AT5G62230
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
24996129 .. 25002439
6311 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G62230.1

Sequence Viewer

Length: 2901 bp
ATGAAGGAGAAGATGCAGCGAATGGTTTTATCTTTAGCAATGGTGGGTTTTATGGTTTTTGGTGTTGCTTCGGCTATGAACAACGAAGGGAAAGCTCTGATGGCGATAAAAGGCTCTTTCAGCAACTTAGTGAATATGCTTTTGGATTGGGACGATGTTCACAACAGTGACTTGTGTTCTTGGCGAGGTGTTTTCTGCGACAACGTTAGCTACTCCGTTGTCTCTCTGAATTTGTCCAGTCTGAATCTTGGAGGGGAGATATCTCCAGCTATTGGAGACCTACGGAATTTGCAATCAATAGACTTGCAAGGTAATAAACTAGCAGGTCAAATTCCAGATGAGATTGGAAACTGTGCTTCTCTTGTTTATCTGGATTTGTCCGAGAATCTGTTATATGGAGACATACCTTTCTCAATCTCTAAACTCAAGCAGCTTGAAACTCTGAATCTGAAGAACAATCAGCTCACAGGTCCTGTACCAGCAACCTTAACCCAGATTCCAAACCTTAAGAGACTTGATCTTGCTGGCAATCATCTAACGGGTGAGATATCGAGATTGCTTTACTGGAATGAAGTTTTGCAGTATCTTGGATTACGAGGGAATATGTTGACTGGAACGTTATCTTCTGATATGTGTCAGCTAACCGGTTTGTGGTACTTTGATGTGAGAGGAAATAATCTAACTGGAACCATCCCGGAGAGCATCGGAAATTGCACAAGCTTTCAAATCCTGGACATATCTTATAATCAGATAACAGGAGAGATTCCTTACAATATCGGCTTCCTCCAAGTTGCTACTCTGTCACTTCAAGGAAACAGATTGACGGGTAGAATTCCAGAAGTTATTGGTCTAATGCAGGCTCTTGCTGTTTTGGATTTGAGTGACAATGAGCTTGTTGGTCCTATCCCACCGATACTTGGCAATCTCTCATTTACCGGAAAGTTGTATCTCCATGGCAATATGCTCACTGGTCCAATCCCCTCTGAGCTTGGGAATATGTCACGTCTCAGCTATTTGCAGCTAAACGACAATAAACTAGTGGGAACTATTCCACCTGAGCTTGGAAAGCTGGAGCAATTGTTTGAACTGAATCTTGCCAACAACCGTTTAGTAGGGCCCATACCATCCAACATTAGTTCATGTGCAGCCTTGAATCAATTCAATGTTCATGGGAACCTCTTGAGTGGATCTATTCCACTGGCGTTTCGCAATCTCGGGAGCTTGACTTATCTGAATCTTTCGTCGAACAATTTCAAGGGAAAAATACCAGTTGAGCTTGGACATATAATCAATCTTGACAAACTAGATCTGTCTGGCAATAACTTCTCAGGGTCTATACCATTAACGCTTGGCGATCTTGAACACCTTCTCATATTAAATCTTAGCAGAAACCATCTTAGTGGACAATTACCTGCAGAGTTTGGGAACCTTCGAAGCATTCAGATGATTGATGTATCATTCAATCTGCTCTCCGGAGTTATTCCAACTGAACTTGGCCAATTGCAGAATTTAAACTCTTTAATATTGAACAACAACAAGCTTCATGGGAAAATTCCAGATCAGCTTACGAACTGCTTCACTCTTGTCAATCTGAATGTCTCCTTCAACAATCTCTCCGGGATAGTCCCACCAATGAAAAACTTCTCACGTTTTGCTCCAGCCAGCTTTGTTGGAAATCCATATCTTTGTGGAAACTGGGTTGGATCTATTTGTGGTCCTTTACCGAAATCTCGAGTATTCTCCAGAGGTGCTTTGATCTGCATTGTTCTTGGCGTCATCACTCTCCTATGTATGATTTTCCTTGCAGTTTACAAATCAATGCAGCAGAAGAAGATTCTACAAGGCTCCTCAAAACAAGCTGAAGGGTTAACCAAGCTAGTGATTCTCCACATGGACATGGCAATTCATACATTTGATGATATCATGAGAGTGACTGAGAATCTTAACGAAAAGTTTATAATTGGATATGGTGCTTCTAGCACGGTATACAAATGTGCATTAAAAAGTTCCCGACCTATTGCCATTAAGCGACTCTACAATCAGTATCCGCATAACTTGCGGGAATTTGAGACAGAACTTGAGACCATTGGGAGCATTAGGCACAGAAACATAGTCAGCTTGCATGGATATGCCTTGTCTCCTACTGGCAACCTTCTTTTCTATGACTACATGGAAAATGGATCACTTTGGGACCTTCTTCATGGGTCATTGAAGAAAGTGAAGCTTGATTGGGAGACAAGGTTGAAGATAGCGGTTGGAGCTGCACAAGGACTAGCCTATCTTCACCACGATTGTACTCCTCGAATCATTCACCGTGACATCAAGTCATCGAACATACTTCTTGATGAGAATTTCGAAGCACATTTATCTGATTTCGGGATTGCTAAGAGCATACCAGCTAGCAAAACCCATGCCTCGACTTATGTTTTGGGAACAATTGGTTATATAGACCCAGAGTATGCTCGTACTTCACGAATCAATGAGAAATCCGATATATACAGCTTCGGTATTGTTCTTCTTGAGCTTCTCACTGGGAAGAAAGCAGTGGATAACGAAGCTAACTTGCATCAACTGATATTGTCAAAGGCTGATGATAATACTGTGATGGAAGCAGTTGATCCAGAGGTTACTGTGACTTGTATGGACTTGGGACATATCAGGAAGACATTTCAGCTGGCTCTCTTATGCACAAAGCGAAACCCTTTAGAGAGACCCACAATGCTTGAAGTCTCTAGGGTTCTGCTCTCTCTTGTCCCATCTCTGCAAGTAGCAAAGAAGCTACCTTCTCTTGATCACTCAACCAAAAAGCTGCAGCAAGAGAATGAAGTTAGGAATCCTGATGCAGAAGCATCTCAATGGTTTGTTCAGTTCCGTGAAGTCATCTCCAAAAGTAGCATATAA

Protein Analysis

966

Amino Acids

106.48

Weight (kDa)

6.63

Isoelectric Point (pI)

28.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 27 - 67 3.3e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 87 - 172 2.5e-06 Leucine-rich repeat region
LRR_8 PF13855 139 - 179 4.6e-07 Leucine rich repeat
LRR_14 PF23598 328 - 438 3.2e-07 Leucine-rich repeat region
LRR_8 PF13855 384 - 442 7e-06 Leucine rich repeat
LRR_14 PF23598 403 - 526 3.4e-10 Leucine-rich repeat region
LRR_8 PF13855 431 - 490 4.6e-07 Leucine rich repeat
Pkinase PF00069 652 - 910 3.4e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 653 - 913 2.9e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000383)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07180 AT5G07180 AT5G62230 AT5G62230
fragaria_vesca FvH4_7g28290 FvH4_7g28290 FvH4_7g28290 FvH4_7g28290
malus_domestica MD02G1216900.v1.1 MD07G1259500.v1.1 MD17G1114200.v1.1 MD17G1114300.v1.1
prunus_persica Prupe.2G283600_v2.0.a1
pyrus_communis pycom05g04060 pycom07g23280 pycom15g04040
rosa_chinensis RchiOBHm_Chr1g0375261 RchiOBHm_Chr2g0167851 RchiOBHm_Chr4g0390421 RchiOBHm_Chr4g0390431 RchiOBHm_Chr4g0442901 RchiOBHm_Chr4g0442981 RchiOBHm_Chr7g0228991 RchiOBHm_Chr7g0239711
rosa_laevigata RLG00000005460 RLG00000005968 RLG00000005971 RLG00000005973 RLG00000005978 RLG00000008547 RLG00000010012 RLG00000010245 RLG00000026673 RLG00000030046 RLG00000031637
rosa_multiflora Rmu_co8166860.1_g000001 Rmu_co8410161.1_g000001 Rmu_sc0000554.1_g000034 Rmu_sc0001782.1_g000050 Rmu_sc0002096.1_g000036 Rmu_sc0003006.1_g000022 Rmu_sc0003701.1_g000003 Rmu_sc0005877.1_g000004 Rmu_sc0006329.1_g000003 Rmu_sc0006695.1_g000032 Rmu_sc0008108.1_g000003 Rmu_sc0009414.1_g000003 Rmu_sc0010356.1_g000001 Rmu_sc0014119.1_g000002 Rmu_sc0014119.1_g000003 Rmu_sc0014161.1_g000004 Rmu_sc0023009.1_g000001 Rmu_sc0036835.1_g000001 Rmu_ssc0000204.1_g000009
rosa_roxburghii Rroxscaffold_1G00024810 Rroxscaffold_2G00110800 Rroxscaffold_2G00122430 Rroxscaffold_3G00261280 Rroxscaffold_4G00282890 Rroxscaffold_4G00330910 Rroxscaffold_5G00370350 Rroxscaffold_7G00161820
rosa_rugosa Rorug01G0389600 Rorug01G0389700 Rorug01G0389800 Rorug01G0389900 Rorug01G0389900 Rorug01G0390000 Rorug04G0343700 Rorug07G0155300
rosa_samantha Rh1AG400300 Rh1CG377300 Rh1DG394700 Rh2AG367100 Rh2BG612000 Rh2CG350500 Rh2DG389600 Rh3CG058100 Rh4AG396700 Rh4AG397100 Rh4AG397500 Rh4AG397600 Rh4AG397700 Rh4BG003000 Rh4BG127700 Rh4BG370500 Rh4BG393400 Rh4BG409200 Rh4CG035400 Rh4CG166700 Rh4CG408200 Rh4CG424700 Rh4DG028000 Rh4DG028100 Rh4DG403300 Rh4DG403800 Rh6DG080900 Rh7DG202700
rosa_wichuraiana Rw1G035540 Rw4G032760 Rw4G034230 Rw4G034240 Rw4G034260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 744, 1958
Acc36I ACCTGC 2 cut(s) 314, 1420
AccB7I CCANNNNNTGG 1 cut(s) 272
AccI GTMKAC 1 cut(s) 1986
AccIII TCCGGA 1 cut(s) 1472
AciI CCGC 3 cut(s) 2048, 2059, 2252
AclI AACGTT 2 cut(s) 204, 617
AclWI GGATC 4 cut(s) 1195, 1711, 2188, 2612
AcoI YGGCCR 1 cut(s) 1495
AcsI RAATTY 8 cut(s) 229, 286, 330, 831, 1507, 1551, 2063, 2350
AcuI CTGAAG 2 cut(s) 470, 1881
AcyI GRCGYC 1 cut(s) 1773
AfaI GTAC 4 cut(s) 477, 656, 2296, 2467
AfiI CCNNNNNNNGG 4 cut(s) 272, 651, 917, 1061
AflII CTTAAG 1 cut(s) 506
AgeI ACCGGT 1 cut(s) 644
AhdI GACNNNNNGTC 1 cut(s) 2323
AhlI ACTAGT 1 cut(s) 1036
AjiI CACGTC 1 cut(s) 1004
AjnI CCWGG 1 cut(s) 729
AjuI GAANNNNNNNTTGG 2 cut(s) 125, 157
AleI CACNNNNGTG 1 cut(s) 165
AlwI GGATC 4 cut(s) 1195, 1711, 2188, 2612
AlwNI CAGNNNCTG 1 cut(s) 473
Ama87I CYCGRG 2 cut(s) 1214, 1731
Aor13HI TCCGGA 1 cut(s) 1472
AoxI GGCC 2 cut(s) 1115, 1495
ApaI GGGCCC 1 cut(s) 1119
ApeKI GCWGC 8 cut(s) 16, 430, 1018, 1145, 1822, 2261, 2809, 2812
ApoI RAATTY 8 cut(s) 229, 286, 330, 831, 1507, 1551, 2063, 2350
ArsI GACNNNNNNTTYG 2 cut(s) 2410, 2442
AsiGI ACCGGT 1 cut(s) 644
Asp700I GAANNNNTTC 5 cut(s) 1157, 1250, 1365, 1574, 1640
AspS9I GGNCC 7 cut(s) 470, 899, 971, 1115, 1116, 1715, 2191
AsuC2I CCSGG 2 cut(s) 695, 1618
AsuHPI GGTGA 3 cut(s) 554, 2276, 2303
AsuII TTCGAA 2 cut(s) 1432, 2355
AsuNHI GCTAGC 1 cut(s) 2399
AvaI CYCGRG 2 cut(s) 1214, 1731
AvaII GGWCC 5 cut(s) 470, 899, 971, 1715, 2191
BaeGI GKGCMC 1 cut(s) 1119
BalI TGGCCA 1 cut(s) 1497
BanII GRGCYC 1 cut(s) 1119
BbsI GAAGAC 1 cut(s) 2669
BbvI GCAGC 8 cut(s) 28, 442, 1030, 1157, 1834, 2248, 2796, 2824
BccI CCATC 6 cut(s) 94, 698, 1132, 1401, 2599, 2764
BciT130I CCWGG 1 cut(s) 731
BciVI GTATCC 1 cut(s) 2055
BclI TGATCA 1 cut(s) 2791
BcnI CCSGG 2 cut(s) 695, 1618
BcuI ACTAGT 1 cut(s) 1036
BfaI CTAG 8 cut(s) 320, 1037, 1304, 1877, 1977, 2273, 2400, 2733
BfmI CTRYAG 2 cut(s) 1413, 2810
BfrI CTTAAG 1 cut(s) 506
BfuAI ACCTGC 2 cut(s) 314, 1420
BfuI GTATCC 1 cut(s) 2055
BglII AGATCT 1 cut(s) 1306
BisI GCNGC 8 cut(s) 17, 431, 1019, 1146, 1823, 2262, 2810, 2813
BlsI GCNGC 8 cut(s) 18, 432, 1020, 1147, 1824, 2263, 2811, 2814
Bme1390I CCNGG 3 cut(s) 695, 731, 1618
Bme18I GGWCC 5 cut(s) 470, 899, 971, 1715, 2191
BmeRI GACNNNNNGTC 1 cut(s) 2323
BmeT110I CYCGRG 2 cut(s) 1214, 1731
BmgBI CACGTC 1 cut(s) 1004
BmgT120I GGNCC 7 cut(s) 470, 899, 971, 1115, 1116, 1715, 2191
BmiI GGNNCC 6 cut(s) 688, 1117, 1175, 1427, 1846, 2192
BmrFI CCNGG 3 cut(s) 695, 731, 1618
BmrI ACTGGG 2 cut(s) 1705, 2541
BmsI GCATC 5 cut(s) 3, 711, 2575, 2830, 2858
BmtI GCTAGC 1 cut(s) 2403
BmuI ACTGGG 2 cut(s) 1705, 2541
BpiI GAAGAC 1 cut(s) 2669
BpmI CTGGAG 4 cut(s) 249, 1091, 1641, 1726
Bpu10I CCTNAGC 1 cut(s) 1056
Bpu14I TTCGAA 2 cut(s) 1432, 2355
BpuEI CTTGAG 4 cut(s) 410, 1201, 2099, 2540
BpuMI CCSGG 2 cut(s) 695, 1618
BsaHI GRCGYC 1 cut(s) 1773
BsaI GGTCTC 3 cut(s) 270, 2075, 2704
BsaJI CCNNGG 1 cut(s) 952
BsaWI WCCGGW 3 cut(s) 644, 935, 1472
BsaXI ACNNNNNCTCC 6 cut(s) 1064, 1094, 1598, 1628, 2225, 2255
Bsc4I CCNNNNNNNGG 4 cut(s) 272, 651, 917, 1061
Bse118I RCCGGY 1 cut(s) 644
Bse3DI GCAATG 1 cut(s) 45
BseAI TCCGGA 1 cut(s) 1472
BseBI CCWGG 1 cut(s) 731
BseDI CCNNGG 1 cut(s) 952
BseGI GGATG 2 cut(s) 690, 1124
BseLI CCNNNNNNNGG 4 cut(s) 272, 651, 917, 1061
BseMI GCAATG 1 cut(s) 45
BseMII CTCAG 5 cut(s) 975, 1021, 1047, 1341, 1926
BseRI GAGGAG 2 cut(s) 1837, 2289
BseSI GKGCMC 1 cut(s) 1119
BseXI GCAGC 8 cut(s) 28, 442, 1030, 1157, 1834, 2248, 2796, 2824
BsgI GTGCAG 2 cut(s) 1164, 2247
BshFI GGCC 2 cut(s) 1117, 1497
BshTI ACCGGT 1 cut(s) 644
BsiHKCI CYCGRG 2 cut(s) 1214, 1731
BsiSI CCGG 5 cut(s) 645, 695, 936, 1473, 1617
BslFI GGGAC 5 cut(s) 164, 1610, 2204, 2664, 2738
BslI CCNNNNNNNGG 4 cut(s) 272, 651, 917, 1061
BsmBI CGTCTC 1 cut(s) 1010
BsmFI GGGAC 5 cut(s) 164, 1610, 2204, 2664, 2738
BsmI GAATGC 1 cut(s) 1437
BsnI GGCC 2 cut(s) 1117, 1497
Bso31I GGTCTC 3 cut(s) 270, 2075, 2704
BsoBI CYCGRG 2 cut(s) 1214, 1731
Bsp119I TTCGAA 2 cut(s) 1432, 2355
Bsp120I GGGCCC 1 cut(s) 1115
Bsp1286I GDGCHC 1 cut(s) 1119
Bsp13I TCCGGA 1 cut(s) 1472
Bsp19I CCATGG 1 cut(s) 952
BspACI CCGC 3 cut(s) 2048, 2059, 2252
BspANI GGCC 2 cut(s) 1117, 1497
BspCNI CTCAG 5 cut(s) 976, 1020, 1048, 1340, 1927
BspEI TCCGGA 1 cut(s) 1472
BspHI TCATGA 1 cut(s) 1923
BspLI GGNNCC 6 cut(s) 688, 1117, 1175, 1427, 1846, 2192
BspMAI CTGCAG 2 cut(s) 1417, 2814
BspMI ACCTGC 2 cut(s) 314, 1420
BspOI GCTAGC 1 cut(s) 2403
BspPI GGATC 4 cut(s) 1195, 1711, 2188, 2612
BspT104I TTCGAA 2 cut(s) 1432, 2355
BspTI CTTAAG 1 cut(s) 506
BspTNI GGTCTC 3 cut(s) 270, 2075, 2704
BsrDI GCAATG 1 cut(s) 45
BsrFI RCCGGY 1 cut(s) 644
BssAI RCCGGY 1 cut(s) 644
BssECI CCNNGG 1 cut(s) 952
BssNAI GTATAC 1 cut(s) 1987
BssNI GRCGYC 1 cut(s) 1773
BssT1I CCWWGG 1 cut(s) 952
Bst1107I GTATAC 1 cut(s) 1987
Bst2UI CCWGG 1 cut(s) 731
Bst4CI ACNGT 7 cut(s) 167, 353, 1106, 1984, 2315, 2602, 2632
BstACI GRCGYC 1 cut(s) 1773
BstAFI CTTAAG 1 cut(s) 506
BstAPI GCANNNNNTGC 1 cut(s) 2056
BstBI TTCGAA 2 cut(s) 1432, 2355
BstC8I GCNNGC 6 cut(s) 526, 858, 1663, 2120, 2401, 2676
BstDEI CTNAG 9 cut(s) 127, 984, 1007, 1056, 1327, 1382, 1397, 1935, 2385
BstDSI CCRYGG 1 cut(s) 952
BstF5I GGATG 2 cut(s) 690, 1124
BstMWI GCNNNNNNNGC 5 cut(s) 101, 120, 1066, 2056, 2258
BstNI CCWGG 1 cut(s) 731
BstSCI CCNGG 3 cut(s) 693, 729, 1616
BstSFI CTRYAG 2 cut(s) 1413, 2810
BstSLI GKGCMC 1 cut(s) 1119
BstV1I GCAGC 8 cut(s) 28, 442, 1030, 1157, 1834, 2248, 2796, 2824
BstV2I GAAGAC 1 cut(s) 2669
BstX2I RGATCY 3 cut(s) 1187, 1306, 1703
BstXI CCANNNNNNTGG 1 cut(s) 1400
BstYI RGATCY 3 cut(s) 1187, 1306, 1703
BstZ17I GTATAC 1 cut(s) 1987
BsuI GTATCC 1 cut(s) 2055
BsuRI GGCC 2 cut(s) 1117, 1497
BtgI CCRYGG 1 cut(s) 952
BtrI CACGTC 1 cut(s) 1004
BtsCI GGATG 2 cut(s) 690, 1124
BtsI GCAGTG 1 cut(s) 2550
BtsIMutI CAGTG 5 cut(s) 172, 966, 1196, 2529, 2550
BveI ACCTGC 2 cut(s) 314, 1420
Cac8I GCNNGC 6 cut(s) 526, 858, 1663, 2120, 2401, 2676
CaiI CAGNNNCTG 1 cut(s) 473
CciI TCATGA 1 cut(s) 1923
Cfr10I RCCGGY 1 cut(s) 644
Cfr13I GGNCC 7 cut(s) 470, 899, 971, 1115, 1116, 1715, 2191
CseI GACGC 1 cut(s) 1762
Csp6I GTAC 4 cut(s) 476, 655, 2295, 2466
CspAI ACCGGT 1 cut(s) 644
CspCI CAANNNNNGTGG 2 cut(s) 2704, 2739
CviQI GTAC 4 cut(s) 476, 655, 2295, 2466
DdeI CTNAG 9 cut(s) 127, 984, 1007, 1056, 1327, 1382, 1397, 1935, 2385
DraI TTTAAA 1 cut(s) 1512
DriI GACNNNNNGTC 1 cut(s) 2323
EaeI YGGCCR 1 cut(s) 1495
Eam1105I GACNNNNNGTC 1 cut(s) 2323
Eco130I CCWWGG 1 cut(s) 952
Eco24I GRGCYC 1 cut(s) 1119
Eco31I GGTCTC 3 cut(s) 270, 2075, 2704
Eco32I GATATC 3 cut(s) 261, 549, 1921
Eco47I GGWCC 5 cut(s) 470, 899, 971, 1715, 2191
Eco57I CTGAAG 2 cut(s) 470, 1881
Eco88I CYCGRG 2 cut(s) 1214, 1731
EcoO109I RGGNCCY 3 cut(s) 470, 1115, 2191
EcoRI GAATTC 1 cut(s) 831
EcoRII CCWGG 1 cut(s) 729
EcoRV GATATC 3 cut(s) 261, 549, 1921
EcoT14I CCWWGG 1 cut(s) 952
EcoT38I GRGCYC 1 cut(s) 1119
ErhI CCWWGG 1 cut(s) 952
Esp3I CGTCTC 1 cut(s) 1010
FalI AAGNNNNNCTT 2 cut(s) 2208, 2240
FaqI GGGAC 5 cut(s) 164, 1610, 2204, 2664, 2738
FauI CCCGC 1 cut(s) 2052
FbaI TGATCA 1 cut(s) 2791
FblI GTMKAC 1 cut(s) 1986
Fnu4HI GCNGC 8 cut(s) 17, 431, 1019, 1146, 1823, 2262, 2810, 2813
FokI GGATG 2 cut(s) 677, 1111
FriOI GRGCYC 1 cut(s) 1119
Fsp4HI GCNGC 8 cut(s) 17, 431, 1019, 1146, 1823, 2262, 2810, 2813
FspBI CTAG 8 cut(s) 320, 1037, 1304, 1877, 1977, 2273, 2400, 2733
GluI GCNGC 8 cut(s) 17, 431, 1019, 1146, 1823, 2262, 2810, 2813
GsuI CTGGAG 4 cut(s) 249, 1091, 1641, 1726
HaeIII GGCC 2 cut(s) 1117, 1497
HapII CCGG 5 cut(s) 645, 695, 936, 1473, 1617
HgaI GACGC 1 cut(s) 1762
Hin1I GRCGYC 1 cut(s) 1773
HincII GTYRAC 2 cut(s) 609, 1869
HindII GTYRAC 2 cut(s) 609, 1869
HindIII AAGCTT 3 cut(s) 718, 1538, 2222
HpaI GTTAAC 1 cut(s) 1869
HpaII CCGG 5 cut(s) 645, 695, 936, 1473, 1617
HphI GGTGA 3 cut(s) 554, 2276, 2303
Hpy166II GTNNAC 6 cut(s) 160, 609, 1403, 1810, 1869, 1987
Hpy8I GTNNAC 6 cut(s) 160, 609, 1403, 1810, 1869, 1987
Hpy99I CGWCG 1 cut(s) 1246
HpyAV CCTTC 8 cut(s) 80, 1376, 1439, 1612, 1856, 2162, 2204, 2793
HpyCH4III ACNGT 7 cut(s) 167, 353, 1106, 1984, 2315, 2602, 2632
HpyCH4IV ACGT 4 cut(s) 204, 617, 1003, 1648
HpyF10VI GCNNNNNNNGC 5 cut(s) 101, 120, 1066, 2056, 2258
HpyF3I CTNAG 9 cut(s) 127, 984, 1007, 1056, 1327, 1382, 1397, 1935, 2385
HpySE526I ACGT 4 cut(s) 204, 617, 1003, 1648
Hsp92I GRCGYC 1 cut(s) 1773
Kpn2I TCCGGA 1 cut(s) 1472
Ksp22I TGATCA 1 cut(s) 2791
KspAI GTTAAC 1 cut(s) 1869
LmnI GCTCC 6 cut(s) 1072, 1218, 1660, 1850, 2091, 2258
Lsp1109I GCAGC 8 cut(s) 28, 442, 1030, 1157, 1834, 2248, 2796, 2824
LweI GCATC 5 cut(s) 3, 711, 2575, 2830, 2858
MaeI CTAG 8 cut(s) 320, 1037, 1304, 1877, 1977, 2273, 2400, 2733
MaeII ACGT 4 cut(s) 204, 617, 1003, 1648
MaeIII GTNAC 8 cut(s) 167, 801, 881, 999, 1930, 2315, 2626, 2632
MfeI CAATTG 3 cut(s) 1076, 1499, 2436
MflI RGATCY 3 cut(s) 1187, 1306, 1703
MhlI GDGCHC 1 cut(s) 1119
MlsI TGGCCA 1 cut(s) 1497
MluNI TGGCCA 1 cut(s) 1497
MlyI GAGTC 1 cut(s) 2025
MmeI TCCRAC 5 cut(s) 1152, 1508, 1651, 1681, 2236
Mox20I TGGCCA 1 cut(s) 1497
MroI TCCGGA 1 cut(s) 1472
MroXI GAANNNNTTC 5 cut(s) 1157, 1250, 1365, 1574, 1640
MscI TGGCCA 1 cut(s) 1497
MslI CAYNNNNRTG 7 cut(s) 165, 1398, 1442, 1895, 1928, 2127, 2854
Msp20I TGGCCA 1 cut(s) 1497
MspA1I CMGCKG 1 cut(s) 2674
MspCI CTTAAG 1 cut(s) 506
MspI CCGG 5 cut(s) 645, 695, 936, 1473, 1617
MspR9I CCNGG 3 cut(s) 695, 731, 1618
MunI CAATTG 3 cut(s) 1076, 1499, 2436
Mva1269I GAATGC 1 cut(s) 1437
MvaI CCWGG 1 cut(s) 731
MwoI GCNNNNNNNGC 5 cut(s) 101, 120, 1066, 2056, 2258
NciI CCSGG 2 cut(s) 695, 1618
NcoI CCATGG 1 cut(s) 952
NheI GCTAGC 1 cut(s) 2399
NlaIV GGNNCC 6 cut(s) 688, 1117, 1175, 1427, 1846, 2192
NmuCI GTSAC 7 cut(s) 167, 801, 881, 999, 1930, 2315, 2632
NspV TTCGAA 2 cut(s) 1432, 2355
OliI CACNNNNGTG 1 cut(s) 165
PaeR7I CTCGAG 1 cut(s) 1731
PagI TCATGA 1 cut(s) 1923
PcsI WCGNNNNNNNCGW 1 cut(s) 2470
PctI GAATGC 1 cut(s) 1437
PdmI GAANNNNTTC 5 cut(s) 1157, 1250, 1365, 1574, 1640
PflMI CCANNNNNTGG 1 cut(s) 272
PfoI TCCNGGA 3 cut(s) 693, 729, 1616
PinAI ACCGGT 1 cut(s) 644
PkrI GCNGC 8 cut(s) 18, 432, 1020, 1147, 1824, 2263, 2811, 2814
PleI GAGTC 1 cut(s) 2025
PpsI GAGTC 1 cut(s) 2025
PpuMI RGGWCCY 2 cut(s) 470, 2191
PsiI TTATAA 2 cut(s) 744, 1958
Psp1406I AACGTT 2 cut(s) 204, 617
Psp5II RGGWCCY 2 cut(s) 470, 2191
Psp6I CCWGG 1 cut(s) 729
PspGI CCWGG 1 cut(s) 729
PspN4I GGNNCC 6 cut(s) 688, 1117, 1175, 1427, 1846, 2192
PspOMI GGGCCC 1 cut(s) 1115
PspPI GGNCC 7 cut(s) 470, 899, 971, 1115, 1116, 1715, 2191
PspPPI RGGWCCY 2 cut(s) 470, 2191
PstI CTGCAG 2 cut(s) 1417, 2814
PstNI CAGNNNCTG 1 cut(s) 473
PsuI RGATCY 3 cut(s) 1187, 1306, 1703
PvuII CAGCTG 1 cut(s) 2674
RsaI GTAC 4 cut(s) 477, 656, 2296, 2467
RsaNI GTAC 4 cut(s) 476, 655, 2295, 2466
RseI CAYNNNNRTG 7 cut(s) 165, 1398, 1442, 1895, 1928, 2127, 2854
SatI GCNGC 8 cut(s) 17, 431, 1019, 1146, 1823, 2262, 2810, 2813
Sau96I GGNCC 7 cut(s) 470, 899, 971, 1115, 1116, 1715, 2191
SchI GAGTC 1 cut(s) 2025
ScrFI CCNGG 3 cut(s) 695, 731, 1618
SduI GDGCHC 1 cut(s) 1119
SfaNI GCATC 5 cut(s) 3, 711, 2575, 2830, 2858
SfcI CTRYAG 2 cut(s) 1413, 2810
Sfr274I CTCGAG 1 cut(s) 1731
SfuI TTCGAA 2 cut(s) 1432, 2355
SinI GGWCC 5 cut(s) 470, 899, 971, 1715, 2191
SlaI CTCGAG 1 cut(s) 1731
SmiMI CAYNNNNRTG 7 cut(s) 165, 1398, 1442, 1895, 1928, 2127, 2854
SmlI CTYRAG 6 cut(s) 425, 506, 1180, 1731, 2078, 2519
SmoI CTYRAG 6 cut(s) 425, 506, 1180, 1731, 2078, 2519
SpeI ACTAGT 1 cut(s) 1036
SsiI CCGC 3 cut(s) 2048, 2059, 2252
SspI AATATT 1 cut(s) 1524
SspMI CTAG 8 cut(s) 320, 1037, 1304, 1877, 1977, 2273, 2400, 2733
StyD4I CCNGG 3 cut(s) 693, 729, 1616
StyI CCWWGG 1 cut(s) 952
TaaI ACNGT 7 cut(s) 167, 353, 1106, 1984, 2315, 2602, 2632
TaiI ACGT 4 cut(s) 207, 620, 1006, 1651
TaqI TCGA 8 cut(s) 551, 1244, 1432, 1732, 2302, 2330, 2355, 2417
TatI WGTACW 1 cut(s) 2294
TscAI CASTG 5 cut(s) 172, 973, 1203, 2536, 2550
TseFI GTSAC 7 cut(s) 167, 801, 881, 999, 1930, 2315, 2632
TseI GCWGC 8 cut(s) 16, 430, 1018, 1145, 1822, 2261, 2809, 2812
Tsp45I GTSAC 7 cut(s) 167, 801, 881, 999, 1930, 2315, 2632
TspGWI ACGGA 3 cut(s) 205, 298, 2861
TspRI CASTG 5 cut(s) 172, 973, 1203, 2536, 2550
Van91I CCANNNNNTGG 1 cut(s) 272
Vha464I CTTAAG 1 cut(s) 506
VpaK11BI GGWCC 5 cut(s) 470, 899, 971, 1715, 2191
XapI RAATTY 8 cut(s) 229, 286, 330, 831, 1507, 1551, 2063, 2350
XhoI CTCGAG 1 cut(s) 1731
XmiI GTMKAC 1 cut(s) 1986
XmnI GAANNNNTTC 5 cut(s) 1157, 1250, 1365, 1574, 1640
XspI CTAG 8 cut(s) 320, 1037, 1304, 1877, 1977, 2273, 2400, 2733
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.