Rmu_sc0005570.1_g000004

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005570.1
OG0000060
Physical Location & Seq
Forward (+)
9984 .. 11774
1791 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005570.1_g000004.1.cds

Sequence Viewer

Length: 1251 bp
atggaagactccccaatatttggcagccctttaaagatgcaggctgtcctcagaacaaaggtggaattgaagctggtaactaagttgacaaagccggccaaacagaaagatgccaggaagatagcaatgctaatgatcacgtatctattcagcacattcttcttcagtcaaaccggagctcagattacatgggatatggtagccgtatgtgaatggattgagaccataaacgtgtacaactggccaagactgattctgaacttcttgatggaagggctacaaaagtataggaggaacagtccatctacaatgaatggatgccttcttctcatctattactggttccttgagaagaccaaggcaaagacctggatacctggaaacctggaacagctgtacaggaatgagaacttggccgtggatctgataaaagatggaccgtggtctgcgaaaattgaactggaagacctcgagttgggagatgaggtgcaggacacaccaagctttgacaactgggtaccccaggcaagccaagtggaagaggaacaaaatgaaaggctgacagggaatatgaaagaactaatcatggagatggaggtagccattagcgagacaaagccctccaaagaaatggagtcaaagctaggaaggcttgtcaaagaaaacgaggaactgaatgcgcagaacagagatctatgggccaagttaaaggttaccgatgagaggattaaagaactggagaatgaaaatagggcaaaaaataacctcatcagggccgtcggagaggaaacccattatgcagccagtgtgggaaagtcaacggatacggtgacgtcaacgtttcctactgcaatggaagtacctgaacaacaggatgaaagccgtttacaaccggagcaaccagaatgtaggaatcaagaggaaaatgaacagctcgataacatcataaggatgattgctgagaatgaagtgatggcattagttagaaaagaaaaacagaaagaagagacccatgccgaacagcaaaaacttaagaaaactctggagatacattctatagagaagaacgtgaagacataccggagggctgctaagaagcctagagaagaggagtgggagtatgacactccagaggaagcaaaaatgaggaagagagctgcacctaagaaaactggaatcatgccgcaggcccagagaaaagtggagaacaagagcaacatcaagggtgtcaactgcgataagcagacatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

416

Amino Acids

48.41

Weight (kDa)

5.61

Isoelectric Point (pI)

45.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 836
Acc16I TGCGCA 1 cut(s) 681
Acc65I GGTACC 1 cut(s) 517
AccB1I GGYRCC 1 cut(s) 517
AccB7I CCANNNNNTGG 1 cut(s) 20
AciI CCGC 1 cut(s) 1184
AclI AACGTT 1 cut(s) 839
AclWI GGATC 1 cut(s) 429
AcoI YGGCCR 3 cut(s) 96, 242, 414
AcuI CTGAAG 1 cut(s) 148
AcyI GRCGYC 1 cut(s) 833
AfaI GTAC 4 cut(s) 236, 398, 519, 861
AfiI CCNNNNNNNGG 4 cut(s) 20, 475, 723, 772
AflII CTTAAG 1 cut(s) 1031
AflIII ACRYGT 1 cut(s) 231
AgsI TTSAA 2 cut(s) 70, 458
AjnI CCWGG 5 cut(s) 113, 368, 376, 384, 522
AjuI GAANNNNNNNTTGG 2 cut(s) 395, 427
AluBI AGCT 7 cut(s) 73, 179, 394, 504, 643, 934, 1157
AluI AGCT 7 cut(s) 73, 179, 394, 504, 643, 934, 1157
Alw21I GWGCWC 1 cut(s) 181
Alw26I GTCTC 3 cut(s) 215, 605, 1001
AlwI GGATC 1 cut(s) 429
Ama87I CYCGRG 1 cut(s) 470
AoxI GGCC 6 cut(s) 96, 242, 414, 699, 774, 1188
ApeKI GCWGC 4 cut(s) 24, 800, 1088, 1157
Asp718I GGTACC 1 cut(s) 517
AspLEI GCGC 1 cut(s) 682
AspS9I GGNCC 4 cut(s) 437, 699, 774, 1189
AsuHPI GGTGA 1 cut(s) 841
AvaI CYCGRG 1 cut(s) 470
AvaII GGWCC 1 cut(s) 437
BalI TGGCCA 1 cut(s) 244
BanI GGYRCC 1 cut(s) 517
BanII GRGCYC 1 cut(s) 181
BbsI GAAGAC 4 cut(s) 12, 359, 471, 1079
Bbv12I GWGCWC 1 cut(s) 181
BbvI GCAGC 4 cut(s) 36, 812, 1075, 1144
BccI CCATC 5 cut(s) 262, 310, 428, 586, 967
BceAI ACGGC 4 cut(s) 188, 401, 761, 867
BciT130I CCWGG 5 cut(s) 115, 370, 378, 386, 524
BciVI GTATCC 2 cut(s) 366, 817
BclI TGATCA 1 cut(s) 135
BcoDI GTCTC 3 cut(s) 215, 605, 1001
BfaI CTAG 2 cut(s) 644, 1101
BfmI CTRYAG 1 cut(s) 1056
BfrI CTTAAG 1 cut(s) 1031
BfuI GTATCC 2 cut(s) 366, 817
BglII AGATCT 1 cut(s) 691
BisI GCNGC 5 cut(s) 25, 801, 1089, 1158, 1184
BlsI GCNGC 5 cut(s) 26, 802, 1090, 1159, 1185
Bme1390I CCNGG 5 cut(s) 115, 370, 378, 386, 524
Bme18I GGWCC 1 cut(s) 437
BmeT110I CYCGRG 1 cut(s) 470
BmgT120I GGNCC 4 cut(s) 437, 699, 774, 1189
BmiI GGNNCC 2 cut(s) 344, 519
BmrFI CCNGG 5 cut(s) 115, 370, 378, 386, 524
BmrI ACTGGG 1 cut(s) 523
BmsI GCATC 3 cut(s) 27, 100, 308
BmuI ACTGGG 1 cut(s) 523
BoxI GACNNNNGTC 1 cut(s) 442
BpiI GAAGAC 4 cut(s) 12, 359, 471, 1079
BpmI CTGGAG 3 cut(s) 758, 1064, 1113
BpuEI CTTGAG 1 cut(s) 368
BsaAI YACGTR 1 cut(s) 141
BsaHI GRCGYC 1 cut(s) 833
BsaI GGTCTC 2 cut(s) 215, 1001
BsaJI CCNNGG 4 cut(s) 357, 417, 440, 522
BsaWI WCCGGW 3 cut(s) 173, 892, 1080
BsaXI ACNNNNNCTCC 6 cut(s) 283, 313, 471, 501, 1103, 1133
Bsc4I CCNNNNNNNGG 4 cut(s) 20, 475, 723, 772
Bse118I RCCGGY 1 cut(s) 94
Bse1I ACTGG 7 cut(s) 245, 344, 465, 518, 741, 804, 1177
Bse3DI GCAATG 2 cut(s) 132, 858
BseBI CCWGG 5 cut(s) 115, 370, 378, 386, 524
BseDI CCNNGG 4 cut(s) 357, 417, 440, 522
BseGI GGATG 3 cut(s) 323, 880, 957
BseLI CCNNNNNNNGG 4 cut(s) 20, 475, 723, 772
BseMI GCAATG 2 cut(s) 132, 858
BseMII CTCAG 3 cut(s) 64, 194, 951
BseNI ACTGG 7 cut(s) 245, 344, 465, 518, 741, 804, 1177
BseRI GAGGAG 1 cut(s) 1124
BseXI GCAGC 4 cut(s) 36, 812, 1075, 1144
BsgI GTGCAG 2 cut(s) 509, 1143
BshFI GGCC 6 cut(s) 98, 244, 416, 701, 776, 1190
BshNI GGYRCC 1 cut(s) 517
BsiHKAI GWGCWC 1 cut(s) 181
BsiHKCI CYCGRG 1 cut(s) 470
BsiSI CCGG 4 cut(s) 95, 174, 893, 1081
BslI CCNNNNNNNGG 4 cut(s) 20, 475, 723, 772
BsmAI GTCTC 3 cut(s) 215, 605, 1001
BsmI GAATGC 1 cut(s) 682
BsnI GGCC 6 cut(s) 98, 244, 416, 701, 776, 1190
Bso31I GGTCTC 2 cut(s) 215, 1001
BsoBI CYCGRG 1 cut(s) 470
Bsp1286I GDGCHC 1 cut(s) 181
Bsp1407I TGTACA 2 cut(s) 234, 396
Bsp143I GATC 3 cut(s) 135, 421, 691
BspACI CCGC 1 cut(s) 1184
BspANI GGCC 6 cut(s) 98, 244, 416, 701, 776, 1190
BspCNI CTCAG 3 cut(s) 63, 193, 952
BspLI GGNNCC 2 cut(s) 344, 519
BspPI GGATC 1 cut(s) 429
BspT107I GGYRCC 1 cut(s) 517
BspTI CTTAAG 1 cut(s) 1031
BspTNI GGTCTC 2 cut(s) 215, 1001
BsrDI GCAATG 2 cut(s) 132, 858
BsrFI RCCGGY 1 cut(s) 94
BsrGI TGTACA 2 cut(s) 234, 396
BsrI ACTGG 7 cut(s) 245, 344, 465, 518, 741, 804, 1177
BssAI RCCGGY 1 cut(s) 94
BssECI CCNNGG 4 cut(s) 357, 417, 440, 522
BssMI GATC 3 cut(s) 135, 421, 691
BssNI GRCGYC 1 cut(s) 833
BssT1I CCWWGG 1 cut(s) 357
Bst2UI CCWGG 5 cut(s) 115, 370, 378, 386, 524
Bst4CI ACNGT 3 cut(s) 299, 441, 829
Bst6I CTCTTC 4 cut(s) 534, 999, 1101, 1145
BstACI GRCGYC 1 cut(s) 833
BstAFI CTTAAG 1 cut(s) 1031
BstAUI TGTACA 2 cut(s) 234, 396
BstBAI YACGTR 1 cut(s) 141
BstC8I GCNNGC 4 cut(s) 42, 96, 529, 1188
BstDEI CTNAG 6 cut(s) 50, 81, 180, 960, 1092, 1164
BstDSI CCRYGG 2 cut(s) 417, 440
BstEII GGTNACC 1 cut(s) 712
BstF5I GGATG 3 cut(s) 323, 880, 957
BstHHI GCGC 1 cut(s) 682
BstKTI GATC 3 cut(s) 138, 424, 694
BstMAI GTCTC 3 cut(s) 215, 605, 1001
BstMBI GATC 3 cut(s) 135, 421, 691
BstMWI GCNNNNNNNGC 1 cut(s) 649
BstNI CCWGG 5 cut(s) 115, 370, 378, 386, 524
BstPAI GACNNNNGTC 1 cut(s) 442
BstPI GGTNACC 1 cut(s) 712
BstSCI CCNGG 5 cut(s) 113, 368, 376, 384, 522
BstSFI CTRYAG 1 cut(s) 1056
BstV1I GCAGC 4 cut(s) 36, 812, 1075, 1144
BstV2I GAAGAC 4 cut(s) 12, 359, 471, 1079
BstX2I RGATCY 2 cut(s) 421, 691
BstXI CCANNNNNNTGG 1 cut(s) 631
BstYI RGATCY 2 cut(s) 421, 691
BsuI GTATCC 2 cut(s) 366, 817
BsuRI GGCC 6 cut(s) 98, 244, 416, 701, 776, 1190
BtgI CCRYGG 2 cut(s) 417, 440
BtsCI GGATG 3 cut(s) 323, 880, 957
BtsIMutI CAGTG 1 cut(s) 811
Cac8I GCNNGC 4 cut(s) 42, 96, 529, 1188
CfoI GCGC 1 cut(s) 682
Cfr10I RCCGGY 1 cut(s) 94
Cfr13I GGNCC 4 cut(s) 437, 699, 774, 1189
Csp6I GTAC 4 cut(s) 235, 397, 518, 860
CspCI CAANNNNNGTGG 2 cut(s) 516, 551
CviAII CATG 4 cut(s) 189, 586, 1013, 1180
CviQI GTAC 4 cut(s) 235, 397, 518, 860
DdeI CTNAG 6 cut(s) 50, 81, 180, 960, 1092, 1164
DpnI GATC 3 cut(s) 137, 423, 693
DpnII GATC 3 cut(s) 135, 421, 691
DraI TTTAAA 1 cut(s) 33
EaeI YGGCCR 3 cut(s) 96, 242, 414
Eam1104I CTCTTC 4 cut(s) 534, 999, 1101, 1145
EarI CTCTTC 4 cut(s) 534, 999, 1101, 1145
Ecl136II GAGCTC 1 cut(s) 179
Eco130I CCWWGG 1 cut(s) 357
Eco24I GRGCYC 1 cut(s) 181
Eco31I GGTCTC 2 cut(s) 215, 1001
Eco47I GGWCC 1 cut(s) 437
Eco53kI GAGCTC 1 cut(s) 179
Eco57I CTGAAG 1 cut(s) 148
Eco88I CYCGRG 1 cut(s) 470
Eco91I GGTNACC 1 cut(s) 712
EcoICRI GAGCTC 1 cut(s) 179
EcoO65I GGTNACC 1 cut(s) 712
EcoRII CCWGG 5 cut(s) 113, 368, 376, 384, 522
EcoT14I CCWWGG 1 cut(s) 357
EcoT38I GRGCYC 1 cut(s) 181
ErhI CCWWGG 1 cut(s) 357
FaeI CATG 4 cut(s) 192, 589, 1016, 1183
FatI CATG 4 cut(s) 188, 585, 1012, 1179
FbaI TGATCA 1 cut(s) 135
Fnu4HI GCNGC 5 cut(s) 25, 801, 1089, 1158, 1184
FokI GGATG 3 cut(s) 330, 887, 964
FriOI GRGCYC 1 cut(s) 181
Fsp4HI GCNGC 5 cut(s) 25, 801, 1089, 1158, 1184
FspBI CTAG 2 cut(s) 644, 1101
FspI TGCGCA 1 cut(s) 681
GlaI GCGC 1 cut(s) 681
GluI GCNGC 5 cut(s) 25, 801, 1089, 1158, 1184
GsuI CTGGAG 3 cut(s) 758, 1064, 1113
HaeIII GGCC 6 cut(s) 98, 244, 416, 701, 776, 1190
HapII CCGG 4 cut(s) 95, 174, 893, 1081
HhaI GCGC 1 cut(s) 682
Hin1I GRCGYC 1 cut(s) 833
Hin1II CATG 4 cut(s) 192, 589, 1016, 1183
Hin6I GCGC 1 cut(s) 680
HinP1I GCGC 1 cut(s) 680
HincII GTYRAC 4 cut(s) 87, 819, 837, 1231
HindII GTYRAC 4 cut(s) 87, 819, 837, 1231
HindIII AAGCTT 1 cut(s) 502
HinfI GANTC 5 cut(s) 8, 253, 635, 913, 1176
HpaII CCGG 4 cut(s) 95, 174, 893, 1081
HphI GGTGA 1 cut(s) 841
Hpy166II GTNNAC 6 cut(s) 87, 235, 819, 837, 887, 1231
Hpy188I TCNGA 5 cut(s) 53, 183, 258, 426, 782
Hpy188III TCNNGA 4 cut(s) 265, 917, 1043, 1130
Hpy8I GTNNAC 6 cut(s) 87, 235, 819, 837, 887, 1231
Hpy99I CGWCG 1 cut(s) 782
HpyAV CCTTC 3 cut(s) 266, 332, 642
HpyCH4III ACNGT 3 cut(s) 299, 441, 829
HpyCH4IV ACGT 5 cut(s) 140, 231, 833, 839, 1068
HpyCH4V TGCA 5 cut(s) 40, 490, 800, 851, 1160
HpyF10VI GCNNNNNNNGC 1 cut(s) 649
HpyF3I CTNAG 6 cut(s) 50, 81, 180, 960, 1092, 1164
HpySE526I ACGT 5 cut(s) 140, 231, 833, 839, 1068
Hsp92I GRCGYC 1 cut(s) 833
Hsp92II CATG 4 cut(s) 192, 589, 1016, 1183
HspAI GCGC 1 cut(s) 680
KpnI GGTACC 1 cut(s) 521
KroI GCCGGC 1 cut(s) 94
KroNI GCCGGC 1 cut(s) 96
Ksp22I TGATCA 1 cut(s) 135
Kzo9I GATC 3 cut(s) 135, 421, 691
LmnI GCTCC 2 cut(s) 176, 895
Lsp1109I GCAGC 4 cut(s) 36, 812, 1075, 1144
LweI GCATC 3 cut(s) 27, 100, 308
MaeI CTAG 2 cut(s) 644, 1101
MaeII ACGT 5 cut(s) 140, 231, 833, 839, 1068
MaeIII GTNAC 3 cut(s) 76, 712, 829
MalI GATC 3 cut(s) 137, 423, 693
MboI GATC 3 cut(s) 135, 421, 691
MflI RGATCY 2 cut(s) 421, 691
MhlI GDGCHC 1 cut(s) 181
MlsI TGGCCA 1 cut(s) 244
MluCI AATT 2 cut(s) 65, 453
MluNI TGGCCA 1 cut(s) 244
MlyI GAGTC 2 cut(s) 2, 644
MmeI TCCRAC 1 cut(s) 760
Mox20I TGGCCA 1 cut(s) 244
MroNI GCCGGC 1 cut(s) 94
MscI TGGCCA 1 cut(s) 244
MseI TTAA 4 cut(s) 32, 707, 729, 1032
MslI CAYNNNNRTG 3 cut(s) 230, 590, 950
Msp20I TGGCCA 1 cut(s) 244
MspA1I CMGCKG 1 cut(s) 394
MspCI CTTAAG 1 cut(s) 1031
MspI CCGG 4 cut(s) 95, 174, 893, 1081
MspR9I CCNGG 5 cut(s) 115, 370, 378, 386, 524
Mva1269I GAATGC 1 cut(s) 682
MvaI CCWGG 5 cut(s) 115, 370, 378, 386, 524
MwoI GCNNNNNNNGC 1 cut(s) 649
NaeI GCCGGC 1 cut(s) 96
NdeII GATC 3 cut(s) 135, 421, 691
NgoMIV GCCGGC 1 cut(s) 94
NlaIII CATG 4 cut(s) 192, 589, 1016, 1183
NlaIV GGNNCC 2 cut(s) 344, 519
NmuCI GTSAC 1 cut(s) 829
NsbI TGCGCA 1 cut(s) 681
PaeR7I CTCGAG 1 cut(s) 470
PctI GAATGC 1 cut(s) 682
PdiI GCCGGC 1 cut(s) 96
PfeI GAWTC 3 cut(s) 253, 913, 1176
PflMI CCANNNNNTGG 1 cut(s) 20
PkrI GCNGC 5 cut(s) 26, 802, 1090, 1159, 1185
PleI GAGTC 2 cut(s) 2, 643
PpsI GAGTC 2 cut(s) 2, 643
Ppu21I YACGTR 1 cut(s) 141
PshAI GACNNNNGTC 1 cut(s) 442
Psp124BI GAGCTC 1 cut(s) 181
Psp1406I AACGTT 1 cut(s) 839
Psp6I CCWGG 5 cut(s) 113, 368, 376, 384, 522
PspEI GGTNACC 1 cut(s) 712
PspGI CCWGG 5 cut(s) 113, 368, 376, 384, 522
PspN4I GGNNCC 2 cut(s) 344, 519
PspPI GGNCC 4 cut(s) 437, 699, 774, 1189
PspXI VCTCGAGB 1 cut(s) 470
PsuI RGATCY 2 cut(s) 421, 691
PvuII CAGCTG 1 cut(s) 394
RsaI GTAC 4 cut(s) 236, 398, 519, 861
RsaNI GTAC 4 cut(s) 235, 397, 518, 860
RseI CAYNNNNRTG 3 cut(s) 230, 590, 950
SacI GAGCTC 1 cut(s) 181
SaqAI TTAA 4 cut(s) 32, 707, 729, 1032
SatI GCNGC 5 cut(s) 25, 801, 1089, 1158, 1184
Sau3AI GATC 3 cut(s) 135, 421, 691
Sau96I GGNCC 4 cut(s) 437, 699, 774, 1189
SchI GAGTC 2 cut(s) 2, 644
ScrFI CCNGG 5 cut(s) 115, 370, 378, 386, 524
SduI GDGCHC 1 cut(s) 181
SfaNI GCATC 3 cut(s) 27, 100, 308
SfcI CTRYAG 1 cut(s) 1056
Sfr274I CTCGAG 1 cut(s) 470
SinI GGWCC 1 cut(s) 437
SlaI CTCGAG 1 cut(s) 470
SmiMI CAYNNNNRTG 3 cut(s) 230, 590, 950
SmlI CTYRAG 3 cut(s) 347, 470, 1031
SmoI CTYRAG 3 cut(s) 347, 470, 1031
Sse9I AATT 2 cut(s) 65, 453
SsiI CCGC 1 cut(s) 1184
SspI AATATT 1 cut(s) 18
SspMI CTAG 2 cut(s) 644, 1101
SstI GAGCTC 1 cut(s) 181
StyD4I CCNGG 5 cut(s) 113, 368, 376, 384, 522
StyI CCWWGG 1 cut(s) 357
TaaI ACNGT 3 cut(s) 299, 441, 829
TaiI ACGT 5 cut(s) 143, 234, 836, 842, 1071
TaqI TCGA 2 cut(s) 471, 936
TasI AATT 2 cut(s) 65, 453
TatI WGTACW 2 cut(s) 234, 396
TauI GCSGC 1 cut(s) 1186
TfiI GAWTC 3 cut(s) 253, 913, 1176
Tru1I TTAA 4 cut(s) 32, 707, 729, 1032
Tru9I TTAA 4 cut(s) 32, 707, 729, 1032
TscAI CASTG 1 cut(s) 811
TseFI GTSAC 1 cut(s) 829
TseI GCWGC 4 cut(s) 24, 800, 1088, 1157
Tsp45I GTSAC 1 cut(s) 829
TspDTI ATGAA 7 cut(s) 326, 567, 587, 759, 891, 942, 981
TspGWI ACGGA 1 cut(s) 836
TspRI CASTG 1 cut(s) 811
Van91I CCANNNNNTGG 1 cut(s) 20
Vha464I CTTAAG 1 cut(s) 1031
VpaK11BI GGWCC 1 cut(s) 437
XhoI CTCGAG 1 cut(s) 470
XspI CTAG 2 cut(s) 644, 1101
ZraI GACGTC 1 cut(s) 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.