MD07G1259500.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
32570993 .. 32577469
6477 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1259500.v1.1.491

Sequence Viewer

Length: 2964 bp
ATGGAGAGAAGGGTTTTATGGAGGAAGAAGACGGAGCTCGTCTTCTGCTTTGGGTTAGCTTTAATGGCGGTTCTCTTTCCTCTCGGCTCCCCACTCAACGACGAAGGAAAGGCGTTGATGTCAATTAAGGCGTCGTTCAGCAACGTCGCTAACGTGTTGCTCGACTGGAACGATGCCCATGACGGTGATTTCTGTTCTTGGCGCGGGGTTTTCTGCGACAATGTCAGCCTCTCTGTGGCCTCCTTGAATCTGTCTAATCTGAACCTCGGCGGAGAGATTTCGCCAGCCATCGGAGACCTGGGGAACTTGGAATACATAGACTTGCAAGGGAATAAGCTGACTGGTCAAATCCCCGATGAGATTGGCGACTGTGCTTCTCTCATACATCTGGATTTGTCTGACAATCTTTTGTATGGAGACATACCATTCTCCGTGTCGAAGCTTAAGAAGCTGGAGCTTTTAAATTTGAAGAACAATCAGCTGACTGGTCCCATCCCTACGACTCTCACGCAAATTCCGAACCTTAAAACTCTTGATCTTGCTCAGAATGAGCTTACTGGCGAGATTCCAAGGCTAATATATTGGAATGAAGTATTGCAGTACCTTGGATTGCGCGGAAACTCATTAACTGGATCACTGTCACCTGATATGTGTCAATTGACAGGCTTGTGGTACTTTGATGTTAGAGGCAATAATCTGACTGGCACGATCCCAGAAAACATTGGAAATTGCACAAGCTTTGAGATCCTGGATATATCGTATAATCAGATCACAGGGGAAATTCCATACAACATTGGGTTTTTGCAAGTGGCTACGCTGTCCCTTCAAGGGAATAGACTGACAGGAAAAATCCCTGAGGTGATTGGTCTAATGCAGGCTCTTGCTGTCCTGGATTTGAGTGAGAACGAACTAGTAGGGCCAATCCCACCAATATTTGGCAATTTATCCTACACTGGGAAATTATACCTACATGGCAACAAGTTGACTGGGTCAATTCCTCCTGAACTTGGGAATATGTCAAAGCTTAGCTACTTGCAATTGAACGACAACAAACTGGTTGGGAGAATTCCTGCTGAGCTTGGGAAGCTGGAGCAGTTGTTTGAGTTGAATCTTGCCAACAATGTTCTGGAAGGTCCCATTCCACATGATATCAGTTCCTGCACCGCCTTGAATCAATTCAATGTGCATGGAAACCGCTTGACTGGGTCCATCCCTCTGACATTCCGAAATCTGCAGAGTTTGACTTATCTGAACTTGTCAAGGAACTATTTTAGTGGGAGAATAGCTATTGAGTTGGGACGCATCATCAATCTGGACACATTGGATCTGTCGAGCAATAACTTTTCTGGCCCTGTTCCAGCTTCGGTTGGTGATCTTGAGCACCTTCTGACCTTAAATTTGAGTGGTAATCATCTTAATGGTTCTTTGCCAGCAGAATTTGGGAACCTCAGGAGTGTTCAAACTATTGATATGTCATTCAACAATCTTTCCGGGAGCATCCCAGGAGAATTGGGGCAGTTGCAGAACCTTGCAGCACTGATACTCAATAACAACAACTTGAATGGAACAATACCTGATCAGCTAACCAACTGTTTCAGTCTTGCCACCTTGAATTTCTCGTACAACAATCTATCAGGCGTTGTACCTCCCATGAGGAACTTTTCACGATTTTTGCCAGACAGCTTTACTGGAAACCCGTTGTTGTGTGGCAACTGGTTAGGATCGATATGTAGTCCTGCCACAAAATCCAGGGCTCTATTCTCCAGAACAGCCGTCGTTTGTATGGCCTTAGGCTTCATCACATTGTTATCCATGGTAATAGTTGCAGTTTACAAATCCAACCAACCAAAGGATTTAACGATGGGTTCTGGCAAGTCCGGGCAAGGTCCTCCTAAACTTGTAATCCTTCACATGGATATGGCTGTACACACCTTTGACGATATAATGAGAATTACTGAGAATCTAAATGAGAAGTATATTATAGGTTATGGTGCTTCTAGTACAGTGTACAAGTGTATACTAAAGAATTCCCGACCCATGGCAATTAAGCGACTCTACACTCGGTATCCTAATGACATGCGGGAGTTTGAGACTGAACTTGAAACCGTTGGCAGAATCAAGCACAGAAATCTTGTCAGTCTGCATGGCTATTCACTGTCTCCCCATGGAAATCTACTCTTCTATGACTATATGGAGAACGGATCTCTATGGGATCTGCTTCACGGACCATCAAAGAAGGTTAAACTTGACTGGGAAACGCGGTTGAAAATAGCGGTTGGCGCAGCACAGGGACTTGCTTATCTTCACCATGATTGCAACCCCCGAATCATTCACAGGGATGTTAAATCCTCAAACATTTTGCTGGACGAGAATTTTGAGGCTCATCTCTCTGATTTTGGAGTTGCAAAATTTATCCCAACTGCAGAGACTCATGCATCAACTTATGTTCTTGGAACAATTGGCTACATTGATCCAGAATATGCCCGAACCTCCCGTGTCACTGAAAAGTCTGACGTGTATAGCTTTGGGGTCGTGCTTCTTGAGCTACTGACCGGGAAAAAGGCTGTGGAACAGGATTCCAACTTGCATCAACTGATACTGTCCAAGGCTGATACCAATACCGTAATGGAGTCTGTCGACCCTGAGGTTTCGGTTACTTGCATGGATTTATCTCATGTCAGGAAGACCTTCCAGCTCGCCCTCCTGTGCACCAAGCGAAACCCTACTGAAAGACCAACCATGCACGAGGTTGCAAGGGTTCTGGTCTCCCTCCTTCCTGCGCCGGCCACAAAACATTGTTCCATTCCAAAGGGCATTGACTACGCCAAGTTTGTGGCCGACAAGGAACAACAGAGGCCAAAATCGCAGCAGCAACAGCCGAGGCCAGTTCAGCAAGAGAGCCATTCATCCGACGCTCAGTGGTTTGTCCGCTTCGGCGAAGTCATATCCAAGAACACGCTTTGA

Protein Analysis

988

Amino Acids

108.91

Weight (kDa)

6.05

Isoelectric Point (pI)

29.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 73 5.8e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 95 - 181 5.1e-06 Leucine-rich repeat region
LRR_14 PF23598 273 - 371 3.2e-06 Leucine-rich repeat region
LRR_14 PF23598 335 - 445 9.1e-08 Leucine-rich repeat region
LRR_8 PF13855 437 - 496 2.3e-08 Leucine rich repeat
LRR_14 PF23598 455 - 538 4.4e-07 Leucine-rich repeat region
Pkinase PF00069 657 - 918 2.2e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 660 - 920 5.3e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000383)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07180 AT5G07180 AT5G62230 AT5G62230
fragaria_vesca FvH4_7g28290 FvH4_7g28290 FvH4_7g28290 FvH4_7g28290
malus_domestica MD02G1216900.v1.1 MD07G1259500.v1.1 MD17G1114200.v1.1 MD17G1114300.v1.1
prunus_persica Prupe.2G283600_v2.0.a1
pyrus_communis pycom05g04060 pycom07g23280 pycom15g04040
rosa_chinensis RchiOBHm_Chr1g0375261 RchiOBHm_Chr2g0167851 RchiOBHm_Chr4g0390421 RchiOBHm_Chr4g0390431 RchiOBHm_Chr4g0442901 RchiOBHm_Chr4g0442981 RchiOBHm_Chr7g0228991 RchiOBHm_Chr7g0239711
rosa_laevigata RLG00000005460 RLG00000005968 RLG00000005971 RLG00000005973 RLG00000005978 RLG00000008547 RLG00000010012 RLG00000010245 RLG00000026673 RLG00000030046 RLG00000031637
rosa_multiflora Rmu_co8166860.1_g000001 Rmu_co8410161.1_g000001 Rmu_sc0000554.1_g000034 Rmu_sc0001782.1_g000050 Rmu_sc0002096.1_g000036 Rmu_sc0003006.1_g000022 Rmu_sc0003701.1_g000003 Rmu_sc0005877.1_g000004 Rmu_sc0006329.1_g000003 Rmu_sc0006695.1_g000032 Rmu_sc0008108.1_g000003 Rmu_sc0009414.1_g000003 Rmu_sc0010356.1_g000001 Rmu_sc0014119.1_g000002 Rmu_sc0014119.1_g000003 Rmu_sc0014161.1_g000004 Rmu_sc0023009.1_g000001 Rmu_sc0036835.1_g000001 Rmu_ssc0000204.1_g000009
rosa_roxburghii Rroxscaffold_1G00024810 Rroxscaffold_2G00110800 Rroxscaffold_2G00122430 Rroxscaffold_3G00261280 Rroxscaffold_4G00282890 Rroxscaffold_4G00330910 Rroxscaffold_5G00370350 Rroxscaffold_7G00161820
rosa_rugosa Rorug01G0389600 Rorug01G0389700 Rorug01G0389800 Rorug01G0389900 Rorug01G0389900 Rorug01G0390000 Rorug04G0343700 Rorug07G0155300
rosa_samantha Rh1AG400300 Rh1CG377300 Rh1DG394700 Rh2AG367100 Rh2BG612000 Rh2CG350500 Rh2DG389600 Rh3CG058100 Rh4AG396700 Rh4AG397100 Rh4AG397500 Rh4AG397600 Rh4AG397700 Rh4BG003000 Rh4BG127700 Rh4BG370500 Rh4BG393400 Rh4BG409200 Rh4CG035400 Rh4CG166700 Rh4CG408200 Rh4CG424700 Rh4DG028000 Rh4DG028100 Rh4DG403300 Rh4DG403800 Rh6DG080900 Rh7DG202700
rosa_wichuraiana Rw1G035540 Rw4G032760 Rw4G034230 Rw4G034240 Rw4G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 935
AccI GTMKAC 2 cut(s) 2017, 2637
AccII CGCG 3 cut(s) 204, 615, 2260
AclWI GGATC 8 cut(s) 640, 703, 739, 1332, 1729, 2209, 2220, 2465
AcoI YGGCCR 2 cut(s) 2784, 2835
AcyI GRCGYC 1 cut(s) 131
AfaI GTAC 7 cut(s) 602, 674, 1622, 1644, 1926, 2002, 2009
AfiI CCNNNNNNNGG 9 cut(s) 235, 290, 828, 935, 954, 1007, 1849, 1912, 2038
AflII CTTAAG 1 cut(s) 443
AflIII ACRYGT 2 cut(s) 153, 2514
AhlI ACTAGT 1 cut(s) 910
AjiI CACGTC 1 cut(s) 2515
AjnI CCWGG 5 cut(s) 297, 747, 888, 1501, 1748
Alw21I GWGCWC 3 cut(s) 39, 1383, 2711
Alw26I GTCTC 6 cut(s) 288, 411, 2084, 2163, 2420, 2770
Alw44I GTGCAC 1 cut(s) 2707
AlwI GGATC 8 cut(s) 640, 703, 739, 1332, 1729, 2209, 2220, 2465
AlwNI CAGNNNCTG 1 cut(s) 1158
AoxI GGCC 8 cut(s) 237, 917, 1348, 1785, 2784, 2835, 2855, 2882
ApaLI GTGCAC 1 cut(s) 2707
ApeKI GCWGC 4 cut(s) 1532, 2282, 2866, 2869
ArsI GACNNNNNNTTYG 4 cut(s) 1381, 1413, 2357, 2389
Asp700I GAANNNNTTC 2 cut(s) 1175, 2687
AspLEI GCGC 4 cut(s) 204, 615, 2282, 2782
AspS9I GGNCC 7 cut(s) 488, 917, 1133, 1206, 1349, 1886, 2225
AsuC2I CCSGG 3 cut(s) 1492, 1879, 2554
AsuHPI GGTGA 5 cut(s) 197, 633, 871, 1382, 2297
AvaII GGWCC 5 cut(s) 488, 1133, 1206, 1886, 2225
AxyI CCTNAGG 4 cut(s) 855, 1448, 1789, 2643
BaeGI GKGCMC 1 cut(s) 2711
BanII GRGCYC 2 cut(s) 39, 1756
BauI CACGAG 1 cut(s) 2744
BbsI GAAGAC 3 cut(s) 34, 35, 2690
Bbv12I GWGCWC 3 cut(s) 39, 1383, 2711
BbvI GCAGC 4 cut(s) 1544, 2294, 2878, 2881
BccI CCATC 5 cut(s) 296, 500, 1217, 1855, 2236
BceAI ACGGC 1 cut(s) 1757
BciT130I CCWGG 5 cut(s) 299, 749, 890, 1503, 1750
BciVI GTATCC 1 cut(s) 2076
BclI TGATCA 1 cut(s) 1576
BcnI CCSGG 3 cut(s) 1492, 1879, 2554
BcoDI GTCTC 6 cut(s) 288, 411, 2084, 2163, 2420, 2770
BcuI ACTAGT 1 cut(s) 910
BfaI CTAG 2 cut(s) 911, 1998
BfmI CTRYAG 2 cut(s) 1232, 2421
BfrI CTTAAG 1 cut(s) 443
BfuI GTATCC 1 cut(s) 2076
BisI GCNGC 4 cut(s) 1533, 2283, 2867, 2870
BlpI GCTNAGC 2 cut(s) 1025, 1074
BlsI GCNGC 4 cut(s) 1534, 2284, 2868, 2871
Bme1390I CCNGG 8 cut(s) 299, 749, 890, 1492, 1503, 1750, 1879, 2554
Bme18I GGWCC 5 cut(s) 488, 1133, 1206, 1886, 2225
BmgBI CACGTC 1 cut(s) 2515
BmgT120I GGNCC 7 cut(s) 488, 917, 1133, 1206, 1349, 1886, 2225
BmiI GGNNCC 5 cut(s) 88, 490, 1135, 1207, 1445
BmrFI CCNGG 8 cut(s) 299, 749, 890, 1492, 1503, 1750, 1879, 2554
BmrI ACTGGG 4 cut(s) 963, 996, 1212, 2260
BmsI GCATC 5 cut(s) 163, 1311, 1506, 2444, 2596
BmuI ACTGGG 4 cut(s) 963, 996, 1212, 2260
BpiI GAAGAC 3 cut(s) 34, 35, 2690
BpmI CTGGAG 3 cut(s) 473, 1109, 1747
Bpu1102I GCTNAGC 2 cut(s) 1025, 1074
BpuEI CTTGAG 2 cut(s) 1397, 2561
BpuMI CCSGG 3 cut(s) 1492, 1879, 2554
Bsa29I ATCGAT 1 cut(s) 1724
BsaHI GRCGYC 1 cut(s) 131
BsaI GGTCTC 2 cut(s) 288, 2770
BsaXI ACNNNNNCTCC 2 cut(s) 1082, 1112
Bsc4I CCNNNNNNNGG 9 cut(s) 235, 290, 828, 935, 954, 1007, 1849, 1912, 2038
Bse118I RCCGGY 1 cut(s) 2782
Bse21I CCTNAGG 4 cut(s) 855, 1448, 1789, 2643
BseBI CCWGG 5 cut(s) 299, 749, 890, 1503, 1750
BseCI ATCGAT 1 cut(s) 1724
BseGI GGATG 5 cut(s) 492, 1209, 1497, 2344, 2906
BseLI CCNNNNNNNGG 9 cut(s) 235, 290, 828, 935, 954, 1007, 1849, 1912, 2038
BseMII CTCAG 7 cut(s) 557, 846, 1065, 1462, 1947, 2634, 2930
BseSI GKGCMC 1 cut(s) 2711
BseXI GCAGC 4 cut(s) 1544, 2294, 2878, 2881
BsgI GTGCAG 1 cut(s) 1144
Bsh1236I CGCG 3 cut(s) 204, 615, 2260
BshFI GGCC 8 cut(s) 239, 919, 1350, 1787, 2786, 2837, 2857, 2884
BshVI ATCGAT 1 cut(s) 1724
BsiHKAI GWGCWC 3 cut(s) 39, 1383, 2711
BsiSI CCGG 4 cut(s) 1491, 1878, 2553, 2783
BslFI GGGAC 5 cut(s) 474, 805, 1119, 1311, 2304
BslI CCNNNNNNNGG 9 cut(s) 235, 290, 828, 935, 954, 1007, 1849, 1912, 2038
BsmAI GTCTC 6 cut(s) 288, 411, 2084, 2163, 2420, 2770
BsmFI GGGAC 5 cut(s) 474, 805, 1119, 1311, 2304
BsnI GGCC 8 cut(s) 239, 919, 1350, 1787, 2786, 2837, 2857, 2884
Bso31I GGTCTC 2 cut(s) 288, 2770
Bsp1286I GDGCHC 4 cut(s) 39, 1383, 1756, 2711
Bsp1407I TGTACA 2 cut(s) 1924, 2007
Bsp1720I GCTNAGC 2 cut(s) 1025, 1074
Bsp19I CCATGG 3 cut(s) 1812, 2037, 2164
BspANI GGCC 8 cut(s) 239, 919, 1350, 1787, 2786, 2837, 2857, 2884
BspCNI CTCAG 7 cut(s) 556, 847, 1066, 1461, 1948, 2635, 2929
BspDI ATCGAT 1 cut(s) 1724
BspFNI CGCG 3 cut(s) 204, 615, 2260
BspLI GGNNCC 5 cut(s) 88, 490, 1135, 1207, 1445
BspMAI CTGCAG 2 cut(s) 1236, 2425
BspPI GGATC 8 cut(s) 640, 703, 739, 1332, 1729, 2209, 2220, 2465
BspTI CTTAAG 1 cut(s) 443
BspTNI GGTCTC 2 cut(s) 288, 2770
BsrFI RCCGGY 1 cut(s) 2782
BsrGI TGTACA 2 cut(s) 1924, 2007
BssAI RCCGGY 1 cut(s) 2782
BssNAI GTATAC 1 cut(s) 2018
BssNI GRCGYC 1 cut(s) 131
BssSI CACGAG 1 cut(s) 2744
BssT1I CCWWGG 6 cut(s) 569, 604, 1812, 2037, 2164, 2604
Bst1107I GTATAC 1 cut(s) 2018
Bst2BI CACGAG 1 cut(s) 2744
Bst2UI CCWGG 5 cut(s) 299, 749, 890, 1503, 1750
Bst4CI ACNGT 9 cut(s) 185, 371, 639, 1592, 2005, 2107, 2157, 2601, 2623
Bst6I CTCTTC 1 cut(s) 2183
BstACI GRCGYC 1 cut(s) 131
BstAFI CTTAAG 1 cut(s) 443
BstAUI TGTACA 2 cut(s) 1924, 2007
BstC8I GCNNGC 5 cut(s) 285, 876, 1431, 2697, 2784
BstDEI CTNAG 9 cut(s) 543, 855, 1025, 1074, 1448, 1789, 1956, 2643, 2916
BstDSI CCRYGG 3 cut(s) 1812, 2037, 2164
BstF5I GGATG 5 cut(s) 492, 1209, 1497, 2344, 2906
BstFNI CGCG 3 cut(s) 204, 615, 2260
BstHHI GCGC 4 cut(s) 204, 615, 2282, 2782
BstMAI GTCTC 6 cut(s) 288, 411, 2084, 2163, 2420, 2770
BstMWI GCNNNNNNNGC 8 cut(s) 65, 448, 1084, 2279, 2542, 2863, 2875, 2890
BstNI CCWGG 5 cut(s) 299, 749, 890, 1503, 1750
BstNSI RCATGY 1 cut(s) 2080
BstSCI CCNGG 8 cut(s) 297, 747, 888, 1490, 1501, 1748, 1877, 2552
BstSFI CTRYAG 2 cut(s) 1232, 2421
BstSLI GKGCMC 1 cut(s) 2711
BstUI CGCG 3 cut(s) 204, 615, 2260
BstV1I GCAGC 4 cut(s) 1544, 2294, 2878, 2881
BstV2I GAAGAC 3 cut(s) 34, 35, 2690
BstX2I RGATCY 4 cut(s) 744, 1324, 2201, 2212
BstXI CCANNNNNNTGG 1 cut(s) 2833
BstYI RGATCY 4 cut(s) 744, 1324, 2201, 2212
BstZ17I GTATAC 1 cut(s) 2018
Bsu15I ATCGAT 1 cut(s) 1724
Bsu36I CCTNAGG 4 cut(s) 855, 1448, 1789, 2643
BsuI GTATCC 1 cut(s) 2076
BsuRI GGCC 8 cut(s) 239, 919, 1350, 1787, 2786, 2837, 2857, 2884
BsuTUI ATCGAT 1 cut(s) 1724
BtgI CCRYGG 3 cut(s) 1812, 2037, 2164
BtrI CACGTC 1 cut(s) 2515
BtsCI GGATG 5 cut(s) 492, 1209, 1497, 2344, 2906
BtsIMutI CAGTG 7 cut(s) 635, 951, 1535, 2010, 2153, 2499, 2924
Cac8I GCNNGC 5 cut(s) 285, 876, 1431, 2697, 2784
CaiI CAGNNNCTG 1 cut(s) 1158
CfoI GCGC 4 cut(s) 204, 615, 2282, 2782
Cfr10I RCCGGY 1 cut(s) 2782
Cfr13I GGNCC 7 cut(s) 488, 917, 1133, 1206, 1349, 1886, 2225
ClaI ATCGAT 1 cut(s) 1724
CseI GACGC 3 cut(s) 120, 1308, 2921
Csp6I GTAC 7 cut(s) 601, 673, 1621, 1643, 1925, 2001, 2008
CviQI GTAC 7 cut(s) 601, 673, 1621, 1643, 1925, 2001, 2008
DdeI CTNAG 9 cut(s) 543, 855, 1025, 1074, 1448, 1789, 1956, 2643, 2916
DraI TTTAAA 1 cut(s) 462
EaeI YGGCCR 2 cut(s) 2784, 2835
Eam1104I CTCTTC 1 cut(s) 2183
EarI CTCTTC 1 cut(s) 2183
EciI GGCGGA 1 cut(s) 285
Ecl136II GAGCTC 1 cut(s) 37
Eco130I CCWWGG 6 cut(s) 569, 604, 1812, 2037, 2164, 2604
Eco24I GRGCYC 2 cut(s) 39, 1756
Eco31I GGTCTC 2 cut(s) 288, 2770
Eco32I GATATC 1 cut(s) 1150
Eco47I GGWCC 5 cut(s) 488, 1133, 1206, 1886, 2225
Eco53kI GAGCTC 1 cut(s) 37
Eco81I CCTNAGG 4 cut(s) 855, 1448, 1789, 2643
EcoICRI GAGCTC 1 cut(s) 37
EcoO109I RGGNCCY 2 cut(s) 1133, 1886
EcoRI GAATTC 2 cut(s) 1065, 2026
EcoRII CCWGG 5 cut(s) 297, 747, 888, 1501, 1748
EcoRV GATATC 1 cut(s) 1150
EcoT14I CCWWGG 6 cut(s) 569, 604, 1812, 2037, 2164, 2604
EcoT22I ATGCAT 1 cut(s) 2437
EcoT38I GRGCYC 2 cut(s) 39, 1756
ErhI CCWWGG 6 cut(s) 569, 604, 1812, 2037, 2164, 2604
FaqI GGGAC 5 cut(s) 474, 805, 1119, 1311, 2304
FauI CCCGC 2 cut(s) 197, 2073
FbaI TGATCA 1 cut(s) 1576
FblI GTMKAC 2 cut(s) 2017, 2637
Fnu4HI GCNGC 4 cut(s) 1533, 2283, 2867, 2870
FokI GGATG 5 cut(s) 479, 1196, 1484, 2351, 2893
FriOI GRGCYC 2 cut(s) 39, 1756
Fsp4HI GCNGC 4 cut(s) 1533, 2283, 2867, 2870
FspBI CTAG 2 cut(s) 911, 1998
GlaI GCGC 4 cut(s) 203, 614, 2281, 2781
GluI GCNGC 4 cut(s) 1533, 2283, 2867, 2870
GsuI CTGGAG 3 cut(s) 473, 1109, 1747
HaeIII GGCC 8 cut(s) 239, 919, 1350, 1787, 2786, 2837, 2857, 2884
HapII CCGG 4 cut(s) 1491, 1878, 2553, 2783
HgaI GACGC 3 cut(s) 120, 1308, 2921
HhaI GCGC 4 cut(s) 204, 615, 2282, 2782
Hin1I GRCGYC 1 cut(s) 131
Hin6I GCGC 4 cut(s) 202, 613, 2280, 2780
HinP1I GCGC 4 cut(s) 202, 613, 2280, 2780
HincII GTYRAC 2 cut(s) 984, 2638
HindII GTYRAC 2 cut(s) 984, 2638
HindIII AAGCTT 3 cut(s) 440, 736, 1022
HpaII CCGG 4 cut(s) 1491, 1878, 2553, 2783
HphI GGTGA 5 cut(s) 197, 633, 871, 1382, 2297
Hpy166II GTNNAC 7 cut(s) 984, 1831, 1927, 2008, 2018, 2638, 2709
Hpy8I GTNNAC 7 cut(s) 984, 1831, 1927, 2008, 2018, 2638, 2709
Hpy99I CGWCG 5 cut(s) 104, 136, 149, 1778, 2915
HpyAV CCTTC 9 cut(s) 3, 98, 833, 1124, 1394, 1916, 2230, 2698, 2783
HpyCH4III ACNGT 9 cut(s) 185, 371, 639, 1592, 2005, 2107, 2157, 2601, 2623
HpyCH4IV ACGT 3 cut(s) 144, 153, 2514
HpyF10VI GCNNNNNNNGC 8 cut(s) 65, 448, 1084, 2279, 2542, 2863, 2875, 2890
HpyF3I CTNAG 9 cut(s) 543, 855, 1025, 1074, 1448, 1789, 1956, 2643, 2916
HpySE526I ACGT 3 cut(s) 144, 153, 2514
Hsp92I GRCGYC 1 cut(s) 131
HspAI GCGC 4 cut(s) 202, 613, 2280, 2780
KroI GCCGGC 1 cut(s) 2782
KroNI GCCGGC 1 cut(s) 2784
Ksp22I TGATCA 1 cut(s) 1576
LmnI GCTCC 5 cut(s) 34, 92, 454, 1090, 1494
Lsp1109I GCAGC 4 cut(s) 1544, 2294, 2878, 2881
LweI GCATC 5 cut(s) 163, 1311, 1506, 2444, 2596
MaeI CTAG 2 cut(s) 911, 1998
MaeII ACGT 3 cut(s) 144, 153, 2514
MaeIII GTNAC 3 cut(s) 639, 2497, 2653
MboII GAAGA 7 cut(s) 34, 37, 40, 481, 2170, 2294, 2695
MfeI CAATTG 3 cut(s) 656, 1037, 2457
MflI RGATCY 4 cut(s) 744, 1324, 2201, 2212
MhlI GDGCHC 4 cut(s) 39, 1383, 1756, 2711
MlyI GAGTC 4 cut(s) 496, 2046, 2422, 2639
MmeI TCCRAC 3 cut(s) 1863, 2604, 2934
Mph1103I ATGCAT 1 cut(s) 2437
MroNI GCCGGC 1 cut(s) 2782
MroXI GAANNNNTTC 2 cut(s) 1175, 2687
MslI CAYNNNNRTG 4 cut(s) 183, 1416, 1916, 2337
MspA1I CMGCKG 1 cut(s) 481
MspCI CTTAAG 1 cut(s) 443
MspI CCGG 4 cut(s) 1491, 1878, 2553, 2783
MspR9I CCNGG 8 cut(s) 299, 749, 890, 1492, 1503, 1750, 1879, 2554
MunI CAATTG 3 cut(s) 656, 1037, 2457
MvaI CCWGG 5 cut(s) 299, 749, 890, 1503, 1750
MvnI CGCG 3 cut(s) 204, 615, 2260
MwoI GCNNNNNNNGC 8 cut(s) 65, 448, 1084, 2279, 2542, 2863, 2875, 2890
NaeI GCCGGC 1 cut(s) 2784
NciI CCSGG 3 cut(s) 1492, 1879, 2554
NcoI CCATGG 3 cut(s) 1812, 2037, 2164
NgoMIV GCCGGC 1 cut(s) 2782
NlaIV GGNNCC 5 cut(s) 88, 490, 1135, 1207, 1445
NmeAIII GCCGAG 3 cut(s) 63, 246, 2904
NmuCI GTSAC 2 cut(s) 639, 2497
NsiI ATGCAT 1 cut(s) 2437
NspI RCATGY 1 cut(s) 2080
PcsI WCGNNNNNNNCGW 4 cut(s) 150, 159, 168, 515
PdiI GCCGGC 1 cut(s) 2784
PdmI GAANNNNTTC 2 cut(s) 1175, 2687
PfeI GAWTC 8 cut(s) 247, 565, 1108, 1171, 1960, 2115, 2325, 2576
PflFI GACNNNGTC 3 cut(s) 221, 988, 1204
PflMI CCANNNNNTGG 1 cut(s) 935
PfoI TCCNGGA 3 cut(s) 747, 888, 1490
PkrI GCNGC 4 cut(s) 1534, 2284, 2868, 2871
PleI GAGTC 4 cut(s) 496, 2046, 2422, 2638
PpsI GAGTC 4 cut(s) 496, 2046, 2422, 2638
PpuMI RGGWCCY 2 cut(s) 1133, 1886
Psp124BI GAGCTC 1 cut(s) 39
Psp5II RGGWCCY 2 cut(s) 1133, 1886
Psp6I CCWGG 5 cut(s) 297, 747, 888, 1501, 1748
PspGI CCWGG 5 cut(s) 297, 747, 888, 1501, 1748
PspN4I GGNNCC 5 cut(s) 88, 490, 1135, 1207, 1445
PspPI GGNCC 7 cut(s) 488, 917, 1133, 1206, 1349, 1886, 2225
PspPPI RGGWCCY 2 cut(s) 1133, 1886
PsrI GAACNNNNNNTAC 2 cut(s) 296, 328
PstI CTGCAG 2 cut(s) 1236, 2425
PstNI CAGNNNCTG 1 cut(s) 1158
PsuI RGATCY 4 cut(s) 744, 1324, 2201, 2212
PsyI GACNNNGTC 3 cut(s) 221, 988, 1204
PvuII CAGCTG 1 cut(s) 481
RsaI GTAC 7 cut(s) 602, 674, 1622, 1644, 1926, 2002, 2009
RsaNI GTAC 7 cut(s) 601, 673, 1621, 1643, 1925, 2001, 2008
RseI CAYNNNNRTG 4 cut(s) 183, 1416, 1916, 2337
SacI GAGCTC 1 cut(s) 39
SalI GTCGAC 1 cut(s) 2636
SatI GCNGC 4 cut(s) 1533, 2283, 2867, 2870
Sau96I GGNCC 7 cut(s) 488, 917, 1133, 1206, 1349, 1886, 2225
SchI GAGTC 4 cut(s) 496, 2046, 2422, 2639
ScrFI CCNGG 8 cut(s) 299, 749, 890, 1492, 1503, 1750, 1879, 2554
SduI GDGCHC 4 cut(s) 39, 1383, 1756, 2711
SfaNI GCATC 5 cut(s) 163, 1311, 1506, 2444, 2596
SfcI CTRYAG 2 cut(s) 1232, 2421
SinI GGWCC 5 cut(s) 488, 1133, 1206, 1886, 2225
SmiMI CAYNNNNRTG 4 cut(s) 183, 1416, 1916, 2337
SmlI CTYRAG 3 cut(s) 443, 1376, 2540
SmoI CTYRAG 3 cut(s) 443, 1376, 2540
SpeI ACTAGT 1 cut(s) 910
SspI AATATT 1 cut(s) 933
SspMI CTAG 2 cut(s) 911, 1998
SstI GAGCTC 1 cut(s) 39
StyD4I CCNGG 8 cut(s) 297, 747, 888, 1490, 1501, 1748, 1877, 2552
StyI CCWWGG 6 cut(s) 569, 604, 1812, 2037, 2164, 2604
TaaI ACNGT 9 cut(s) 185, 371, 639, 1592, 2005, 2107, 2157, 2601, 2623
TaiI ACGT 3 cut(s) 147, 156, 2517
TaqI TCGA 5 cut(s) 162, 437, 1331, 1724, 2637
TatI WGTACW 3 cut(s) 1924, 2000, 2007
TfiI GAWTC 8 cut(s) 247, 565, 1108, 1171, 1960, 2115, 2325, 2576
TscAI CASTG 7 cut(s) 642, 958, 1542, 2010, 2160, 2506, 2924
TseFI GTSAC 2 cut(s) 639, 2497
TseI GCWGC 4 cut(s) 1532, 2282, 2866, 2869
Tsp45I GTSAC 2 cut(s) 639, 2497
TspDTI ATGAA 3 cut(s) 603, 1786, 2895
TspGWI ACGGA 4 cut(s) 47, 421, 2214, 2238
TspRI CASTG 7 cut(s) 642, 958, 1542, 2010, 2160, 2506, 2924
Tth111I GACNNNGTC 3 cut(s) 221, 988, 1204
Van91I CCANNNNNTGG 1 cut(s) 935
Vha464I CTTAAG 1 cut(s) 443
VneI GTGCAC 1 cut(s) 2707
VpaK11BI GGWCC 5 cut(s) 488, 1133, 1206, 1886, 2225
XceI RCATGY 1 cut(s) 2080
XcmI CCANNNNNNNNNTGG 3 cut(s) 295, 1123, 2623
XmiI GTMKAC 2 cut(s) 2017, 2637
XmnI GAANNNNTTC 2 cut(s) 1175, 2687
XspI CTAG 2 cut(s) 911, 1998
Zsp2I ATGCAT 1 cut(s) 2437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.