RchiOBHm_Chr1g0318221

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000060
Physical Location & Seq
Reverse (-)
5661593 .. 5663475
1883 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54851

Sequence Viewer

Length: 1476 bp
ATGGAAGTGATAAAGTCTAGGAAGTCATCACGAAGAAAAGAAGAAACTTCTAGTAATGACGAAGAAGTAGAAGAAGAAGGAGAAGAAACAGAGGAGGAAGAAGAAGGAGAAGAAGAAGAAAAGAAGGAGGAAGAGGAGGAGGAGGATGATGACCGAGAAACAACACAAAGGTTTTATGTGCAGACAAGGAGTCTAAGGAGCAAAAAGAAACAAGAGTATGATGAAGACGAGGCCGAACAGCCAACGAAAAAGAAGATCAAAAGGGAAAAGTCAAACACGAAAGAGGAAAAGACAAAGAAAGGGGAAAGGAGGAACACAAAGACAACAGAAAAGGCAAAGATCCAGTGGAAGCAACAGAAATGCACTCTAAGTGCTTTCTGGAGATTGATTGACACATATAGAGAGAAAATACCTAAAGGGGCTTGGGATATTTTGAGTACTACTGTATTTTGGGGGATGATCAGACCATTCTATGAGAAGAAGCTTACAGAAACTCAGCTCCACAAACATGAGGCCGACTTGGAGATTATACTGAAGTACTTTGATGTTAAAAAAGCCAAGTTTGTGTTTGGGGAGACAGAAATGGAAATAACATTGCAGGACATAAATGAATTGTTTGACCTGCCAACAACTGGTATTGAATGGGACCTGAGCAAGAAGGTGCTCAAGGAGGAACGGAAGGCATCTTCGATATTTGACGTCAACATGAGGAAAGAAACAGTAATAAAACCTGATCTGGAAAACAAACTCAGCAAGGAGCTCGGCAAGAAGAAGAACGCTGATCCTAAGATAATTGCGGCACTGCTTATCATGTACCTCTTCAATGCATTCTTCTTCAGCAGGACATCAACAACCTTGACATGGGACCTCATCAACGCTTGTGAAGACATAGATAACATAAACAGTTTCAATTGGGCCAAGATGGTACTAGATTTTCTGCTGGATGGCCTTCAGAGGTACCGAACAGATCATCCAACGACTCTTTCTGGCTGCATCATTCTCATATATTACTGGTTCTTGGAGAAGACCAAGATCAGAAACTGGATTCCAGGAATGGAGGATGAGAAACCGAGATTTGTGAGGTGGTCGATAAAGGAGCTGTTCAACCTGCAGAAGCTCCATCAGAATCCAGACTGGCCAGAGGAGTTGATAAAAGATGGGCCTTGGTTAGAACATTGCTACATCAACTTGTCGGATACGGAGGAGGAGCAAGAAACACCAAGTTTCAACAACTGGGTTCCCCAAGCGAGCCAAGACGAGGAAGAGGAGACCATAAGGCTTACTGGTAACATGAAAGTTCTGCTAAAAGAAATGGATAGAGTGATTGAAGACAATGGTGAAAAACAGGAAATGGAGAAGCAAATGAAGAAACTATTGGAAGCAAATGAGGGGCTTGCAAACCATATTAGGGAGCTTTGGAAAAAGGTTACTGTTGCTGATGAGAAAATTGAGAGTATGGAGAAAAAAAATGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

491

Amino Acids

58.55

Weight (kDa)

5.07

Isoelectric Point (pI)

51.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 186 - 366 2e-09 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 702
Acc36I ACCTGC 2 cut(s) 630, 1116
Acc65I GGTACC 1 cut(s) 957
AccB1I GGYRCC 1 cut(s) 957
AccB7I CCANNNNNTGG 1 cut(s) 632
AciI CCGC 1 cut(s) 797
AclWI GGATC 2 cut(s) 334, 776
AcoI YGGCCR 1 cut(s) 1136
AcuI CTGAAG 3 cut(s) 554, 820, 935
AcyI GRCGYC 1 cut(s) 699
AfaI GTAC 5 cut(s) 439, 539, 815, 927, 959
AfiI CCNNNNNNNGG 4 cut(s) 632, 861, 1258, 1408
AgsI TTSAA 6 cut(s) 641, 823, 910, 1105, 1228, 1328
AhdI GACNNNNNGTC 1 cut(s) 189
AjnI CCWGG 1 cut(s) 1048
AjuI GAANNNNNNNTTGG 4 cut(s) 967, 999, 1358, 1390
AloI GAACNNNNNNTCC 2 cut(s) 955, 987
AluBI AGCT 6 cut(s) 484, 499, 760, 1099, 1117, 1414
AluI AGCT 6 cut(s) 484, 499, 760, 1099, 1117, 1414
Alw21I GWGCWC 2 cut(s) 666, 762
Alw26I GTCTC 2 cut(s) 569, 1262
AlwI GGATC 2 cut(s) 334, 776
AlwNI CAGNNNCTG 1 cut(s) 1041
AoxI GGCC 6 cut(s) 231, 513, 915, 946, 1136, 1160
ApeKI GCWGC 1 cut(s) 990
Asp718I GGTACC 1 cut(s) 957
AspS9I GGNCC 4 cut(s) 646, 865, 915, 1160
AsuHPI GGTGA 1 cut(s) 1349
AvaII GGWCC 2 cut(s) 646, 865
BalI TGGCCA 1 cut(s) 1138
BanI GGYRCC 1 cut(s) 957
BanII GRGCYC 1 cut(s) 762
BbsI GAAGAC 4 cut(s) 231, 891, 1031, 1335
Bbv12I GWGCWC 2 cut(s) 666, 762
BbvI GCAGC 1 cut(s) 977
BccI CCATC 4 cut(s) 916, 938, 1128, 1151
BcgI CGANNNNNNTGC 2 cut(s) 742, 776
BciT130I CCWGG 1 cut(s) 1050
BciVI GTATCC 1 cut(s) 1189
BclI TGATCA 1 cut(s) 459
BcoDI GTCTC 2 cut(s) 569, 1262
BfaI CTAG 3 cut(s) 18, 51, 929
BfmI CTRYAG 1 cut(s) 1109
BfuAI ACCTGC 2 cut(s) 630, 1116
BfuI GTATCC 1 cut(s) 1189
BisI GCNGC 2 cut(s) 798, 991
BlsI GCNGC 2 cut(s) 799, 992
BmcAI AGTACT 2 cut(s) 439, 539
Bme1390I CCNGG 1 cut(s) 1050
Bme18I GGWCC 2 cut(s) 646, 865
BmeRI GACNNNNNGTC 1 cut(s) 189
BmgT120I GGNCC 4 cut(s) 646, 865, 915, 1160
BmiI GGNNCC 4 cut(s) 647, 866, 959, 1239
BmrFI CCNGG 1 cut(s) 1050
BmrI ACTGGG 1 cut(s) 1243
BmsI GCATC 2 cut(s) 692, 1002
BmuI ACTGGG 1 cut(s) 1243
BpiI GAAGAC 4 cut(s) 231, 891, 1031, 1335
BpmI CTGGAG 1 cut(s) 400
Bpu10I CCTNAGC 1 cut(s) 650
BpuEI CTTGAG 1 cut(s) 650
BsaHI GRCGYC 1 cut(s) 699
BsaI GGTCTC 1 cut(s) 1262
BsaJI CCNNGG 1 cut(s) 1163
Bsc4I CCNNNNNNNGG 4 cut(s) 632, 861, 1258, 1408
Bse1I ACTGG 7 cut(s) 343, 637, 1016, 1046, 1139, 1238, 1288
Bse3DI GCAATG 2 cut(s) 593, 1174
BseBI CCWGG 1 cut(s) 1050
BseDI CCNNGG 1 cut(s) 1163
BseGI GGATG 5 cut(s) 151, 462, 949, 970, 1066
BseLI CCNNNNNNNGG 4 cut(s) 632, 861, 1258, 1408
BseMI GCAATG 2 cut(s) 593, 1174
BseMII CTCAG 3 cut(s) 509, 641, 763
BseNI ACTGG 7 cut(s) 343, 637, 1016, 1046, 1139, 1238, 1288
BseRI GAGGAG 8 cut(s) 107, 149, 152, 155, 1157, 1217, 1220, 1280
BseXI GCAGC 1 cut(s) 977
BsgI GTGCAG 1 cut(s) 200
BshFI GGCC 6 cut(s) 233, 515, 917, 948, 1138, 1162
BshNI GGYRCC 1 cut(s) 957
BsiHKAI GWGCWC 2 cut(s) 666, 762
BslFI GGGAC 2 cut(s) 659, 878
BslI CCNNNNNNNGG 4 cut(s) 632, 861, 1258, 1408
BsmAI GTCTC 2 cut(s) 569, 1262
BsmFI GGGAC 2 cut(s) 659, 878
BsmI GAATGC 1 cut(s) 827
BsnI GGCC 6 cut(s) 233, 515, 917, 948, 1138, 1162
Bso31I GGTCTC 1 cut(s) 1262
Bsp1286I GDGCHC 2 cut(s) 666, 762
Bsp143I GATC 7 cut(s) 255, 339, 459, 733, 781, 967, 1032
BspACI CCGC 1 cut(s) 797
BspANI GGCC 6 cut(s) 233, 515, 917, 948, 1138, 1162
BspCNI CTCAG 3 cut(s) 508, 642, 762
BspLI GGNNCC 4 cut(s) 647, 866, 959, 1239
BspMAI CTGCAG 1 cut(s) 1113
BspMI ACCTGC 2 cut(s) 630, 1116
BspPI GGATC 2 cut(s) 334, 776
BspT107I GGYRCC 1 cut(s) 957
BspTNI GGTCTC 1 cut(s) 1262
BsrDI GCAATG 2 cut(s) 593, 1174
BsrI ACTGG 7 cut(s) 343, 637, 1016, 1046, 1139, 1238, 1288
BssECI CCNNGG 1 cut(s) 1163
BssMI GATC 7 cut(s) 255, 339, 459, 733, 781, 967, 1032
BssNI GRCGYC 1 cut(s) 699
BssT1I CCWWGG 1 cut(s) 1163
Bst2UI CCWGG 1 cut(s) 1050
Bst4CI ACNGT 4 cut(s) 445, 721, 905, 1432
Bst6I CTCTTC 3 cut(s) 126, 824, 1257
BstACI GRCGYC 1 cut(s) 699
BstC8I GCNNGC 2 cut(s) 1249, 1395
BstDEI CTNAG 6 cut(s) 194, 368, 495, 650, 749, 786
BstF5I GGATG 5 cut(s) 151, 462, 949, 970, 1066
BstKTI GATC 7 cut(s) 258, 342, 462, 736, 784, 970, 1035
BstMAI GTCTC 2 cut(s) 569, 1262
BstMBI GATC 7 cut(s) 255, 339, 459, 733, 781, 967, 1032
BstNI CCWGG 1 cut(s) 1050
BstSCI CCNGG 1 cut(s) 1048
BstSFI CTRYAG 1 cut(s) 1109
BstV1I GCAGC 1 cut(s) 977
BstV2I GAAGAC 4 cut(s) 231, 891, 1031, 1335
BstX2I RGATCY 1 cut(s) 339
BstYI RGATCY 1 cut(s) 339
BsuI GTATCC 1 cut(s) 1189
BsuRI GGCC 6 cut(s) 233, 515, 917, 948, 1138, 1162
BtsCI GGATG 5 cut(s) 151, 462, 949, 970, 1066
BtsI GCAGTG 1 cut(s) 800
BtsIMutI CAGTG 2 cut(s) 350, 800
BveI ACCTGC 2 cut(s) 630, 1116
Cac8I GCNNGC 2 cut(s) 1249, 1395
CaiI CAGNNNCTG 1 cut(s) 1041
Cfr13I GGNCC 4 cut(s) 646, 865, 915, 1160
Csp6I GTAC 5 cut(s) 438, 538, 814, 926, 958
CviAII CATG 5 cut(s) 509, 706, 811, 861, 1291
CviQI GTAC 5 cut(s) 438, 538, 814, 926, 958
DdeI CTNAG 6 cut(s) 194, 368, 495, 650, 749, 786
DpnI GATC 7 cut(s) 257, 341, 461, 735, 783, 969, 1034
DpnII GATC 7 cut(s) 255, 339, 459, 733, 781, 967, 1032
DriI GACNNNNNGTC 1 cut(s) 189
EaeI YGGCCR 1 cut(s) 1136
Eam1104I CTCTTC 3 cut(s) 126, 824, 1257
Eam1105I GACNNNNNGTC 1 cut(s) 189
EarI CTCTTC 3 cut(s) 126, 824, 1257
Ecl136II GAGCTC 1 cut(s) 760
Eco130I CCWWGG 1 cut(s) 1163
Eco24I GRGCYC 1 cut(s) 762
Eco31I GGTCTC 1 cut(s) 1262
Eco47I GGWCC 2 cut(s) 646, 865
Eco53kI GAGCTC 1 cut(s) 760
Eco57I CTGAAG 3 cut(s) 554, 820, 935
EcoICRI GAGCTC 1 cut(s) 760
EcoO109I RGGNCCY 2 cut(s) 646, 865
EcoRII CCWGG 1 cut(s) 1048
EcoT14I CCWWGG 1 cut(s) 1163
EcoT22I ATGCAT 1 cut(s) 829
EcoT38I GRGCYC 1 cut(s) 762
ErhI CCWWGG 1 cut(s) 1163
FaeI CATG 5 cut(s) 512, 709, 814, 864, 1294
FaqI GGGAC 2 cut(s) 659, 878
FatI CATG 5 cut(s) 508, 705, 810, 860, 1290
FbaI TGATCA 1 cut(s) 459
Fnu4HI GCNGC 2 cut(s) 798, 991
FokI GGATG 5 cut(s) 158, 469, 956, 957, 1073
FriOI GRGCYC 1 cut(s) 762
Fsp4HI GCNGC 2 cut(s) 798, 991
FspBI CTAG 3 cut(s) 18, 51, 929
GluI GCNGC 2 cut(s) 798, 991
GsuI CTGGAG 1 cut(s) 400
HaeIII GGCC 6 cut(s) 233, 515, 917, 948, 1138, 1162
Hin1I GRCGYC 1 cut(s) 699
Hin1II CATG 5 cut(s) 512, 709, 814, 864, 1294
HincII GTYRAC 1 cut(s) 703
HindII GTYRAC 1 cut(s) 703
HindIII AAGCTT 1 cut(s) 482
HinfI GANTC 4 cut(s) 190, 979, 1045, 1126
HphI GGTGA 1 cut(s) 1349
Hpy166II GTNNAC 1 cut(s) 703
Hpy188I TCNGA 5 cut(s) 464, 954, 1037, 1125, 1195
Hpy188III TCNNGA 4 cut(s) 30, 379, 737, 1130
Hpy8I GTNNAC 1 cut(s) 703
HpyAV CCTTC 6 cut(s) 71, 98, 118, 652, 673, 959
HpyCH4III ACNGT 4 cut(s) 445, 721, 905, 1432
HpyCH4IV ACGT 1 cut(s) 699
HpyCH4V TGCA 7 cut(s) 181, 363, 598, 827, 993, 1111, 1397
HpyF3I CTNAG 6 cut(s) 194, 368, 495, 650, 749, 786
HpySE526I ACGT 1 cut(s) 699
Hsp92I GRCGYC 1 cut(s) 699
Hsp92II CATG 5 cut(s) 512, 709, 814, 864, 1294
KpnI GGTACC 1 cut(s) 961
Ksp22I TGATCA 1 cut(s) 459
Kzo9I GATC 7 cut(s) 255, 339, 459, 733, 781, 967, 1032
LmnI GCTCC 7 cut(s) 198, 504, 757, 1096, 1122, 1207, 1411
Lsp1109I GCAGC 1 cut(s) 977
LweI GCATC 2 cut(s) 692, 1002
MaeI CTAG 3 cut(s) 18, 51, 929
MaeII ACGT 1 cut(s) 699
MaeIII GTNAC 2 cut(s) 1286, 1426
MalI GATC 7 cut(s) 257, 341, 461, 735, 783, 969, 1034
MboI GATC 7 cut(s) 255, 339, 459, 733, 781, 967, 1032
MfeI CAATTG 1 cut(s) 910
MflI RGATCY 1 cut(s) 339
MhlI GDGCHC 2 cut(s) 666, 762
MlsI TGGCCA 1 cut(s) 1138
MluCI AATT 4 cut(s) 611, 792, 910, 1446
MluNI TGGCCA 1 cut(s) 1138
MlyI GAGTC 2 cut(s) 199, 973
MmeI TCCRAC 2 cut(s) 998, 1173
Mox20I TGGCCA 1 cut(s) 1138
Mph1103I ATGCAT 1 cut(s) 829
MscI TGGCCA 1 cut(s) 1138
MseI TTAA 1 cut(s) 549
MslI CAYNNNNRTG 1 cut(s) 507
Msp20I TGGCCA 1 cut(s) 1138
MspR9I CCNGG 1 cut(s) 1050
MunI CAATTG 1 cut(s) 910
Mva1269I GAATGC 1 cut(s) 827
MvaI CCWGG 1 cut(s) 1050
NdeII GATC 7 cut(s) 255, 339, 459, 733, 781, 967, 1032
NlaIII CATG 5 cut(s) 512, 709, 814, 864, 1294
NlaIV GGNNCC 4 cut(s) 647, 866, 959, 1239
NmeAIII GCCGAG 1 cut(s) 741
NsiI ATGCAT 1 cut(s) 829
PctI GAATGC 1 cut(s) 827
PfeI GAWTC 2 cut(s) 1045, 1126
PflMI CCANNNNNTGG 1 cut(s) 632
PfoI TCCNGGA 1 cut(s) 1048
PkrI GCNGC 2 cut(s) 799, 992
PleI GAGTC 2 cut(s) 198, 973
PpsI GAGTC 2 cut(s) 198, 973
PpuMI RGGWCCY 2 cut(s) 646, 865
Psp124BI GAGCTC 1 cut(s) 762
Psp5II RGGWCCY 2 cut(s) 646, 865
Psp6I CCWGG 1 cut(s) 1048
PspGI CCWGG 1 cut(s) 1048
PspN4I GGNNCC 4 cut(s) 647, 866, 959, 1239
PspPI GGNCC 4 cut(s) 646, 865, 915, 1160
PspPPI RGGWCCY 2 cut(s) 646, 865
PstI CTGCAG 1 cut(s) 1113
PstNI CAGNNNCTG 1 cut(s) 1041
PsuI RGATCY 1 cut(s) 339
RsaI GTAC 5 cut(s) 439, 539, 815, 927, 959
RsaNI GTAC 5 cut(s) 438, 538, 814, 926, 958
RseI CAYNNNNRTG 1 cut(s) 507
SacI GAGCTC 1 cut(s) 762
SaqAI TTAA 1 cut(s) 549
SatI GCNGC 2 cut(s) 798, 991
Sau3AI GATC 7 cut(s) 255, 339, 459, 733, 781, 967, 1032
Sau96I GGNCC 4 cut(s) 646, 865, 915, 1160
ScaI AGTACT 2 cut(s) 439, 539
SchI GAGTC 2 cut(s) 199, 973
ScrFI CCNGG 1 cut(s) 1050
SduI GDGCHC 2 cut(s) 666, 762
SfaNI GCATC 2 cut(s) 692, 1002
SfcI CTRYAG 1 cut(s) 1109
SinI GGWCC 2 cut(s) 646, 865
SmiMI CAYNNNNRTG 1 cut(s) 507
SmlI CTYRAG 1 cut(s) 665
SmoI CTYRAG 1 cut(s) 665
Sse9I AATT 4 cut(s) 611, 792, 910, 1446
SsiI CCGC 1 cut(s) 797
SspMI CTAG 3 cut(s) 18, 51, 929
SstI GAGCTC 1 cut(s) 762
StyD4I CCNGG 1 cut(s) 1048
StyI CCWWGG 1 cut(s) 1163
TaaI ACNGT 4 cut(s) 445, 721, 905, 1432
TaiI ACGT 1 cut(s) 702
TaqI TCGA 2 cut(s) 689, 1088
TaqII GACCGA 1 cut(s) 168
TasI AATT 4 cut(s) 611, 792, 910, 1446
TatI WGTACW 2 cut(s) 437, 537
TauI GCSGC 1 cut(s) 800
TfiI GAWTC 2 cut(s) 1045, 1126
Tru1I TTAA 1 cut(s) 549
Tru9I TTAA 1 cut(s) 549
TscAI CASTG 2 cut(s) 350, 807
TseI GCWGC 1 cut(s) 990
TspDTI ATGAA 4 cut(s) 237, 624, 1307, 1379
TspGWI ACGGA 2 cut(s) 691, 1214
TspRI CASTG 2 cut(s) 350, 807
Van91I CCANNNNNTGG 1 cut(s) 632
VpaK11BI GGWCC 2 cut(s) 646, 865
XspI CTAG 3 cut(s) 18, 51, 929
ZraI GACGTC 1 cut(s) 700
ZrmI AGTACT 2 cut(s) 439, 539
Zsp2I ATGCAT 1 cut(s) 829
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.