FvH4_1g29863

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
23527754 .. 23535541
7788 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g29863.t1

Sequence Viewer

Length: 2127 bp
ATGATCTCACTGGATCACTACAAGGAGACTTTGGCTCATTTCAAGTCCGCAATATTCATACTTTTGGAGGTTTTGTTGTCCACTTTGGCTCCTATTCAGGAAAGCTCCAAGGGCATGGCAAACTCTCCGGGTGAAAAAGTGTCCCATCTAGTCCATGCTCAGCCCTATCATCAACAACTCTTCTGGATTCGTATACGAGGGATACCACCCTTCTACTTAGAGGATGAGAGACGAGAGGAGATTGAGAAATGCATTGGAGGTGCGATAGGAACTCATGTTCGCTCCTTGAGAGGCCGCGGTGGTGGTTTGTTAGGTAGCTTTCTGAGGATCAGGGTAGGAGTAACTATTGTAGAACCTTTGAAGAGGCATATTAACTTCAGACCGGTAGGAGAATCAATTGGTCGTCAATATGACCTAGAATATGAACACTTGCCCCATTTCTGTTTGTTCTGTGGATTGCTTGACCACGCAGGGAATGCTTGTCCAATGAAAGCAGCTGGTATTATTTTTGAACCAATCTTCTCAACGCTGAGAAGGAGGAATGGTTACGTTCAAAGCTTGCTTCAGAGGAGGAGGAAGAATTCGGTGCCGGAGAGGGATTCAAAGAATGCAATAGAAATAGAAGGAAGTGAGATATCTGATGAGGGAAAAGTTGGATCGGTAAAAAAACGCCGGAAATTAATTTCCAGTGCGGCGGAGCTGGGAGATCCAATGGTGGCGACCGAAGGTCCGAATTTGGAAGTTCCTTCACCTTCATTGGCATTAACTAAGGGTGCAAATTCTGGGGTCAATAAAAAGAAAGCTTTTACAGCAAGCAAGATTCGAAGGGATAGACAGCTTGAGGTGAGGGCCAACAAATCAGGGATTAGAGTTTCAAAAAAGTCAAATAAGGAGCCCGTGAATGATGAGCTAAAGAGTGGGCCTCGGGCCGCATTCTCTAGAGCCAAGTTCAGGTCCAAGACTAATAGCCCTTCCCCGAAGAAGAAAGGTTACGTGATGAGCAAGGAAGGTCGCTCGTTCTCGCCGGACCGAATTGCTTTCGTCGGGACAGTCGCTCGTTCTCACCGGACCGAATTCAAAGGCAAGAACTACCAAGACGAACAGGTGCCTCAATCAAGCCAGCAGGAAGAAGAACAATTGATATTAATGTCTGGAAATTTGAGAGCTCTGATGAGAGATTTGGAGAGGAAGCAACCTGAAAAAACCTTGAAGGAGAAGCTTGAAAAACTTACAAAAGCAAATGAAGAGCTCCTGGAAAAGAATGCACAACTGTTGACTAAGATGCAAATGGTAGTAGCAGCTCCAAATGAACACCTTGAGAAGAATGAACCAAATACAGTTGACGCACATTCTCGAGCTCGTCAGACTTCAACACCTGAAGATTCATGTGGAGCAACACCTGCAATACCAATCCAAACGATTGTGATGGGATATGGTGCAGAACAAGAAGAATCGACTATGTGTCAAGAAATAATTCAGACAGTGGTCATGGACATAGTGAAGCAGCAGCAACAACAAGAAAAGGTGAAGGAAAATGAAAGTCTGAAGACATATAAGAAGAAGCCGTGGGTCTACATTGAACAGACTGAAGAAGAAATCAATTCTTCCATGGATGATTTTGTTTCTGTTGTTGAGAAAGAAGAAGCACGAGTAAAGAAGAAAGTTGTTCAGCCCCTTTCGATAGAGAGAAATGTGAAGGTTAACAAAAGGGATGCAACAAAAAAGCAACAAGAAGAATGGGAGTATGGCACACCTGAAGACCTTAAGCCAAAGAAGAACCAACCAGCCAGAAGGAACATATCCAAAAATCACAACATAGTTATTGACAAAGTCAAATGCACAACGCAGACATGGACGACTCTAGAAAAGGACGTGGCAATGCATTATGAGAGCTGGTTCAAAACAAATCAAGAAGCAAACAAAGACTATGTATATTGGCAAGATCCTTCTTTAATAGTTCAGATCACAAAGGAGGACTTGAAGACAATAATAGAGGAAGGAGAGCTTACAACTGATGTTCTCAAGATTTATATTCAAATGTTAAAGGAAAAAGCAAAGAGGTCAGGCATCCGAGTGGGATTCCTTGATGTGGAAGCAGCTGTAAGTAAAACTACCACACCTTTGTAA

Protein Analysis

709

Amino Acids

80.34

Weight (kDa)

9.29

Isoelectric Point (pI)

57.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1408
Acc36I ACCTGC 1 cut(s) 1408
AccB1I GGYRCC 2 cut(s) 586, 1105
AccI GTMKAC 2 cut(s) 193, 1572
AccII CGCG 1 cut(s) 297
AciI CCGC 6 cut(s) 48, 295, 297, 692, 695, 930
AclWI GGATC 5 cut(s) 21, 335, 664, 701, 1937
AcsI RAATTY 5 cut(s) 580, 733, 778, 1073, 1156
AcuI CTGAAG 6 cut(s) 361, 548, 1398, 1565, 1608, 1776
AfiI CCNNNNNNNGG 2 cut(s) 951, 2089
AflII CTTAAG 1 cut(s) 1763
AgeI ACCGGT 1 cut(s) 382
AhdI GACNNNNNGTC 2 cut(s) 726, 1461
AjiI CACGTC 1 cut(s) 1873
AjnI CCWGG 1 cut(s) 1251
AloI GAACNNNNNNTCC 2 cut(s) 261, 293
Alw21I GWGCWC 3 cut(s) 1168, 1251, 1360
Alw26I GTCTC 2 cut(s) 20, 223
AlwI GGATC 5 cut(s) 21, 335, 664, 701, 1937
Ama87I CYCGRG 2 cut(s) 924, 1353
AoxI GGCC 4 cut(s) 292, 849, 920, 927
ApeKI GCWGC 5 cut(s) 494, 1298, 1504, 1507, 2096
ApoI RAATTY 5 cut(s) 580, 733, 778, 1073, 1156
AseI ATTAAT 2 cut(s) 680, 1145
AsiGI ACCGGT 1 cut(s) 382
Asp700I GAANNNNTTC 1 cut(s) 1473
AspS9I GGNCC 7 cut(s) 728, 849, 920, 927, 954, 1027, 1068
AsuC2I CCSGG 1 cut(s) 129
AsuHPI GGTGA 5 cut(s) 143, 741, 856, 1055, 1537
AsuII TTCGAA 1 cut(s) 823
AvaI CYCGRG 2 cut(s) 924, 1353
AvaII GGWCC 4 cut(s) 728, 954, 1027, 1068
BanI GGYRCC 2 cut(s) 586, 1105
BanII GRGCYC 4 cut(s) 897, 1168, 1251, 1360
BarI GAAGNNNNNNTAC 2 cut(s) 974, 1006
BauI CACGAG 1 cut(s) 1647
BbsI GAAGAC 3 cut(s) 1553, 1764, 1988
Bbv12I GWGCWC 3 cut(s) 1168, 1251, 1360
BbvI GCAGC 5 cut(s) 506, 1310, 1516, 1519, 2108
BccI CCATC 2 cut(s) 153, 1420
BceAI ACGGC 1 cut(s) 1549
BciT130I CCWGG 1 cut(s) 1253
BciVI GTATCC 1 cut(s) 195
BcnI CCSGG 1 cut(s) 129
BcoDI GTCTC 2 cut(s) 20, 223
BfaI CTAG 4 cut(s) 149, 416, 939, 1862
BfrI CTTAAG 1 cut(s) 1763
BfuAI ACCTGC 1 cut(s) 1408
BfuI GTATCC 1 cut(s) 195
BisI GCNGC 8 cut(s) 295, 495, 693, 930, 1299, 1505, 1508, 2097
BlpI GCTNAGC 1 cut(s) 159
BlsI GCNGC 8 cut(s) 296, 496, 694, 931, 1300, 1506, 1509, 2098
Bme1390I CCNGG 2 cut(s) 129, 1253
Bme18I GGWCC 4 cut(s) 728, 954, 1027, 1068
BmeRI GACNNNNNGTC 2 cut(s) 726, 1461
BmeT110I CYCGRG 2 cut(s) 924, 1353
BmgBI CACGTC 1 cut(s) 1873
BmgT120I GGNCC 7 cut(s) 728, 849, 920, 927, 954, 1027, 1068
BmiI GGNNCC 4 cut(s) 90, 588, 894, 1107
BmrFI CCNGG 2 cut(s) 129, 1253
BmsI GCATC 3 cut(s) 1272, 1702, 2076
BoxI GACNNNNGTC 1 cut(s) 1484
BpiI GAAGAC 3 cut(s) 1553, 1764, 1988
BplI GAGNNNNNCTC 2 cut(s) 907, 939
Bpu1102I GCTNAGC 1 cut(s) 159
Bpu14I TTCGAA 1 cut(s) 823
BpuEI CTTGAG 4 cut(s) 307, 860, 1337, 2006
BpuMI CCSGG 1 cut(s) 129
BsaAI YACGTR 1 cut(s) 994
BsaJI CCNNGG 5 cut(s) 108, 295, 923, 1565, 1608
BsaWI WCCGGW 2 cut(s) 382, 1065
BsaXI ACNNNNNCTCC 6 cut(s) 59, 73, 89, 103, 529, 559
Bsc4I CCNNNNNNNGG 2 cut(s) 951, 2089
Bse118I RCCGGY 1 cut(s) 382
Bse1I ACTGG 2 cut(s) 15, 687
Bse3DI GCAATG 1 cut(s) 1884
BseBI CCWGG 1 cut(s) 1253
BseDI CCNNGG 5 cut(s) 108, 295, 923, 1565, 1608
BseGI GGATG 4 cut(s) 229, 1618, 1717, 2067
BseLI CCNNNNNNNGG 2 cut(s) 951, 2089
BseMI GCAATG 1 cut(s) 1884
BseMII CTCAG 3 cut(s) 173, 314, 521
BseNI ACTGG 2 cut(s) 15, 687
BseRI GAGGAG 3 cut(s) 251, 583, 586
BseXI GCAGC 5 cut(s) 506, 1310, 1516, 1519, 2108
BseYI CCCAGC 1 cut(s) 700
BsgI GTGCAG 1 cut(s) 1458
Bsh1236I CGCG 1 cut(s) 297
Bsh1285I CGRYCG 1 cut(s) 723
BshFI GGCC 4 cut(s) 294, 851, 922, 929
BshNI GGYRCC 2 cut(s) 586, 1105
BshTI ACCGGT 1 cut(s) 382
BsiEI CGRYCG 1 cut(s) 723
BsiHKAI GWGCWC 3 cut(s) 1168, 1251, 1360
BsiHKCI CYCGRG 2 cut(s) 924, 1353
BsiSI CCGG 6 cut(s) 128, 383, 590, 673, 1025, 1066
BslFI GGGAC 2 cut(s) 127, 1060
BslI CCNNNNNNNGG 2 cut(s) 951, 2089
BsmAI GTCTC 2 cut(s) 20, 223
BsmBI CGTCTC 1 cut(s) 223
BsmFI GGGAC 2 cut(s) 127, 1060
BsmI GAATGC 4 cut(s) 481, 613, 932, 1267
BsnI GGCC 4 cut(s) 294, 851, 922, 929
BsoBI CYCGRG 2 cut(s) 924, 1353
Bsp119I TTCGAA 1 cut(s) 823
Bsp1286I GDGCHC 4 cut(s) 897, 1168, 1251, 1360
Bsp143I GATC 7 cut(s) 3, 13, 327, 656, 706, 1942, 1962
Bsp1720I GCTNAGC 1 cut(s) 159
Bsp19I CCATGG 1 cut(s) 1608
BspACI CCGC 6 cut(s) 48, 295, 297, 692, 695, 930
BspANI GGCC 4 cut(s) 294, 851, 922, 929
BspCNI CTCAG 3 cut(s) 172, 315, 522
BspFNI CGCG 1 cut(s) 297
BspLI GGNNCC 4 cut(s) 90, 588, 894, 1107
BspMI ACCTGC 1 cut(s) 1408
BspPI GGATC 5 cut(s) 21, 335, 664, 701, 1937
BspQI GCTCTTC 1 cut(s) 1239
BspT104I TTCGAA 1 cut(s) 823
BspT107I GGYRCC 2 cut(s) 586, 1105
BspTI CTTAAG 1 cut(s) 1763
BsrDI GCAATG 1 cut(s) 1884
BsrFI RCCGGY 1 cut(s) 382
BsrI ACTGG 2 cut(s) 15, 687
BssAI RCCGGY 1 cut(s) 382
BssECI CCNNGG 5 cut(s) 108, 295, 923, 1565, 1608
BssMI GATC 7 cut(s) 3, 13, 327, 656, 706, 1942, 1962
BssNAI GTATAC 1 cut(s) 194
BssSI CACGAG 1 cut(s) 1647
BssT1I CCWWGG 2 cut(s) 108, 1608
Bst1107I GTATAC 1 cut(s) 194
Bst2BI CACGAG 1 cut(s) 1647
Bst2UI CCWGG 1 cut(s) 1253
Bst4CI ACNGT 4 cut(s) 1051, 1272, 1339, 1483
Bst6I CTCTTC 3 cut(s) 185, 356, 1239
BstAFI CTTAAG 1 cut(s) 1763
BstAPI GCANNNNNTGC 2 cut(s) 476, 1400
BstBAI YACGTR 1 cut(s) 994
BstBI TTCGAA 1 cut(s) 823
BstC8I GCNNGC 3 cut(s) 560, 814, 1121
BstDEI CTNAG 6 cut(s) 159, 217, 323, 530, 768, 1278
BstDSI CCRYGG 3 cut(s) 295, 1565, 1608
BstF5I GGATG 4 cut(s) 229, 1618, 1717, 2067
BstFNI CGCG 1 cut(s) 297
BstKTI GATC 7 cut(s) 6, 16, 330, 659, 709, 1945, 1965
BstMAI GTCTC 2 cut(s) 20, 223
BstMBI GATC 7 cut(s) 3, 13, 327, 656, 706, 1942, 1962
BstMCI CGRYCG 1 cut(s) 723
BstMWI GCNNNNNNNGC 4 cut(s) 111, 476, 809, 1400
BstNI CCWGG 1 cut(s) 1253
BstPAI GACNNNNGTC 1 cut(s) 1484
BstSCI CCNGG 2 cut(s) 127, 1251
BstUI CGCG 1 cut(s) 297
BstV1I GCAGC 5 cut(s) 506, 1310, 1516, 1519, 2108
BstV2I GAAGAC 3 cut(s) 1553, 1764, 1988
BstX2I RGATCY 2 cut(s) 706, 1942
BstXI CCANNNNNNTGG 1 cut(s) 115
BstYI RGATCY 2 cut(s) 706, 1942
BstZ17I GTATAC 1 cut(s) 194
BsuI GTATCC 1 cut(s) 195
BsuRI GGCC 4 cut(s) 294, 851, 922, 929
BtgI CCRYGG 3 cut(s) 295, 1565, 1608
BtrI CACGTC 1 cut(s) 1873
BtsCI GGATG 4 cut(s) 229, 1618, 1717, 2067
BtsIMutI CAGTG 3 cut(s) 8, 694, 1488
BveI ACCTGC 1 cut(s) 1408
Cac8I GCNNGC 3 cut(s) 560, 814, 1121
Cfr10I RCCGGY 1 cut(s) 382
Cfr13I GGNCC 7 cut(s) 728, 849, 920, 927, 954, 1027, 1068
Cfr42I CCGCGG 1 cut(s) 298
CpoI CGGWCCG 2 cut(s) 1027, 1068
CseI GACGC 1 cut(s) 1352
CspAI ACCGGT 1 cut(s) 382
CspI CGGWCCG 2 cut(s) 1027, 1068
CviAII CATG 7 cut(s) 115, 155, 275, 1386, 1489, 1609, 1851
DdeI CTNAG 6 cut(s) 159, 217, 323, 530, 768, 1278
DpnI GATC 7 cut(s) 5, 15, 329, 658, 708, 1944, 1964
DpnII GATC 7 cut(s) 3, 13, 327, 656, 706, 1942, 1962
DriI GACNNNNNGTC 2 cut(s) 726, 1461
Eam1104I CTCTTC 3 cut(s) 185, 356, 1239
Eam1105I GACNNNNNGTC 2 cut(s) 726, 1461
EarI CTCTTC 3 cut(s) 185, 356, 1239
EciI GGCGGA 1 cut(s) 710
Ecl136II GAGCTC 3 cut(s) 1166, 1249, 1358
Eco130I CCWWGG 2 cut(s) 108, 1608
Eco24I GRGCYC 4 cut(s) 897, 1168, 1251, 1360
Eco32I GATATC 1 cut(s) 636
Eco47I GGWCC 4 cut(s) 728, 954, 1027, 1068
Eco53kI GAGCTC 3 cut(s) 1166, 1249, 1358
Eco57I CTGAAG 6 cut(s) 361, 548, 1398, 1565, 1608, 1776
Eco88I CYCGRG 2 cut(s) 924, 1353
EcoICRI GAGCTC 3 cut(s) 1166, 1249, 1358
EcoRI GAATTC 2 cut(s) 580, 1073
EcoRII CCWGG 1 cut(s) 1251
EcoRV GATATC 1 cut(s) 636
EcoT14I CCWWGG 2 cut(s) 108, 1608
EcoT22I ATGCAT 2 cut(s) 254, 1884
EcoT38I GRGCYC 4 cut(s) 897, 1168, 1251, 1360
ErhI CCWWGG 2 cut(s) 108, 1608
Esp3I CGTCTC 1 cut(s) 223
FaeI CATG 7 cut(s) 118, 158, 278, 1389, 1492, 1612, 1854
FalI AAGNNNNNCTT 4 cut(s) 1961, 1993, 1989, 2021
FaqI GGGAC 2 cut(s) 127, 1060
FatI CATG 7 cut(s) 114, 154, 274, 1385, 1488, 1608, 1850
FblI GTMKAC 2 cut(s) 193, 1572
Fnu4HI GCNGC 8 cut(s) 295, 495, 693, 930, 1299, 1505, 1508, 2097
FokI GGATG 4 cut(s) 236, 1625, 1724, 2054
FriOI GRGCYC 4 cut(s) 897, 1168, 1251, 1360
Fsp4HI GCNGC 8 cut(s) 295, 495, 693, 930, 1299, 1505, 1508, 2097
FspBI CTAG 4 cut(s) 149, 416, 939, 1862
GluI GCNGC 8 cut(s) 295, 495, 693, 930, 1299, 1505, 1508, 2097
GsaI CCCAGC 1 cut(s) 704
HaeIII GGCC 4 cut(s) 294, 851, 922, 929
HapII CCGG 6 cut(s) 128, 383, 590, 673, 1025, 1066
HgaI GACGC 1 cut(s) 1352
Hin1II CATG 7 cut(s) 118, 158, 278, 1389, 1492, 1612, 1854
HincII GTYRAC 3 cut(s) 1275, 1342, 1702
HindII GTYRAC 3 cut(s) 1275, 1342, 1702
HindIII AAGCTT 3 cut(s) 556, 801, 1217
HinfI GANTC 8 cut(s) 187, 392, 599, 820, 1382, 1451, 1858, 2079
HpaI GTTAAC 1 cut(s) 1702
HpaII CCGG 6 cut(s) 128, 383, 590, 673, 1025, 1066
HphI GGTGA 5 cut(s) 143, 741, 856, 1055, 1537
Hpy166II GTNNAC 6 cut(s) 81, 194, 1275, 1342, 1573, 1702
Hpy8I GTNNAC 6 cut(s) 81, 194, 1275, 1342, 1573, 1702
Hpy99I CGWCG 1 cut(s) 1046
HpyCH4III ACNGT 4 cut(s) 1051, 1272, 1339, 1483
HpyCH4IV ACGT 3 cut(s) 549, 993, 1872
HpyF10VI GCNNNNNNNGC 4 cut(s) 111, 476, 809, 1400
HpyF3I CTNAG 6 cut(s) 159, 217, 323, 530, 768, 1278
HpySE526I ACGT 3 cut(s) 549, 993, 1872
Hsp92II CATG 7 cut(s) 118, 158, 278, 1389, 1492, 1612, 1854
KspAI GTTAAC 1 cut(s) 1702
KspI CCGCGG 1 cut(s) 298
Kzo9I GATC 7 cut(s) 3, 13, 327, 656, 706, 1942, 1962
LguI GCTCTTC 1 cut(s) 1239
LmnI GCTCC 8 cut(s) 94, 110, 287, 697, 892, 1254, 1306, 1391
Lsp1109I GCAGC 5 cut(s) 506, 1310, 1516, 1519, 2108
LweI GCATC 3 cut(s) 1272, 1702, 2076
MaeI CTAG 4 cut(s) 149, 416, 939, 1862
MaeII ACGT 3 cut(s) 549, 993, 1872
MaeIII GTNAC 3 cut(s) 340, 545, 989
MalI GATC 7 cut(s) 5, 15, 329, 658, 708, 1944, 1964
MboI GATC 7 cut(s) 3, 13, 327, 656, 706, 1942, 1962
MfeI CAATTG 2 cut(s) 396, 1136
MflI RGATCY 2 cut(s) 706, 1942
MhlI GDGCHC 4 cut(s) 897, 1168, 1251, 1360
MlyI GAGTC 1 cut(s) 1852
MmeI TCCRAC 1 cut(s) 634
Mph1103I ATGCAT 2 cut(s) 254, 1884
MroXI GAANNNNTTC 1 cut(s) 1473
MseI TTAA 8 cut(s) 372, 680, 764, 1145, 1701, 1764, 1952, 2042
MslI CAYNNNNRTG 1 cut(s) 2072
MspA1I CMGCKG 3 cut(s) 297, 497, 2099
MspCI CTTAAG 1 cut(s) 1763
MspI CCGG 6 cut(s) 128, 383, 590, 673, 1025, 1066
MspR9I CCNGG 2 cut(s) 129, 1253
MunI CAATTG 2 cut(s) 396, 1136
Mva1269I GAATGC 4 cut(s) 481, 613, 932, 1267
MvaI CCWGG 1 cut(s) 1253
MvnI CGCG 1 cut(s) 297
MwoI GCNNNNNNNGC 4 cut(s) 111, 476, 809, 1400
NciI CCSGG 1 cut(s) 129
NcoI CCATGG 1 cut(s) 1608
NdeII GATC 7 cut(s) 3, 13, 327, 656, 706, 1942, 1962
NlaIII CATG 7 cut(s) 118, 158, 278, 1389, 1492, 1612, 1854
NlaIV GGNNCC 4 cut(s) 90, 588, 894, 1107
NsiI ATGCAT 2 cut(s) 254, 1884
NspV TTCGAA 1 cut(s) 823
PaeR7I CTCGAG 1 cut(s) 1353
PaqCI CACCTGC 1 cut(s) 1408
PciSI GCTCTTC 1 cut(s) 1239
PctI GAATGC 4 cut(s) 481, 613, 932, 1267
PdmI GAANNNNTTC 1 cut(s) 1473
PfeI GAWTC 7 cut(s) 187, 392, 599, 820, 1382, 1451, 2079
PflFI GACNNNGTC 1 cut(s) 1829
PfoI TCCNGGA 1 cut(s) 1251
PinAI ACCGGT 1 cut(s) 382
PkrI GCNGC 8 cut(s) 296, 496, 694, 931, 1300, 1506, 1509, 2098
PleI GAGTC 1 cut(s) 1852
PpsI GAGTC 1 cut(s) 1852
Ppu21I YACGTR 1 cut(s) 994
PshAI GACNNNNGTC 1 cut(s) 1484
PshBI ATTAAT 2 cut(s) 680, 1145
Psp124BI GAGCTC 3 cut(s) 1168, 1251, 1360
Psp6I CCWGG 1 cut(s) 1251
PspFI CCCAGC 1 cut(s) 700
PspGI CCWGG 1 cut(s) 1251
PspN4I GGNNCC 4 cut(s) 90, 588, 894, 1107
PspPI GGNCC 7 cut(s) 728, 849, 920, 927, 954, 1027, 1068
PsuI RGATCY 2 cut(s) 706, 1942
PsyI GACNNNGTC 1 cut(s) 1829
PvuII CAGCTG 2 cut(s) 497, 2099
RseI CAYNNNNRTG 1 cut(s) 2072
Rsr2I CGGWCCG 2 cut(s) 1027, 1068
RsrII CGGWCCG 2 cut(s) 1027, 1068
SacI GAGCTC 3 cut(s) 1168, 1251, 1360
SacII CCGCGG 1 cut(s) 298
SapI GCTCTTC 1 cut(s) 1239
SaqAI TTAA 8 cut(s) 372, 680, 764, 1145, 1701, 1764, 1952, 2042
SatI GCNGC 8 cut(s) 295, 495, 693, 930, 1299, 1505, 1508, 2097
Sau3AI GATC 7 cut(s) 3, 13, 327, 656, 706, 1942, 1962
Sau96I GGNCC 7 cut(s) 728, 849, 920, 927, 954, 1027, 1068
SchI GAGTC 1 cut(s) 1852
ScrFI CCNGG 2 cut(s) 129, 1253
SduI GDGCHC 4 cut(s) 897, 1168, 1251, 1360
SfaNI GCATC 3 cut(s) 1272, 1702, 2076
Sfr274I CTCGAG 1 cut(s) 1353
Sfr303I CCGCGG 1 cut(s) 298
SfuI TTCGAA 1 cut(s) 823
SgrBI CCGCGG 1 cut(s) 298
SinI GGWCC 4 cut(s) 728, 954, 1027, 1068
SlaI CTCGAG 1 cut(s) 1353
SmiMI CAYNNNNRTG 1 cut(s) 2072
SmlI CTYRAG 6 cut(s) 286, 839, 1316, 1353, 1763, 2021
SmoI CTYRAG 6 cut(s) 286, 839, 1316, 1353, 1763, 2021
SsiI CCGC 6 cut(s) 48, 295, 297, 692, 695, 930
SspI AATATT 1 cut(s) 54
SspMI CTAG 4 cut(s) 149, 416, 939, 1862
SstI GAGCTC 3 cut(s) 1168, 1251, 1360
StyD4I CCNGG 2 cut(s) 127, 1251
StyI CCWWGG 2 cut(s) 108, 1608
TaaI ACNGT 4 cut(s) 1051, 1272, 1339, 1483
TaiI ACGT 3 cut(s) 552, 996, 1875
TaqI TCGA 4 cut(s) 823, 1354, 1454, 1679
TaqII GACCGA 3 cut(s) 737, 1044, 1085
TauI GCSGC 3 cut(s) 297, 695, 932
TfiI GAWTC 7 cut(s) 187, 392, 599, 820, 1382, 1451, 2079
Tru1I TTAA 8 cut(s) 372, 680, 764, 1145, 1701, 1764, 1952, 2042
Tru9I TTAA 8 cut(s) 372, 680, 764, 1145, 1701, 1764, 1952, 2042
TscAI CASTG 3 cut(s) 15, 694, 1488
TseI GCWGC 5 cut(s) 494, 1298, 1504, 1507, 2096
TspDTI ATGAA 9 cut(s) 46, 438, 503, 744, 1257, 1323, 1341, 1374, 1551
TspRI CASTG 3 cut(s) 15, 694, 1488
Tth111I GACNNNGTC 1 cut(s) 1829
Vha464I CTTAAG 1 cut(s) 1763
VpaK11BI GGWCC 4 cut(s) 728, 954, 1027, 1068
VspI ATTAAT 2 cut(s) 680, 1145
XapI RAATTY 5 cut(s) 580, 733, 778, 1073, 1156
XbaI TCTAGA 2 cut(s) 938, 1861
XhoI CTCGAG 1 cut(s) 1353
XmiI GTMKAC 2 cut(s) 193, 1572
XmnI GAANNNNTTC 1 cut(s) 1473
XspI CTAG 4 cut(s) 149, 416, 939, 1862
Zsp2I ATGCAT 2 cut(s) 254, 1884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.