YGGCCR 1 cut(s) 1923
AcyI GRCGYC 1 cut(s) 14
AfaI GTAC 6 cut(s) 485, 557, 1527, 1809, 1885, 1892
AfiI CCNNNNNNNGG 9 cut(s) 118, 173, 818, 837, 890, 891, 1732, 1795, 1921
AflII CTTAAG 1 cut(s) 326
AflIII ACRYGT 1 cut(s) 36
AgeI ACCGGT 1 cut(s) 224
AjnI CCWGG 4 cut(s) 630, 771, 1384, 1631
AloI GAACNNNNNNTCC 2 cut(s) 179, 211
Alw21I GWGCWC 2 cut(s) 1266, 2594
Alw26I GTCTC 6 cut(s) 171, 294, 708, 1967, 2046, 2653
Alw44I GTGCAC 1 cut(s) 2590
AlwI GGATC 8 cut(s) 523, 586, 622, 1215, 1612, 2092, 2103, 2348
AlwNI CAGNNNCTG 1 cut(s) 1041
Ama87I CYCGRG 1 cut(s) 890
AoxI GGCC 4 cut(s) 120, 800, 1231, 1923
ApaLI GTGCAC 1 cut(s) 2590
ApeKI GCWGC 3 cut(s) 2165, 2749, 2752
ArsI GACNNNNNNTTYG 4 cut(s) 1264, 1296, 2240, 2272
AsiGI ACCGGT 1 cut(s) 224
Asp700I GAANNNNTTC 2 cut(s) 1058, 2570
AspLEI GCGC 1 cut(s) 257
AspS9I GGNCC 7 cut(s) 371, 800, 1016, 1089, 1232, 1769, 2108
AsuC2I CCSGG 2 cut(s) 2437, 2525
AsuHPI GGTGA 7 cut(s) 455, 516, 754, 1265, 2180, 2374, 2810
AvaI CYCGRG 1 cut(s) 890
AvaII GGWCC 5 cut(s) 371, 1016, 1089, 1769, 2108
AxyI CCTNAGG 2 cut(s) 738, 1331
BaeGI GKGCMC 1 cut(s) 2594
BalI TGGCCA 1 cut(s) 1925
BanI GGYRCC 1 cut(s) 1874
BanII GRGCYC 1 cut(s) 1639
BauI CACGAG 2 cut(s) 2376, 2627
BbsI GAAGAC 1 cut(s) 2573
Bbv12I GWGCWC 2 cut(s) 1266, 2594
BbvI GCAGC 3 cut(s) 2177, 2761, 2764
BccI CCATC 7 cut(s) 59, 179, 328, 383, 1100, 1738, 2119
BceAI ACGGC 1 cut(s) 1640
BciT130I CCWGG 4 cut(s) 632, 773, 1386, 1633
BciVI GTATCC 1 cut(s) 1959
BclI TGATCA 1 cut(s) 1459
BcnI CCSGG 2 cut(s) 2437, 2525
BcoDI GTCTC 6 cut(s) 171, 294, 708, 1967, 2046, 2653
BfaI CTAG 2 cut(s) 1215, 1881
BfmI CTRYAG 1 cut(s) 1115
BfrI CTTAAG 1 cut(s) 326
BfuAI ACCTGC 1 cut(s) 858
BfuI GTATCC 1 cut(s) 1959
BisI GCNGC 4 cut(s) 1591, 2166, 2750, 2753
BlsI GCNGC 4 cut(s) 1592, 2167, 2751, 2754
Bme1390I CCNGG 6 cut(s) 632, 773, 1386, 1633, 2437, 2525
Bme18I GGWCC 5 cut(s) 371, 1016, 1089, 1769, 2108
BmeT110I CYCGRG 1 cut(s) 890
BmgT120I GGNCC 7 cut(s) 371, 800, 1016, 1089, 1232, 1769, 2108
BmiI GGNNCC 8 cut(s) 373, 1018, 1090, 1328, 1450, 1876, 2683, 2730
BmrFI CCNGG 6 cut(s) 632, 773, 1386, 1633, 2437, 2525
BmrI ACTGGG 4 cut(s) 846, 879, 1095, 2143
BmsI GCATC 5 cut(s) 46, 1194, 1389, 2327, 2479
BmuI ACTGGG 4 cut(s) 846, 879, 1095, 2143
BpiI GAAGAC 1 cut(s) 2573
BpmI CTGGAG 2 cut(s) 992, 1630
BpuEI CTTGAG 2 cut(s) 1280, 2444
BpuMI CCSGG 2 cut(s) 2437, 2525
Bsa29I ATCGAT 1 cut(s) 1607
BsaHI GRCGYC 1 cut(s) 14
BsaI GGTCTC 1 cut(s) 2653
BsaJI CCNNGG 9 cut(s) 148, 452, 487, 1384, 1632, 1695, 1920, 2047, 2487
BsaWI WCCGGW 1 cut(s) 224
BsaXI ACNNNNNCTCC 4 cut(s) 965, 995, 2568, 2598
Bsc4I CCNNNNNNNGG 9 cut(s) 118, 173, 818, 837, 890, 891, 1732, 1795, 1921
Bse118I RCCGGY 1 cut(s) 224
Bse21I CCTNAGG 2 cut(s) 738, 1331
BseBI CCWGG 4 cut(s) 632, 773, 1386, 1633
BseCI ATCGAT 1 cut(s) 1607
BseDI CCNNGG 9 cut(s) 148, 452, 487, 1384, 1632, 1695, 1920, 2047, 2487
BseGI GGATG 7 cut(s) 375, 640, 1092, 1380, 2227, 2295, 2768
BseLI CCNNNNNNNGG 9 cut(s) 118, 173, 818, 837, 890, 891, 1732, 1795, 1921
BseMII CTCAG 5 cut(s) 440, 729, 1345, 1830, 2792
BseSI GKGCMC 1 cut(s) 2594
BseXI GCAGC 3 cut(s) 2177, 2761, 2764
BsgI GTGCAG 3 cut(s) 1027, 2184, 2289
Bsh1236I CGCG 1 cut(s) 2143
BshFI GGCC 4 cut(s) 122, 802, 1233, 1925
BshNI GGYRCC 1 cut(s) 1874
BshTI ACCGGT 1 cut(s) 224
BshVI ATCGAT 1 cut(s) 1607
BsiHKAI GWGCWC 2 cut(s) 1266, 2594
BsiHKCI CYCGRG 1 cut(s) 890
BsiSI CCGG 3 cut(s) 225, 2436, 2525
BslFI GGGAC 4 cut(s) 357, 1002, 1194, 2187
BslI CCNNNNNNNGG 9 cut(s) 118, 173, 818, 837, 890, 891, 1732, 1795, 1921
BsmAI GTCTC 6 cut(s) 171, 294, 708, 1967, 2046, 2653
BsmFI GGGAC 4 cut(s) 357, 1002, 1194, 2187
BsnI GGCC 4 cut(s) 122, 802, 1233, 1925
Bso31I GGTCTC 1 cut(s) 2653
BsoBI CYCGRG 1 cut(s) 890
Bsp1286I GDGCHC 3 cut(s) 1266, 1639, 2594
Bsp1407I TGTACA 2 cut(s) 1807, 1890
Bsp19I CCATGG 3 cut(s) 1695, 1920, 2047
BspACI CCGC 9 cut(s) 153, 1047, 1316, 1590, 1963, 2143, 2156, 2747, 2791
BspANI GGCC 4 cut(s) 122, 802, 1233, 1925
BspCNI CTCAG 5 cut(s) 439, 730, 1344, 1831, 2791
BspDI ATCGAT 1 cut(s) 1607
BspFNI CGCG 1 cut(s) 2143
BspLI GGNNCC 8 cut(s) 373, 1018, 1090, 1328, 1450, 1876, 2683, 2730
BspMAI CTGCAG 1 cut(s) 1119
BspMI ACCTGC 1 cut(s) 858
BspPI GGATC 8 cut(s) 523, 586, 622, 1215, 1612, 2092, 2103, 2348
BspT107I GGYRCC 1 cut(s) 1874
BspTI CTTAAG 1 cut(s) 326
BspTNI GGTCTC 1 cut(s) 2653
BsrFI RCCGGY 1 cut(s) 224
BsrGI TGTACA 2 cut(s) 1807, 1890
BssAI RCCGGY 1 cut(s) 224
BssECI CCNNGG 9 cut(s) 148, 452, 487, 1384, 1632, 1695, 1920, 2047, 2487
BssNI GRCGYC 1 cut(s) 14
BssSI CACGAG 2 cut(s) 2376, 2627
BssT1I CCWWGG 6 cut(s) 452, 487, 1695, 1920, 2047, 2487
Bst2BI CACGAG 2 cut(s) 2376, 2627
Bst2UI CCWGG 4 cut(s) 632, 773, 1386, 1633
Bst4CI ACNGT 7 cut(s) 522, 1475, 1888, 1990, 2040, 2484, 2506
Bst6I CTCTTC 1 cut(s) 711
BstACI GRCGYC 1 cut(s) 14
BstAFI CTTAAG 1 cut(s) 326
BstAUI TGTACA 2 cut(s) 1807, 1890
BstC8I GCNNGC 3 cut(s) 168, 759, 1314
BstDEI CTNAG 7 cut(s) 426, 437, 738, 908, 1331, 1839, 2778
BstDSI CCRYGG 3 cut(s) 1695, 1920, 2047
BstF5I GGATG 7 cut(s) 375, 640, 1092, 1380, 2227, 2295, 2768
BstFNI CGCG 1 cut(s) 2143
BstHHI GCGC 1 cut(s) 257
BstMAI GTCTC 6 cut(s) 171, 294, 708, 1967, 2046, 2653
BstMWI GCNNNNNNNGC 3 cut(s) 2162, 2425, 2746
BstNI CCWGG 4 cut(s) 632, 773, 1386, 1633
BstNSI RCATGY 1 cut(s) 1963
BstSCI CCNGG 6 cut(s) 630, 771, 1384, 1631, 2435, 2523
BstSFI CTRYAG 1 cut(s) 1115
BstSLI GKGCMC 1 cut(s) 2594
BstUI CGCG 1 cut(s) 2143
BstV1I GCAGC 3 cut(s) 2177, 2761, 2764
BstV2I GAAGAC 1 cut(s) 2573
BstX2I RGATCY 4 cut(s) 627, 1207, 2084, 2095
BstXI CCANNNNNNTGG 1 cut(s) 2716
BstYI RGATCY 4 cut(s) 627, 1207, 2084, 2095
Bsu15I ATCGAT 1 cut(s) 1607
Bsu36I CCTNAGG 2 cut(s) 738, 1331
BsuI GTATCC 1 cut(s) 1959
BsuRI GGCC 4 cut(s) 122, 802, 1233, 1925
BsuTUI ATCGAT 1 cut(s) 1607
BtgI CCRYGG 3 cut(s) 1695, 1920, 2047
BtsCI GGATG 7 cut(s) 375, 640, 1092, 1380, 2227, 2295, 2768
BtsI GCAGTG 1 cut(s) 1422
BtsIMutI CAGTG 6 cut(s) 518, 834, 1422, 1893, 2036, 2786
BveI ACCTGC 1 cut(s) 858
Cac8I GCNNGC 3 cut(s) 168, 759, 1314
CaiI CAGNNNCTG 1 cut(s) 1041
CfoI GCGC 1 cut(s) 257
Cfr10I RCCGGY 1 cut(s) 224
Cfr13I GGNCC 7 cut(s) 371, 800, 1016, 1089, 1232, 1769, 2108
ClaI ATCGAT 1 cut(s) 1607
CseI GACGC 3 cut(s) 3, 1191, 2783
Csp6I GTAC 6 cut(s) 484, 556, 1526, 1808, 1884, 1891
CspAI ACCGGT 1 cut(s) 224
CviQI GTAC 6 cut(s) 484, 556, 1526, 1808, 1884, 1891
DdeI CTNAG 7 cut(s) 426, 437, 738, 908, 1331, 1839, 2778
DraI TTTAAA 1 cut(s) 345
EaeI YGGCCR 1 cut(s) 1923
Eam1104I CTCTTC 1 cut(s) 711
EarI CTCTTC 1 cut(s) 711
EciI GGCGGA 1 cut(s) 168
Eco130I CCWWGG 6 cut(s) 452, 487, 1695, 1920, 2047, 2487
Eco24I GRGCYC 1 cut(s) 1639
Eco31I GGTCTC 1 cut(s) 2653
Eco32I GATATC 1 cut(s) 1033
Eco47I GGWCC 5 cut(s) 371, 1016, 1089, 1769, 2108
Eco81I CCTNAGG 2 cut(s) 738, 1331
Eco88I CYCGRG 1 cut(s) 890
EcoO109I RGGNCCY 2 cut(s) 1016, 1769
EcoRI GAATTC 2 cut(s) 948, 1909
EcoRII CCWGG 4 cut(s) 630, 771, 1384, 1631
EcoRV GATATC 1 cut(s) 1033
EcoT14I CCWWGG 6 cut(s) 452, 487, 1695, 1920, 2047, 2487
EcoT22I ATGCAT 1 cut(s) 2320
EcoT38I GRGCYC 1 cut(s) 1639
ErhI CCWWGG 6 cut(s) 452, 487, 1695, 1920, 2047, 2487
FaqI GGGAC 4 cut(s) 357, 1002, 1194, 2187
FauI CCCGC 1 cut(s) 1956
FbaI TGATCA 1 cut(s) 1459
FblI GTMKAC 1 cut(s) 2520
Fnu4HI GCNGC 4 cut(s) 1591, 2166, 2750, 2753
FokI GGATG 7 cut(s) 362, 647, 1079, 1367, 2234, 2282, 2755
FriOI GRGCYC 1 cut(s) 1639
Fsp4HI GCNGC 4 cut(s) 1591, 2166, 2750, 2753
FspBI CTAG 2 cut(s) 1215, 1881
GlaI GCGC 1 cut(s) 256
GluI GCNGC 4 cut(s) 1591, 2166, 2750, 2753
GsuI CTGGAG 2 cut(s) 992, 1630
HaeIII GGCC 4 cut(s) 122, 802, 1233, 1925
HapII CCGG 3 cut(s) 225, 2436, 2525
HgaI GACGC 3 cut(s) 3, 1191, 2783
HhaI GCGC 1 cut(s) 257
Hin1I GRCGYC 1 cut(s) 14
Hin6I GCGC 1 cut(s) 255
HinP1I GCGC 1 cut(s) 255
HincII GTYRAC 2 cut(s) 867, 2521
HindII GTYRAC 2 cut(s) 867, 2521
HindIII AAGCTT 2 cut(s) 323, 619
HpaII CCGG 3 cut(s) 225, 2436, 2525
HphI GGTGA 7 cut(s) 455, 516, 754, 1265, 2180, 2374, 2810
Hpy166II GTNNAC 6 cut(s) 867, 1714, 1810, 1891, 2521, 2592
Hpy8I GTNNAC 6 cut(s) 867, 1714, 1810, 1891, 2521, 2592
Hpy99I CGWCG 4 cut(s) 19, 32, 1661, 2777
HpyAV CCTTC 7 cut(s) 1007, 1277, 1799, 2113, 2581, 2666, 2686
HpyCH4III ACNGT 7 cut(s) 522, 1475, 1888, 1990, 2040, 2484, 2506
HpyCH4IV ACGT 3 cut(s) 27, 36, 2397
HpyF10VI GCNNNNNNNGC 3 cut(s) 2162, 2425, 2746
HpyF3I CTNAG 7 cut(s) 426, 437, 738, 908, 1331, 1839, 2778
HpySE526I ACGT 3 cut(s) 27, 36, 2397
Hsp92I GRCGYC 1 cut(s) 14
HspAI GCGC 1 cut(s) 255
Ksp22I TGATCA 1 cut(s) 1459
LmnI GCTCC 5 cut(s) 337, 973, 1043, 1335, 1377
Lsp1109I GCAGC 3 cut(s) 2177, 2761, 2764
LweI GCATC 5 cut(s) 46, 1194, 1389, 2327, 2479
MaeI CTAG 2 cut(s) 1215, 1881
MaeII ACGT 3 cut(s) 27, 36, 2397
MaeIII GTNAC 3 cut(s) 522, 2380, 2536
MboII GAAGA 5 cut(s) 343, 364, 698, 2177, 2578
MfeI CAATTG 2 cut(s) 977, 2340
MflI RGATCY 4 cut(s) 627, 1207, 2084, 2095
MhlI GDGCHC 3 cut(s) 1266, 1639, 2594
MlsI TGGCCA 1 cut(s) 1925
MluNI TGGCCA 1 cut(s) 1925
MlyI GAGTC 3 cut(s) 1929, 2305, 2522
MmeI TCCRAC 2 cut(s) 2599, 2796
Mox20I TGGCCA 1 cut(s) 1925
Mph1103I ATGCAT 1 cut(s) 2320
MroXI GAANNNNTTC 2 cut(s) 1058, 2570
MscI TGGCCA 1 cut(s) 1925
MslI CAYNNNNRTG 4 cut(s) 1299, 1585, 1799, 2220
Msp20I TGGCCA 1 cut(s) 1925
MspA1I CMGCKG 2 cut(s) 364, 1316
MspCI CTTAAG 1 cut(s) 326
MspI CCGG 3 cut(s) 225, 2436, 2525
MspR9I CCNGG 6 cut(s) 632, 773, 1386, 1633, 2437, 2525
MunI CAATTG 2 cut(s) 977, 2340
MvaI CCWGG 4 cut(s) 632, 773, 1386, 1633
MvnI CGCG 1 cut(s) 2143
MwoI GCNNNNNNNGC 3 cut(s) 2162, 2425, 2746
NciI CCSGG 2 cut(s) 2437, 2525
NcoI CCATGG 3 cut(s) 1695, 1920, 2047
NlaIV GGNNCC 8 cut(s) 373, 1018, 1090, 1328, 1450, 1876, 2683, 2730
NmeAIII GCCGAG 1 cut(s) 129
NmuCI GTSAC 2 cut(s) 522, 2380
NsiI ATGCAT 1 cut(s) 2320
NspI RCATGY 1 cut(s) 1963
PcsI WCGNNNNNNNCGW 3 cut(s) 33, 42, 51
PdmI GAANNNNTTC 2 cut(s) 1058, 2570
PflFI GACNNNGTC 3 cut(s) 104, 871, 1087
PflMI CCANNNNNTGG 1 cut(s) 818
PfoI TCCNGGA 2 cut(s) 630, 771
PinAI ACCGGT 1 cut(s) 224
PkrI GCNGC 4 cut(s) 1592, 2167, 2751, 2754
PleI GAGTC 3 cut(s) 1929, 2305, 2521
PpsI GAGTC 3 cut(s) 1929, 2305, 2521
PpuMI RGGWCCY 2 cut(s) 1016, 1769
Psp5II RGGWCCY 2 cut(s) 1016, 1769
Psp6I CCWGG 4 cut(s) 630, 771, 1384, 1631
PspGI CCWGG 4 cut(s) 630, 771, 1384, 1631
PspN4I GGNNCC 8 cut(s) 373, 1018, 1090, 1328, 1450, 1876, 2683, 2730
PspPI GGNCC 7 cut(s) 371, 800, 1016, 1089, 1232, 1769, 2108
PspPPI RGGWCCY 2 cut(s) 1016, 1769
PstI CTGCAG 1 cut(s) 1119
PstNI CAGNNNCTG 1 cut(s) 1041
PsuI RGATCY 4 cut(s) 627, 1207, 2084, 2095
PsyI GACNNNGTC 3 cut(s) 104, 871, 1087
PvuII CAGCTG 1 cut(s) 364
RsaI GTAC 6 cut(s) 485, 557, 1527, 1809, 1885, 1892
RsaNI GTAC 6 cut(s) 484, 556, 1526, 1808, 1884, 1891
RseI CAYNNNNRTG 4 cut(s) 1299, 1585, 1799, 2220
SalI GTCGAC 1 cut(s) 2519
SatI GCNGC 4 cut(s) 1591, 2166, 2750, 2753
Sau96I GGNCC 7 cut(s) 371, 800, 1016, 1089, 1232, 1769, 2108
SchI GAGTC 3 cut(s) 1929, 2305, 2522
ScrFI CCNGG 6 cut(s) 632, 773, 1386, 1633, 2437, 2525
SduI GDGCHC 3 cut(s) 1266, 1639, 2594
SfaNI GCATC 5 cut(s) 46, 1194, 1389, 2327, 2479
SfcI CTRYAG 1 cut(s) 1115
SinI GGWCC 5 cut(s) 371, 1016, 1089, 1769, 2108
SmiMI CAYNNNNRTG 4 cut(s) 1299, 1585, 1799, 2220
SmlI CTYRAG 3 cut(s) 326, 1259, 2423
SmoI CTYRAG 3 cut(s) 326, 1259, 2423
SsiI CCGC 9 cut(s) 153, 1047, 1316, 1590, 1963, 2143, 2156, 2747, 2791
SspI AATATT 2 cut(s) 816, 1006
SspMI CTAG 2 cut(s) 1215, 1881
StyD4I CCNGG 6 cut(s) 630, 771, 1384, 1631, 2435, 2523
StyI CCWWGG 6 cut(s) 452, 487, 1695, 1920, 2047, 2487
TaaI ACNGT 7 cut(s) 522, 1475, 1888, 1990, 2040, 2484, 2506
TaiI ACGT 3 cut(s) 30, 39, 2400
TaqI TCGA 4 cut(s) 45, 320, 1607, 2520
TatI WGTACW 3 cut(s) 1807, 1883, 1890
TauI GCSGC 1 cut(s) 1593
TscAI CASTG 6 cut(s) 525, 841, 1422, 1893, 2043, 2786
TseFI GTSAC 2 cut(s) 522, 2380
TseI GCWGC 3 cut(s) 2165, 2749, 2752
Tsp45I GTSAC 2 cut(s) 522, 2380
TspDTI ATGAA 4 cut(s) 486, 1669, 2284, 2757
TspGWI ACGGA 3 cut(s) 304, 2097, 2121
TspRI CASTG 6 cut(s) 525, 841, 1422, 1893, 2043, 2786
Tth111I GACNNNGTC 3 cut(s) 104, 871, 1087
Van91I CCANNNNNTGG 1 cut(s) 818
Vha464I CTTAAG 1 cut(s) 326
VneI GTGCAC 1 cut(s) 2590
VpaK11BI GGWCC 5 cut(s) 371, 1016, 1089, 1769, 2108
XceI RCATGY 1 cut(s) 1963
XcmI CCANNNNNNNNNTGG 3 cut(s) 178, 1006, 2506
XmiI GTMKAC 1 cut(s) 2520
XmnI GAANNNNTTC 2 cut(s) 1058, 2570
XspI CTAG 2 cut(s) 1215, 1881
Zsp2I ATGCAT 1 cut(s) 2320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.