FvH4_7g28290
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000383
Physical Location & Seq
Reverse (-)
20978800 .. 20986018
7219 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g28290.t3

Sequence Viewer

Length: 2970 bp
ATGGAGGAGGAGAGAGTGGGTTTGAGATGGAGGAGGAAGAAGGATGTGGTTCTTGTTCTCTGGTTTGGGTTGGCTTTGTTTCTGCTGTTTCCTGTTGCTTCGTCACTGAACGATGAAGGAAAAGCCTTGATGGCAATCAAGGCCTCGTTCAGCAACGTAGCCAACGTGTTACTGGACTGGAACGATGCTCATGACGACGATTTCTGTTCTTGGCGTGGAGTTTTCTGTGACAATGTCAGCCTTTCTGTGGCCTCTTTGAATTTGTCCAGCTTAAATCTTGGTGGGGAGATTTCTCCAGCTGTTGGAGATTTGGGGAATTTAGAATCTATAGACTTGCAGGGAAATAAGCTGACTGGTCAAATCCCAGATGAGATTGGCAACTGTGCTTCACTTATATATCTGGATTTGTCTGACAATAATTTGTCTGGAGACATACCCTTCTCGTTTTCAAAGCTGAAGAAACTTGAGGTTTTGAATTTGAAGAACAATCAGTTGACTGGTCCTATCCCTACAACTCTTACCCAAATTCCGAACCTCAAATCTCTTGATCTTGCTCGCAACCAGCTCACTGGTGAAATACCAAGGTTAATATATTGGAATGAAGTGTTGCAATACCTTGGATTGCGCGGCAACTCTTTGACTGGAGCATTGTCCCCTGATATGTGTCAATTAACTGGTCTTTGGTACTTTGATGTTAGAGGCAATAACTTGACTGGCCCGATCCCCGATAACATTGGCAACTGTACAAGCTTTGAGATCCTGGACATCTCATACAATCAAATCACTGGTGAAATTCCATATAACATTGGATTTTTACAAGTGGCTACTCTGTCGCTACAAGGGAATAGGCTCACTGGGAAGATTCCTGAGGTTATTGGTTTAATGCAGGCGCTTGCTGTTTTGGATTTGAGTGAGAATGAACTTGTAGGGCCAATCCCACCTATACTGGGCAATCTATCGTACACTGGGAAACTATACTTGCATGGTAACAATTTGACTGGCACTATTCCACCTGAACTTGGCAATATGTCAAAACTTAGCTACTTGCAATTAAATGACAACAATCTGGTTGGTAGTATTCCTGCTGAGCTTGGGAAGCTGAACCAGTTGTTTGAGCTGAATCTTGCCAGCAATGATCTGGAAGGTCCCATTCCACATGACATTGGTTCCTGCACAGCCTTGAATCAATTTAATGTTCATGGAAATCACTTGACTGGATCCATTCCTCTAGCATTGAGAAATCTGCAGAGTTTGACCTATCTGAATTTGTCAGCAAATGCCTTTAGCGGAAAAATTAATCTCGAGTTGGGGCATATCATCAATCTCGACACGTTGGATATGTCCAGTAATAATTTTTCAGGCACTGTTCCTACTTCTGTTGGCAATCTTGAGCACCTTCTTACTTTGAATTTGAGTGGGAATCATCTTGATGGTCCTTTGCCTGCAGAATTTGGGAACCTCATGAGTGTTCAGATCATTGATATGTCATTCAACAATCTCTCTGGGAACATCCCTTCAGAATTGGGTCAGTTGCAGAACGTTGCGGCATTGTTGCTAAATAACAACAACTTGCATGGAAAGATACCTGATCAGCTAACCAACTGTCTCAGCCTTGAGACCTTGAACGTTTCATACAACAATCTATCAGGCATTGTACCTCCCATGGGGAACTTTTCACGTTTTTCACCAAACAGCTTCATTGGAAACCCACTGTTGTGCAGTGACTGGCTGGGATCAATCTGCAGACCCCCCAAGTCCAGGGCTGTATTCTCCCGAGCAGCAGTTGTCTGTATGGCATTAGGCTTCATCACATTATTATCCATGGTAATAGTTGCAGTTTACAAGTCCAACCAACCAAAGCAGTTAATGATGGGATCTAGCAAGAGTGGACAAGGTCCTGCTAAACTTGTAATTCTTCACATGGATATGGCAATACACAGCTTTGAAGATATAATGCGAATCACAGAAAATCTAAATGAGAAGTATATCATAGGGTATGGTGCTTCTAGCACAGTGTACAAGTGTGTGCTGAAAAATTCCCGACCAATGGCAATCAAGCGCCTCTACAACCGATATCCACACAACTGGAGAGAGTTTGAGACAGAACTTGAAACCATTGGCAGTATCAAACATAGAAATCTAGTCAGTTTGCATGGATATTCTTTGTCTCCCCTTGGAAATCTCCTCTTCTATGACTACATGGAGAACGGGTCTCTGTGGGATATGCTTCATGGACCATCTAAAAAGGTTAAACTTGATTGGGAAACACGTTTGAAAATAGCAGTTGGAGCAGCTCAGGGACTTGCTTATCTTCACCATGATTGCAACCCCCGCATCATTCACAGGGATGTAAAATCCTCTAATATCCTACTGGATGAGGATTTTGAGGCTCATCTCTCTGATTTTGGAATTGCAAAGTCCATCCCTGGTGCGAATACCCATGCATCTACATATGTTCTGGGAACAATTGGTTACATTGATCCAGAATATGCTAGGACTTCTCGGCTCAATGAAAAATCTGATGTATATAGCTTTGGCATTGTACTTCTTGAGCTACTGACTGGGAAGAAGGCTGTGGACAGGGAGTCTAACTTGCATCAACTGATATTGTCCAAGGCAGATAACAATACTGTAATGGAGACTGTTGACCCTGAAGTTTCGGTCACTTGCATGGATACAACTCATCTCAAGAAAACTTTTCAACTCGCCCTACTGTGCACCAAGCGAAACCCCACTGAGAGGCCAACAATGCATGAAGTCGCAAGTGTCTTGGTCTCCCTCCTACCTCTACGTCACTCGAAGAAGCCTCTTTCAAAGGGTATCGACTATGCCAAGTTTGCAGTTGACAAAGAACAACAACAACCAAAAGCGCAACCGCAGCAGCCGAAGCCGGTCCAGCAGGAGAATCATTCAACTGATGCTCAATGGTTTGTTCGTTTTGGTGAGGTTATATCCAAGAACACTCTTTAA

Protein Analysis

990

Amino Acids

108.88

Weight (kDa)

5.89

Isoelectric Point (pI)

28.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 3 - 107 7.9e-07 Leucine-rich repeat region
LRR_8 PF13855 99 - 158 7.2e-07 Leucine rich repeat
LRR_14 PF23598 117 - 202 1.9e-07 Leucine-rich repeat region
Pkinase PF00069 318 - 579 4.9e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 321 - 581 1.2e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000383)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07180 AT5G07180 AT5G62230 AT5G62230
fragaria_vesca FvH4_7g28290 FvH4_7g28290 FvH4_7g28290 FvH4_7g28290
malus_domestica MD02G1216900.v1.1 MD07G1259500.v1.1 MD17G1114200.v1.1 MD17G1114300.v1.1
prunus_persica Prupe.2G283600_v2.0.a1
pyrus_communis pycom05g04060 pycom07g23280 pycom15g04040
rosa_chinensis RchiOBHm_Chr1g0375261 RchiOBHm_Chr2g0167851 RchiOBHm_Chr4g0390421 RchiOBHm_Chr4g0390431 RchiOBHm_Chr4g0442901 RchiOBHm_Chr4g0442981 RchiOBHm_Chr7g0228991 RchiOBHm_Chr7g0239711
rosa_laevigata RLG00000005460 RLG00000005968 RLG00000005971 RLG00000005973 RLG00000005978 RLG00000008547 RLG00000010012 RLG00000010245 RLG00000026673 RLG00000030046 RLG00000031637
rosa_multiflora Rmu_co8166860.1_g000001 Rmu_co8410161.1_g000001 Rmu_sc0000554.1_g000034 Rmu_sc0001782.1_g000050 Rmu_sc0002096.1_g000036 Rmu_sc0003006.1_g000022 Rmu_sc0003701.1_g000003 Rmu_sc0005877.1_g000004 Rmu_sc0006329.1_g000003 Rmu_sc0006695.1_g000032 Rmu_sc0008108.1_g000003 Rmu_sc0009414.1_g000003 Rmu_sc0010356.1_g000001 Rmu_sc0014119.1_g000002 Rmu_sc0014119.1_g000003 Rmu_sc0014161.1_g000004 Rmu_sc0023009.1_g000001 Rmu_sc0036835.1_g000001 Rmu_ssc0000204.1_g000009
rosa_roxburghii Rroxscaffold_1G00024810 Rroxscaffold_2G00110800 Rroxscaffold_2G00122430 Rroxscaffold_3G00261280 Rroxscaffold_4G00282890 Rroxscaffold_4G00330910 Rroxscaffold_5G00370350 Rroxscaffold_7G00161820
rosa_rugosa Rorug01G0389600 Rorug01G0389700 Rorug01G0389800 Rorug01G0389900 Rorug01G0389900 Rorug01G0390000 Rorug04G0343700 Rorug07G0155300
rosa_samantha Rh1AG400300 Rh1CG377300 Rh1DG394700 Rh2AG367100 Rh2BG612000 Rh2CG350500 Rh2DG389600 Rh3CG058100 Rh4AG396700 Rh4AG397100 Rh4AG397500 Rh4AG397600 Rh4AG397700 Rh4BG003000 Rh4BG127700 Rh4BG370500 Rh4BG393400 Rh4BG409200 Rh4CG035400 Rh4CG166700 Rh4CG408200 Rh4CG424700 Rh4DG028000 Rh4DG028100 Rh4DG403300 Rh4DG403800 Rh6DG080900 Rh7DG202700
rosa_wichuraiana Rw1G035540 Rw4G032760 Rw4G034230 Rw4G034240 Rw4G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 302
AccII CGCG 1 cut(s) 627
AciI CCGC 5 cut(s) 627, 1287, 1544, 2332, 2876
AclI AACGTT 2 cut(s) 1539, 1626
AclWI GGATC 7 cut(s) 715, 751, 1212, 1225, 1741, 1882, 2474
AcsI RAATTY 9 cut(s) 259, 316, 475, 525, 792, 1264, 1408, 1448, 2035
AcuI CTGAAG 3 cut(s) 476, 1500, 2673
AfaI GTAC 6 cut(s) 686, 745, 962, 1656, 2018, 2544
AfiI CCNNNNNNNGG 8 cut(s) 247, 302, 947, 1019, 1664, 1758, 2047, 2739
AflIII ACRYGT 3 cut(s) 165, 1329, 2267
AhdI GACNNNNNGTC 1 cut(s) 2584
AjnI CCWGG 3 cut(s) 759, 1757, 2425
AleI CACNNNNGTG 1 cut(s) 1714
Alw21I GWGCWC 2 cut(s) 1395, 2720
Alw26I GTCTC 8 cut(s) 423, 1610, 1610, 2093, 2172, 2217, 2633, 2779
Alw44I GTGCAC 1 cut(s) 2716
AlwI GGATC 7 cut(s) 715, 751, 1212, 1225, 1741, 1882, 2474
AlwNI CAGNNNCTG 2 cut(s) 1364, 1725
Ama87I CYCGRG 2 cut(s) 1301, 1773
AoxI GGCC 5 cut(s) 141, 249, 715, 929, 2741
ApaLI GTGCAC 1 cut(s) 2716
ApeKI GCWGC 4 cut(s) 1778, 2291, 2878, 2881
ApoI RAATTY 9 cut(s) 259, 316, 475, 525, 792, 1264, 1408, 1448, 2035
AseI ATTAAT 1 cut(s) 1296
AspLEI GCGC 4 cut(s) 627, 892, 2061, 2872
AspS9I GGNCC 8 cut(s) 500, 716, 929, 1145, 1433, 1895, 2234, 2893
AsuHPI GGTGA 5 cut(s) 584, 800, 1677, 2306, 2954
AvaI CYCGRG 2 cut(s) 1301, 1773
AvaII GGWCC 6 cut(s) 500, 1145, 1433, 1895, 2234, 2893
AxyI CCTNAGG 1 cut(s) 867
BaeGI GKGCMC 1 cut(s) 2720
BamHI GGATCC 1 cut(s) 1217
Bbv12I GWGCWC 2 cut(s) 1395, 2720
BbvI GCAGC 4 cut(s) 1790, 2303, 2890, 2893
BccI CCATC 6 cut(s) 21, 124, 1424, 1864, 2245, 2429
BciT130I CCWGG 3 cut(s) 761, 1759, 2427
BciVI GTATCC 1 cut(s) 2668
BclI TGATCA 1 cut(s) 1588
BcoDI GTCTC 8 cut(s) 423, 1610, 1610, 2093, 2172, 2217, 2633, 2779
BfaI CTAG 5 cut(s) 1229, 1878, 2007, 2141, 2493
BfmI CTRYAG 4 cut(s) 327, 1244, 1443, 1741
BfoI RGCGCY 2 cut(s) 893, 2062
BfuI GTATCC 1 cut(s) 2668
BglI GCCNNNNNGGC 1 cut(s) 131
BisI GCNGC 6 cut(s) 628, 1545, 1779, 2292, 2879, 2882
BlpI GCTNAGC 1 cut(s) 1086
BlsI GCNGC 6 cut(s) 629, 1546, 1780, 2293, 2880, 2883
Bme1390I CCNGG 3 cut(s) 761, 1759, 2427
Bme18I GGWCC 6 cut(s) 500, 1145, 1433, 1895, 2234, 2893
BmeRI GACNNNNNGTC 1 cut(s) 2584
BmeT110I CYCGRG 2 cut(s) 1301, 1773
BmgT120I GGNCC 8 cut(s) 500, 716, 929, 1145, 1433, 1895, 2234, 2893
BmiI GGNNCC 4 cut(s) 1147, 1168, 1219, 1457
BmrFI CCNGG 3 cut(s) 761, 1759, 2427
BmrI ACTGGG 4 cut(s) 864, 956, 975, 2571
BmsI GCATC 5 cut(s) 175, 2343, 2453, 2605, 2908
BmuI ACTGGG 4 cut(s) 864, 956, 975, 2571
BpmI CTGGAG 4 cut(s) 279, 447, 663, 2107
Bpu10I CCTNAGC 1 cut(s) 2295
Bpu1102I GCTNAGC 1 cut(s) 1086
BpuEI CTTGAG 5 cut(s) 485, 1409, 1634, 2570, 2672
BsaBI GATNNNNATC 1 cut(s) 134
BsaI GGTCTC 3 cut(s) 1610, 2217, 2779
BsaJI CCNNGG 8 cut(s) 581, 616, 1662, 1758, 1821, 2173, 2425, 2613
BsaXI ACNNNNNCTCC 2 cut(s) 2195, 2225
Bsc4I CCNNNNNNNGG 8 cut(s) 247, 302, 947, 1019, 1664, 1758, 2047, 2739
Bse118I RCCGGY 1 cut(s) 2890
Bse21I CCTNAGG 1 cut(s) 867
Bse3DI GCAATG 1 cut(s) 1138
Bse8I GATNNNNATC 1 cut(s) 134
BseBI CCWGG 3 cut(s) 761, 1759, 2427
BseDI CCNNGG 8 cut(s) 581, 616, 1662, 1758, 1821, 2173, 2425, 2613
BseGI GGATG 5 cut(s) 49, 1509, 2353, 2380, 2421
BseJI GATNNNNATC 1 cut(s) 134
BseLI CCNNNNNNNGG 8 cut(s) 247, 302, 947, 1019, 1664, 1758, 2047, 2739
BseMI GCAATG 1 cut(s) 1138
BseMII CTCAG 5 cut(s) 858, 1077, 1621, 2309, 2727
BseRI GAGGAG 4 cut(s) 20, 23, 46, 2174
BseSI GKGCMC 1 cut(s) 2720
BseXI GCAGC 4 cut(s) 1790, 2303, 2890, 2893
BseYI CCCAGC 1 cut(s) 1729
BsgI GTGCAG 2 cut(s) 1156, 1738
Bsh1236I CGCG 1 cut(s) 627
BshFI GGCC 5 cut(s) 143, 251, 717, 931, 2743
BsiHKAI GWGCWC 2 cut(s) 1395, 2720
BsiHKCI CYCGRG 2 cut(s) 1301, 1773
BsiSI CCGG 1 cut(s) 2891
BslFI GGGAC 3 cut(s) 637, 1131, 2313
BslI CCNNNNNNNGG 8 cut(s) 247, 302, 947, 1019, 1664, 1758, 2047, 2739
BsmAI GTCTC 8 cut(s) 423, 1610, 1610, 2093, 2172, 2217, 2633, 2779
BsmFI GGGAC 3 cut(s) 637, 1131, 2313
BsnI GGCC 5 cut(s) 143, 251, 717, 931, 2743
Bso31I GGTCTC 3 cut(s) 1610, 2217, 2779
BsoBI CYCGRG 2 cut(s) 1301, 1773
Bsp1286I GDGCHC 2 cut(s) 1395, 2720
Bsp1407I TGTACA 2 cut(s) 743, 2016
Bsp1720I GCTNAGC 1 cut(s) 1086
Bsp19I CCATGG 2 cut(s) 1662, 1821
BspACI CCGC 5 cut(s) 627, 1287, 1544, 2332, 2876
BspANI GGCC 5 cut(s) 143, 251, 717, 931, 2743
BspCNI CTCAG 5 cut(s) 859, 1078, 1620, 2308, 2728
BspFNI CGCG 1 cut(s) 627
BspHI TCATGA 2 cut(s) 190, 1461
BspLI GGNNCC 4 cut(s) 1147, 1168, 1219, 1457
BspMAI CTGCAG 3 cut(s) 1248, 1447, 1745
BspPI GGATC 7 cut(s) 715, 751, 1212, 1225, 1741, 1882, 2474
BspTNI GGTCTC 3 cut(s) 1610, 2217, 2779
BsrDI GCAATG 1 cut(s) 1138
BsrFI RCCGGY 1 cut(s) 2890
BsrGI TGTACA 2 cut(s) 743, 2016
BssAI RCCGGY 1 cut(s) 2890
BssECI CCNNGG 8 cut(s) 581, 616, 1662, 1758, 1821, 2173, 2425, 2613
BssT1I CCWWGG 6 cut(s) 581, 616, 1662, 1821, 2173, 2613
Bst2UI CCWGG 3 cut(s) 761, 1759, 2427
Bst4CI ACNGT 9 cut(s) 383, 743, 1366, 1604, 1713, 2014, 2632, 2644, 2715
Bst6I CTCTTC 1 cut(s) 2192
BstAUI TGTACA 2 cut(s) 743, 2016
BstC8I GCNNGC 5 cut(s) 556, 888, 894, 1129, 1443
BstDEI CTNAG 6 cut(s) 867, 1037, 1086, 1607, 2295, 2736
BstDSI CCRYGG 2 cut(s) 1662, 1821
BstF5I GGATG 5 cut(s) 49, 1509, 2353, 2380, 2421
BstFNI CGCG 1 cut(s) 627
BstH2I RGCGCY 2 cut(s) 893, 2062
BstHHI GCGC 4 cut(s) 627, 892, 2061, 2872
BstMAI GTCTC 8 cut(s) 423, 1610, 1610, 2093, 2172, 2217, 2633, 2779
BstNI CCWGG 3 cut(s) 761, 1759, 2427
BstSCI CCNGG 3 cut(s) 759, 1757, 2425
BstSFI CTRYAG 4 cut(s) 327, 1244, 1443, 1741
BstSLI GKGCMC 1 cut(s) 2720
BstUI CGCG 1 cut(s) 627
BstV1I GCAGC 4 cut(s) 1790, 2303, 2890, 2893
BstX2I RGATCY 3 cut(s) 756, 1217, 1874
BstXI CCANNNNNNTGG 2 cut(s) 569, 2085
BstYI RGATCY 3 cut(s) 756, 1217, 1874
Bsu36I CCTNAGG 1 cut(s) 867
BsuI GTATCC 1 cut(s) 2668
BsuRI GGCC 5 cut(s) 143, 251, 717, 931, 2743
BtgI CCRYGG 2 cut(s) 1662, 1821
BtsCI GGATG 5 cut(s) 49, 1509, 2353, 2380, 2421
BtsI GCAGTG 1 cut(s) 1726
Cac8I GCNNGC 5 cut(s) 556, 888, 894, 1129, 1443
CaiI CAGNNNCTG 2 cut(s) 1364, 1725
CciI TCATGA 2 cut(s) 190, 1461
CfoI GCGC 4 cut(s) 627, 892, 2061, 2872
Cfr10I RCCGGY 1 cut(s) 2890
Cfr13I GGNCC 8 cut(s) 500, 716, 929, 1145, 1433, 1895, 2234, 2893
Csp6I GTAC 6 cut(s) 685, 744, 961, 1655, 2017, 2543
CviQI GTAC 6 cut(s) 685, 744, 961, 1655, 2017, 2543
DdeI CTNAG 6 cut(s) 867, 1037, 1086, 1607, 2295, 2736
DriI GACNNNNNGTC 1 cut(s) 2584
Eam1104I CTCTTC 1 cut(s) 2192
Eam1105I GACNNNNNGTC 1 cut(s) 2584
EarI CTCTTC 1 cut(s) 2192
Eco130I CCWWGG 6 cut(s) 581, 616, 1662, 1821, 2173, 2613
Eco147I AGGCCT 1 cut(s) 143
Eco31I GGTCTC 3 cut(s) 1610, 2217, 2779
Eco32I GATATC 1 cut(s) 2075
Eco47I GGWCC 6 cut(s) 500, 1145, 1433, 1895, 2234, 2893
Eco57I CTGAAG 3 cut(s) 476, 1500, 2673
Eco81I CCTNAGG 1 cut(s) 867
Eco88I CYCGRG 2 cut(s) 1301, 1773
EcoO109I RGGNCCY 2 cut(s) 1145, 1895
EcoRII CCWGG 3 cut(s) 759, 1757, 2425
EcoRV GATATC 1 cut(s) 2075
EcoT14I CCWWGG 6 cut(s) 581, 616, 1662, 1821, 2173, 2613
EcoT22I ATGCAT 2 cut(s) 2446, 2754
ErhI CCWWGG 6 cut(s) 581, 616, 1662, 1821, 2173, 2613
FaqI GGGAC 3 cut(s) 637, 1131, 2313
FauI CCCGC 1 cut(s) 2339
FauNDI CATATG 1 cut(s) 2452
FbaI TGATCA 1 cut(s) 1588
Fnu4HI GCNGC 6 cut(s) 628, 1545, 1779, 2292, 2879, 2882
FokI GGATG 5 cut(s) 56, 1496, 2360, 2387, 2408
Fsp4HI GCNGC 6 cut(s) 628, 1545, 1779, 2292, 2879, 2882
FspBI CTAG 5 cut(s) 1229, 1878, 2007, 2141, 2493
GlaI GCGC 4 cut(s) 626, 891, 2060, 2871
GluI GCNGC 6 cut(s) 628, 1545, 1779, 2292, 2879, 2882
GsaI CCCAGC 1 cut(s) 1733
GsuI CTGGAG 4 cut(s) 279, 447, 663, 2107
HaeII RGCGCY 2 cut(s) 893, 2062
HaeIII GGCC 5 cut(s) 143, 251, 717, 931, 2743
HapII CCGG 1 cut(s) 2891
HhaI GCGC 4 cut(s) 627, 892, 2061, 2872
Hin6I GCGC 4 cut(s) 625, 890, 2059, 2870
HinP1I GCGC 4 cut(s) 625, 890, 2059, 2870
HincII GTYRAC 3 cut(s) 495, 2647, 2845
HindII GTYRAC 3 cut(s) 495, 2647, 2845
HindIII AAGCTT 1 cut(s) 748
HinfI GANTC 8 cut(s) 323, 862, 1120, 1183, 1420, 1959, 2585, 2905
HpaII CCGG 1 cut(s) 2891
HphI GGTGA 5 cut(s) 584, 800, 1677, 2306, 2954
Hpy166II GTNNAC 9 cut(s) 495, 963, 1840, 1889, 2017, 2578, 2647, 2718, 2845
Hpy188I TCNGA 7 cut(s) 412, 531, 1263, 1473, 1519, 2401, 2521
Hpy8I GTNNAC 9 cut(s) 495, 963, 1840, 1889, 2017, 2578, 2647, 2718, 2845
Hpy99I CGWCG 1 cut(s) 200
HpyAV CCTTC 7 cut(s) 34, 110, 448, 1136, 1406, 1524, 2563
HpyCH4III ACNGT 9 cut(s) 383, 743, 1366, 1604, 1713, 2014, 2632, 2644, 2715
HpyCH4IV ACGT 8 cut(s) 156, 165, 1331, 1539, 1626, 1678, 2269, 2791
HpyF3I CTNAG 6 cut(s) 867, 1037, 1086, 1607, 2295, 2736
HpySE526I ACGT 8 cut(s) 156, 165, 1331, 1539, 1626, 1678, 2269, 2791
HspAI GCGC 4 cut(s) 625, 890, 2059, 2870
Ksp22I TGATCA 1 cut(s) 1588
LmnI GCTCC 2 cut(s) 644, 2288
Lsp1109I GCAGC 4 cut(s) 1790, 2303, 2890, 2893
LweI GCATC 5 cut(s) 175, 2343, 2453, 2605, 2908
MaeI CTAG 5 cut(s) 1229, 1878, 2007, 2141, 2493
MaeII ACGT 8 cut(s) 156, 165, 1331, 1539, 1626, 1678, 2269, 2791
MaeIII GTNAC 8 cut(s) 102, 168, 227, 986, 1721, 2471, 2662, 2792
MfeI CAATTG 1 cut(s) 2466
MflI RGATCY 3 cut(s) 756, 1217, 1874
MhlI GDGCHC 2 cut(s) 1395, 2720
MlyI GAGTC 1 cut(s) 2594
MmeI TCCRAC 4 cut(s) 283, 1314, 1872, 2266
Mph1103I ATGCAT 2 cut(s) 2446, 2754
MslI CAYNNNNRTG 6 cut(s) 1428, 1481, 1714, 1925, 2346, 2669
MspA1I CMGCKG 1 cut(s) 299
MspI CCGG 1 cut(s) 2891
MspR9I CCNGG 3 cut(s) 761, 1759, 2427
MunI CAATTG 1 cut(s) 2466
MvaI CCWGG 3 cut(s) 761, 1759, 2427
MvnI CGCG 1 cut(s) 627
NcoI CCATGG 2 cut(s) 1662, 1821
NdeI CATATG 1 cut(s) 2452
NlaIV GGNNCC 4 cut(s) 1147, 1168, 1219, 1457
NmeAIII GCCGAG 1 cut(s) 2482
NmuCI GTSAC 5 cut(s) 102, 227, 1721, 2662, 2792
NsiI ATGCAT 2 cut(s) 2446, 2754
OliI CACNNNNGTG 1 cut(s) 1714
PaeR7I CTCGAG 1 cut(s) 1301
PagI TCATGA 2 cut(s) 190, 1461
PceI AGGCCT 1 cut(s) 143
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PfeI GAWTC 7 cut(s) 323, 862, 1120, 1183, 1420, 1959, 2905
PflFI GACNNNGTC 2 cut(s) 233, 1893
PflMI CCANNNNNTGG 1 cut(s) 302
PfoI TCCNGGA 1 cut(s) 759
PkrI GCNGC 6 cut(s) 629, 1546, 1780, 2293, 2880, 2883
PleI GAGTC 1 cut(s) 2593
PpsI GAGTC 1 cut(s) 2593
PpuMI RGGWCCY 2 cut(s) 1145, 1895
PshBI ATTAAT 1 cut(s) 1296
Psp1406I AACGTT 2 cut(s) 1539, 1626
Psp5II RGGWCCY 2 cut(s) 1145, 1895
Psp6I CCWGG 3 cut(s) 759, 1757, 2425
PspFI CCCAGC 1 cut(s) 1729
PspGI CCWGG 3 cut(s) 759, 1757, 2425
PspN4I GGNNCC 4 cut(s) 1147, 1168, 1219, 1457
PspPI GGNCC 8 cut(s) 500, 716, 929, 1145, 1433, 1895, 2234, 2893
PspPPI RGGWCCY 2 cut(s) 1145, 1895
PsrI GAACNNNNNNTAC 2 cut(s) 1616, 1648
PstI CTGCAG 3 cut(s) 1248, 1447, 1745
PstNI CAGNNNCTG 2 cut(s) 1364, 1725
PsuI RGATCY 3 cut(s) 756, 1217, 1874
PsyI GACNNNGTC 2 cut(s) 233, 1893
PvuII CAGCTG 1 cut(s) 299
RsaI GTAC 6 cut(s) 686, 745, 962, 1656, 2018, 2544
RsaNI GTAC 6 cut(s) 685, 744, 961, 1655, 2017, 2543
RseI CAYNNNNRTG 6 cut(s) 1428, 1481, 1714, 1925, 2346, 2669
SatI GCNGC 6 cut(s) 628, 1545, 1779, 2292, 2879, 2882
Sau96I GGNCC 8 cut(s) 500, 716, 929, 1145, 1433, 1895, 2234, 2893
SchI GAGTC 1 cut(s) 2594
ScrFI CCNGG 3 cut(s) 761, 1759, 2427
SduI GDGCHC 2 cut(s) 1395, 2720
SfaNI GCATC 5 cut(s) 175, 2343, 2453, 2605, 2908
SfcI CTRYAG 4 cut(s) 327, 1244, 1443, 1741
Sfr274I CTCGAG 1 cut(s) 1301
SinI GGWCC 6 cut(s) 500, 1145, 1433, 1895, 2234, 2893
SlaI CTCGAG 1 cut(s) 1301
SmiMI CAYNNNNRTG 6 cut(s) 1428, 1481, 1714, 1925, 2346, 2669
SmlI CTYRAG 6 cut(s) 464, 1301, 1388, 1613, 2549, 2687
SmoI CTYRAG 6 cut(s) 464, 1301, 1388, 1613, 2549, 2687
SseBI AGGCCT 1 cut(s) 143
SsiI CCGC 5 cut(s) 627, 1287, 1544, 2332, 2876
SspMI CTAG 5 cut(s) 1229, 1878, 2007, 2141, 2493
StuI AGGCCT 1 cut(s) 143
StyD4I CCNGG 3 cut(s) 759, 1757, 2425
StyI CCWWGG 6 cut(s) 581, 616, 1662, 1821, 2173, 2613
TaaI ACNGT 9 cut(s) 383, 743, 1366, 1604, 1713, 2014, 2632, 2644, 2715
TaiI ACGT 8 cut(s) 159, 168, 1334, 1542, 1629, 1681, 2272, 2794
TaqI TCGA 4 cut(s) 1302, 1326, 2798, 2823
TaqII GACCGA 1 cut(s) 2650
TatI WGTACW 3 cut(s) 743, 2016, 2542
TauI GCSGC 2 cut(s) 630, 1547
TfiI GAWTC 7 cut(s) 323, 862, 1120, 1183, 1420, 1959, 2905
TseFI GTSAC 5 cut(s) 102, 227, 1721, 2662, 2792
TseI GCWGC 4 cut(s) 1778, 2291, 2878, 2881
Tsp45I GTSAC 5 cut(s) 102, 227, 1721, 2662, 2792
Tth111I GACNNNGTC 2 cut(s) 233, 1893
Van91I CCANNNNNTGG 1 cut(s) 302
VneI GTGCAC 1 cut(s) 2716
VpaK11BI GGWCC 6 cut(s) 500, 1145, 1433, 1895, 2234, 2893
VspI ATTAAT 1 cut(s) 1296
XapI RAATTY 9 cut(s) 259, 316, 475, 525, 792, 1264, 1408, 1448, 2035
XcmI CCANNNNNNNNNTGG 2 cut(s) 169, 1135
XhoI CTCGAG 1 cut(s) 1301
XspI CTAG 5 cut(s) 1229, 1878, 2007, 2141, 2493
Zsp2I ATGCAT 2 cut(s) 2446, 2754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.