Protein ALWAYS EARLY
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Myb_DNA-binding | PF00249 | 105 - 140 | 6.8e-06 | Myb-like DNA-binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 3 cut(s) | 99, 174, 176 |
| AciI | CCGC | 2 cut(s) | 99, 207 |
| AcsI | RAATTY | 2 cut(s) | 26, 49 |
| AcuI | CTGAAG | 5 cut(s) | 345, 372, 729, 789, 840 |
| AcvI | CACGTG | 1 cut(s) | 19 |
| AcyI | GRCGYC | 1 cut(s) | 612 |
| AfaI | GTAC | 3 cut(s) | 23, 396, 997 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 409 |
| AflIII | ACRYGT | 3 cut(s) | 16, 18, 300 |
| AgsI | TTSAA | 7 cut(s) | 9, 663, 694, 820, 872, 886, 923 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 103, 135 |
| AluBI | AGCT | 3 cut(s) | 331, 586, 898 |
| AluI | AGCT | 3 cut(s) | 331, 586, 898 |
| Alw26I | GTCTC | 1 cut(s) | 202 |
| Ama87I | CYCGRG | 1 cut(s) | 461 |
| AoxI | GGCC | 6 cut(s) | 41, 67, 250, 423, 444, 484 |
| ApeKI | GCWGC | 3 cut(s) | 163, 470, 678 |
| ApoI | RAATTY | 2 cut(s) | 26, 49 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 707, 739 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 77, 243 |
| AspLEI | GCGC | 5 cut(s) | 176, 178, 470, 705, 733 |
| AspS9I | GGNCC | 6 cut(s) | 42, 251, 308, 318, 424, 444 |
| AsuHPI | GGTGA | 1 cut(s) | 392 |
| AvaI | CYCGRG | 1 cut(s) | 461 |
| AvaII | GGWCC | 2 cut(s) | 308, 318 |
| BbrPI | CACGTG | 1 cut(s) | 19 |
| BbsI | GAAGAC | 2 cut(s) | 720, 879 |
| BbvI | GCAGC | 3 cut(s) | 150, 457, 665 |
| BccI | CCATC | 1 cut(s) | 668 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 452, 486 |
| BcoDI | GTCTC | 1 cut(s) | 202 |
| BfaI | CTAG | 1 cut(s) | 641 |
| BfoI | RGCGCY | 1 cut(s) | 471 |
| BglII | AGATCT | 1 cut(s) | 748 |
| BisI | GCNGC | 3 cut(s) | 164, 471, 679 |
| BlsI | GCNGC | 3 cut(s) | 165, 472, 680 |
| Bme18I | GGWCC | 2 cut(s) | 308, 318 |
| BmeT110I | CYCGRG | 1 cut(s) | 461 |
| BmgT120I | GGNCC | 6 cut(s) | 42, 251, 308, 318, 424, 444 |
| BmiI | GGNNCC | 2 cut(s) | 253, 565 |
| BmsI | GCATC | 3 cut(s) | 677, 718, 753 |
| BpiI | GAAGAC | 2 cut(s) | 720, 879 |
| BpuEI | CTTGAG | 1 cut(s) | 778 |
| BsaAI | YACGTR | 1 cut(s) | 19 |
| BsaHI | GRCGYC | 1 cut(s) | 612 |
| BsaJI | CCNNGG | 2 cut(s) | 38, 462 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 409 |
| Bse1I | ACTGG | 3 cut(s) | 377, 940, 965 |
| Bse3DI | GCAATG | 2 cut(s) | 501, 822 |
| BseDI | CCNNGG | 2 cut(s) | 38, 462 |
| BseGI | GGATG | 2 cut(s) | 381, 768 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 409 |
| BseMI | GCAATG | 2 cut(s) | 501, 822 |
| BseMII | CTCAG | 3 cut(s) | 630, 665, 908 |
| BseNI | ACTGG | 3 cut(s) | 377, 940, 965 |
| BsePI | GCGCGC | 1 cut(s) | 174 |
| BseRI | GAGGAG | 1 cut(s) | 114 |
| BseXI | GCAGC | 3 cut(s) | 150, 457, 665 |
| BseYI | CCCAGC | 1 cut(s) | 898 |
| BsgI | GTGCAG | 1 cut(s) | 780 |
| Bsh1236I | CGCG | 3 cut(s) | 99, 174, 176 |
| Bsh1285I | CGRYCG | 1 cut(s) | 172 |
| BshFI | GGCC | 6 cut(s) | 43, 69, 252, 425, 446, 486 |
| BsiEI | CGRYCG | 1 cut(s) | 172 |
| BsiHKCI | CYCGRG | 1 cut(s) | 461 |
| BsiSI | CCGG | 1 cut(s) | 70 |
| BslFI | GGGAC | 1 cut(s) | 640 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 409 |
| BsmAI | GTCTC | 1 cut(s) | 202 |
| BsmFI | GGGAC | 1 cut(s) | 640 |
| BsnI | GGCC | 6 cut(s) | 43, 69, 252, 425, 446, 486 |
| BsoBI | CYCGRG | 1 cut(s) | 461 |
| Bsp1407I | TGTACA | 1 cut(s) | 21 |
| Bsp143I | GATC | 4 cut(s) | 142, 169, 404, 748 |
| BspACI | CCGC | 2 cut(s) | 99, 207 |
| BspANI | GGCC | 6 cut(s) | 43, 69, 252, 425, 446, 486 |
| BspCNI | CTCAG | 3 cut(s) | 629, 664, 907 |
| BspFNI | CGCG | 3 cut(s) | 99, 174, 176 |
| BspLI | GGNNCC | 2 cut(s) | 253, 565 |
| BspQI | GCTCTTC | 1 cut(s) | 321 |
| BsrDI | GCAATG | 2 cut(s) | 501, 822 |
| BsrGI | TGTACA | 1 cut(s) | 21 |
| BsrI | ACTGG | 3 cut(s) | 377, 940, 965 |
| BssECI | CCNNGG | 2 cut(s) | 38, 462 |
| BssHII | GCGCGC | 1 cut(s) | 174 |
| BssMI | GATC | 4 cut(s) | 142, 169, 404, 748 |
| BssNI | GRCGYC | 1 cut(s) | 612 |
| BssT1I | CCWWGG | 1 cut(s) | 38 |
| Bst4CI | ACNGT | 3 cut(s) | 536, 690, 927 |
| Bst6I | CTCTTC | 3 cut(s) | 321, 462, 724 |
| BstACI | GRCGYC | 1 cut(s) | 612 |
| BstAUI | TGTACA | 1 cut(s) | 21 |
| BstBAI | YACGTR | 1 cut(s) | 19 |
| BstC8I | GCNNGC | 2 cut(s) | 176, 588 |
| BstDEI | CTNAG | 4 cut(s) | 616, 651, 828, 894 |
| BstF5I | GGATG | 2 cut(s) | 381, 768 |
| BstFNI | CGCG | 3 cut(s) | 99, 174, 176 |
| BstH2I | RGCGCY | 1 cut(s) | 471 |
| BstHHI | GCGC | 5 cut(s) | 176, 178, 470, 705, 733 |
| BstKTI | GATC | 4 cut(s) | 145, 172, 407, 751 |
| BstMAI | GTCTC | 1 cut(s) | 202 |
| BstMBI | GATC | 4 cut(s) | 142, 169, 404, 748 |
| BstMCI | CGRYCG | 1 cut(s) | 172 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 583 |
| BstNSI | RCATGY | 1 cut(s) | 304 |
| BstUI | CGCG | 3 cut(s) | 99, 174, 176 |
| BstV1I | GCAGC | 3 cut(s) | 150, 457, 665 |
| BstV2I | GAAGAC | 2 cut(s) | 720, 879 |
| BstX2I | RGATCY | 1 cut(s) | 748 |
| BstYI | RGATCY | 1 cut(s) | 748 |
| BsuRI | GGCC | 6 cut(s) | 43, 69, 252, 425, 446, 486 |
| BtsCI | GGATG | 2 cut(s) | 381, 768 |
| BtsI | GCAGTG | 2 cut(s) | 158, 876 |
| BtsIMutI | CAGTG | 8 cut(s) | 88, 158, 321, 541, 686, 705, 876, 933 |
| Cac8I | GCNNGC | 2 cut(s) | 176, 588 |
| CfoI | GCGC | 5 cut(s) | 176, 178, 470, 705, 733 |
| Cfr13I | GGNCC | 6 cut(s) | 42, 251, 308, 318, 424, 444 |
| CseI | GACGC | 1 cut(s) | 620 |
| Csp6I | GTAC | 3 cut(s) | 22, 395, 996 |
| CviAII | CATG | 2 cut(s) | 248, 301 |
| CviQI | GTAC | 3 cut(s) | 22, 395, 996 |
| DdeI | CTNAG | 4 cut(s) | 616, 651, 828, 894 |
| DpnI | GATC | 4 cut(s) | 144, 171, 406, 750 |
| DpnII | GATC | 4 cut(s) | 142, 169, 404, 748 |
| DraI | TTTAAA | 2 cut(s) | 31, 90 |
| Eam1104I | CTCTTC | 3 cut(s) | 321, 462, 724 |
| EarI | CTCTTC | 3 cut(s) | 321, 462, 724 |
| Eco130I | CCWWGG | 1 cut(s) | 38 |
| Eco32I | GATATC | 1 cut(s) | 353 |
| Eco47I | GGWCC | 2 cut(s) | 308, 318 |
| Eco57I | CTGAAG | 5 cut(s) | 345, 372, 729, 789, 840 |
| Eco72I | CACGTG | 1 cut(s) | 19 |
| Eco88I | CYCGRG | 1 cut(s) | 461 |
| EcoO109I | RGGNCCY | 3 cut(s) | 308, 424, 444 |
| EcoRV | GATATC | 1 cut(s) | 353 |
| EcoT14I | CCWWGG | 1 cut(s) | 38 |
| ErhI | CCWWGG | 1 cut(s) | 38 |
| FaeI | CATG | 2 cut(s) | 251, 304 |
| FaqI | GGGAC | 1 cut(s) | 640 |
| FatI | CATG | 2 cut(s) | 247, 300 |
| Fnu4HI | GCNGC | 3 cut(s) | 164, 471, 679 |
| FokI | GGATG | 2 cut(s) | 388, 775 |
| Fsp4HI | GCNGC | 3 cut(s) | 164, 471, 679 |
| FspBI | CTAG | 1 cut(s) | 641 |
| GlaI | GCGC | 5 cut(s) | 175, 177, 469, 704, 732 |
| GluI | GCNGC | 3 cut(s) | 164, 471, 679 |
| GsaI | CCCAGC | 1 cut(s) | 902 |
| HaeII | RGCGCY | 1 cut(s) | 471 |
| HaeIII | GGCC | 6 cut(s) | 43, 69, 252, 425, 446, 486 |
| HapII | CCGG | 1 cut(s) | 70 |
| HgaI | GACGC | 1 cut(s) | 620 |
| HhaI | GCGC | 5 cut(s) | 176, 178, 470, 705, 733 |
| Hin1I | GRCGYC | 1 cut(s) | 612 |
| Hin1II | CATG | 2 cut(s) | 251, 304 |
| Hin6I | GCGC | 5 cut(s) | 174, 176, 468, 703, 731 |
| HinP1I | GCGC | 5 cut(s) | 174, 176, 468, 703, 731 |
| HindIII | AAGCTT | 1 cut(s) | 584 |
| HinfI | GANTC | 4 cut(s) | 5, 716, 788, 850 |
| HpaII | CCGG | 1 cut(s) | 70 |
| HphI | GGTGA | 1 cut(s) | 392 |
| Hpy166II | GTNNAC | 2 cut(s) | 22, 539 |
| Hpy188I | TCNGA | 5 cut(s) | 202, 298, 619, 673, 931 |
| Hpy188III | TCNNGA | 3 cut(s) | 140, 461, 641 |
| Hpy8I | GTNNAC | 2 cut(s) | 22, 539 |
| HpyAV | CCTTC | 6 cut(s) | 138, 341, 373, 614, 623, 864 |
| HpyCH4III | ACNGT | 3 cut(s) | 536, 690, 927 |
| HpyCH4IV | ACGT | 2 cut(s) | 18, 397 |
| HpyCH4V | TGCA | 5 cut(s) | 549, 560, 590, 668, 797 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 583 |
| HpyF3I | CTNAG | 4 cut(s) | 616, 651, 828, 894 |
| HpySE526I | ACGT | 2 cut(s) | 18, 397 |
| Hsp92I | GRCGYC | 1 cut(s) | 612 |
| Hsp92II | CATG | 2 cut(s) | 251, 304 |
| HspAI | GCGC | 5 cut(s) | 174, 176, 468, 703, 731 |
| Kzo9I | GATC | 4 cut(s) | 142, 169, 404, 748 |
| LguI | GCTCTTC | 1 cut(s) | 321 |
| Lsp1109I | GCAGC | 3 cut(s) | 150, 457, 665 |
| LweI | GCATC | 3 cut(s) | 677, 718, 753 |
| MaeI | CTAG | 1 cut(s) | 641 |
| MaeII | ACGT | 2 cut(s) | 18, 397 |
| MaeIII | GTNAC | 7 cut(s) | 12, 398, 503, 530, 684, 859, 976 |
| MalI | GATC | 4 cut(s) | 144, 171, 406, 750 |
| MboI | GATC | 4 cut(s) | 142, 169, 404, 748 |
| MboII | GAAGA | 7 cut(s) | 338, 449, 711, 722, 725, 821, 884 |
| MfeI | CAATTG | 1 cut(s) | 663 |
| MflI | RGATCY | 1 cut(s) | 748 |
| MluCI | AATT | 7 cut(s) | 26, 49, 111, 231, 599, 663, 1000 |
| MlyI | GAGTC | 1 cut(s) | 710 |
| MroXI | GAANNNNTTC | 2 cut(s) | 77, 243 |
| MseI | TTAA | 4 cut(s) | 30, 89, 234, 969 |
| MslI | CAYNNNNRTG | 1 cut(s) | 342 |
| MspA1I | CMGCKG | 1 cut(s) | 898 |
| MspI | CCGG | 1 cut(s) | 70 |
| MunI | CAATTG | 1 cut(s) | 663 |
| MvnI | CGCG | 3 cut(s) | 99, 174, 176 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 583 |
| NdeII | GATC | 4 cut(s) | 142, 169, 404, 748 |
| NlaIII | CATG | 2 cut(s) | 251, 304 |
| NlaIV | GGNNCC | 2 cut(s) | 253, 565 |
| NmuCI | GTSAC | 6 cut(s) | 12, 398, 503, 530, 684, 976 |
| NspI | RCATGY | 1 cut(s) | 304 |
| PauI | GCGCGC | 1 cut(s) | 174 |
| PciI | ACATGT | 1 cut(s) | 300 |
| PciSI | GCTCTTC | 1 cut(s) | 321 |
| PdmI | GAANNNNTTC | 2 cut(s) | 77, 243 |
| PfeI | GAWTC | 3 cut(s) | 5, 788, 850 |
| PkrI | GCNGC | 3 cut(s) | 165, 472, 680 |
| Ple19I | CGATCG | 1 cut(s) | 172 |
| PleI | GAGTC | 1 cut(s) | 710 |
| PmaCI | CACGTG | 1 cut(s) | 19 |
| PmlI | CACGTG | 1 cut(s) | 19 |
| PpsI | GAGTC | 1 cut(s) | 710 |
| Ppu21I | YACGTR | 1 cut(s) | 19 |
| PpuMI | RGGWCCY | 1 cut(s) | 308 |
| PscI | ACATGT | 1 cut(s) | 300 |
| Psp5II | RGGWCCY | 1 cut(s) | 308 |
| PspCI | CACGTG | 1 cut(s) | 19 |
| PspFI | CCCAGC | 1 cut(s) | 898 |
| PspN4I | GGNNCC | 2 cut(s) | 253, 565 |
| PspPI | GGNCC | 6 cut(s) | 42, 251, 308, 318, 424, 444 |
| PspPPI | RGGWCCY | 1 cut(s) | 308 |
| PsuI | RGATCY | 1 cut(s) | 748 |
| PteI | GCGCGC | 1 cut(s) | 174 |
| PvuI | CGATCG | 1 cut(s) | 172 |
| PvuII | CAGCTG | 1 cut(s) | 898 |
| RsaI | GTAC | 3 cut(s) | 23, 396, 997 |
| RsaNI | GTAC | 3 cut(s) | 22, 395, 996 |
| RseI | CAYNNNNRTG | 1 cut(s) | 342 |
| SapI | GCTCTTC | 1 cut(s) | 321 |
| SaqAI | TTAA | 4 cut(s) | 30, 89, 234, 969 |
| SatI | GCNGC | 3 cut(s) | 164, 471, 679 |
| Sau3AI | GATC | 4 cut(s) | 142, 169, 404, 748 |
| Sau96I | GGNCC | 6 cut(s) | 42, 251, 308, 318, 424, 444 |
| SchI | GAGTC | 1 cut(s) | 710 |
| SetI | ASST | 7 cut(s) | 21, 313, 333, 384, 400, 588, 900 |
| SfaNI | GCATC | 3 cut(s) | 677, 718, 753 |
| SinI | GGWCC | 2 cut(s) | 308, 318 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 342 |
| SmlI | CTYRAG | 1 cut(s) | 757 |
| SmoI | CTYRAG | 1 cut(s) | 757 |
| Sse9I | AATT | 7 cut(s) | 26, 49, 111, 231, 599, 663, 1000 |
| SsiI | CCGC | 2 cut(s) | 99, 207 |
| SspMI | CTAG | 1 cut(s) | 641 |
| StyI | CCWWGG | 1 cut(s) | 38 |
| TaaI | ACNGT | 3 cut(s) | 536, 690, 927 |
| TaiI | ACGT | 2 cut(s) | 21, 400 |
| TaqI | TCGA | 1 cut(s) | 804 |
| TasI | AATT | 7 cut(s) | 26, 49, 111, 231, 599, 663, 1000 |
| TatI | WGTACW | 1 cut(s) | 21 |
| TfiI | GAWTC | 3 cut(s) | 5, 788, 850 |
| Tru1I | TTAA | 4 cut(s) | 30, 89, 234, 969 |
| Tru9I | TTAA | 4 cut(s) | 30, 89, 234, 969 |
| TscAI | CASTG | 8 cut(s) | 88, 165, 328, 541, 693, 712, 883, 940 |
| TseFI | GTSAC | 6 cut(s) | 12, 398, 503, 530, 684, 976 |
| TseI | GCWGC | 3 cut(s) | 163, 470, 678 |
| Tsp45I | GTSAC | 6 cut(s) | 12, 398, 503, 530, 684, 976 |
| TspDTI | ATGAA | 4 cut(s) | 236, 360, 392, 452 |
| TspGWI | ACGGA | 2 cut(s) | 619, 983 |
| TspRI | CASTG | 8 cut(s) | 88, 165, 328, 541, 693, 712, 883, 940 |
| VpaK11BI | GGWCC | 2 cut(s) | 308, 318 |
| XapI | RAATTY | 2 cut(s) | 26, 49 |
| XbaI | TCTAGA | 1 cut(s) | 640 |
| XceI | RCATGY | 1 cut(s) | 304 |
| XmnI | GAANNNNTTC | 2 cut(s) | 77, 243 |
| XspI | CTAG | 1 cut(s) | 641 |