Rmu_sc0008004.1_g000007

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008004.1
OG0000060
Physical Location & Seq
Reverse (-)
33214 .. 36957
3744 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008004.1_g000007.1.cds

Sequence Viewer

Length: 1959 bp
atgatagatccattctatcgtggaaagatcacagaacaacagttgataaagaatgaggtggatctgaaaatcattctgaattgttttgacacaagcaagaagaagttcgtatttggagaaatacaaatgagtattacagaagatgatgtgaaggcaatatttgatctccctactgagggagaagaactaaaattcaacaagctggaaaaaagagatgagaagctcagtcgactcttgaaaactgcgaaccaggattatgtgctgaaaacagcagtacaaaatgcattgacagctgagctggccaaggtgcaagagaaaaataaaaaagatggagctggaaaggcaaatagaaaaaaaaagggacagatgaagaaccgcaaaaccggcaccaatatatactgggatttgatcaatgtttgtgctgatattgaaaagattaacatgtataattggtcaaaaattgtacttcagtttctgctcgagggaattaagaagcaccagaagaatgtgtcgaaaacactgtctggctgccttgttctcatttatgtgagaatagttcctcaagcaaaccaaaagttggaagaagaaagggtaaggttggcccgaaacctgaaagaggcaatccaagagctggagggggtactggcagatgaaacaggcaaggaaaacaaagaggagaagttcaaaaggctggctgcagcaaatgagcagcttataaaacagaatgaagaaatttggaacaagctcaaagctgctgatgaaaagattgcaaacttggaaagtagagcaatgatgaacaagactgagataggtattcagaaagcaggttgtcacgatcaaccaatagaaacaacagaggagcaagtggaagcacaagctgaatcaccagaacaggagaagagcacggaacctgaagaacaagaaggaggtggagaaaaagtagacaagcatggaagaaaagtggcagtagagaaagaaacagttgctgaggtaagggcttcagaatctgaagaaaaagaagaaaaaggaggagaaaaagcagacaagcatgacaaagaagtggcaatagagaaagaaacagttgctgaggtaagggcttcacaatctgaagaaaaagaagaaaaaagaggagaaaaagtagacaagcatgaaaaagaagtggcagtagagaaagaaacagttgctgaggtaaggagcacagacgctggaaaagaagaagaaaaggaaggtcatatgaaaaagaggaaggataccctcaaagaaaaggatgtaaggtatcagtccgacggtccagatcaatgtaagaaatactcaaagaggcggaagataggagcaggaaaaaatggtgagcagagcaagaaagaagaagcaaaagatattgtggagaacaacatcaaaattgatggcctcaagtgcgataaggaaacatggaaaacattgaaggttgaagtcgctcgtcatattgaactgttcttcaatacagtcaaagggaatatggatcgttattggggaaaatacgaagactcaaaagtcaccaaggaagatttgattcacattatagaagagaaagctgtgaacatcaatgcaagttatataaaaaaatttcttgaagatttgaacaagatgaaagtgaaaaaagaggaagtaagaaataaatgggaatatgatgtaaatattagaaagtgggtgtgcgttgctacaccattgacggacaaagaaaaagaggtcaagaagtggatttgggataaggggataggcaaagacagttatgatcttggggaagatactgagtgcccacaacaaagaccctcatcggatgattctggaccttttgtactgcacttcatggagagcctcgcaaatggcgagaaactgagcacagaaaaggccaacaacatgaggcaaagaatccttgagaggttcgccaaacatgaagcagcgtggaccattggaaagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

652

Amino Acids

75.09

Weight (kDa)

6.66

Isoelectric Point (pI)

43.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 716
AasI GACNNNNNNGTC 1 cut(s) 1529
Acc36I ACCTGC 1 cut(s) 815
AccB1I GGYRCC 1 cut(s) 386
AccB7I CCANNNNNTGG 2 cut(s) 577, 631
AccI GTMKAC 3 cut(s) 229, 942, 1140
AciI CCGC 2 cut(s) 376, 1321
AclWI GGATC 3 cut(s) 2, 69, 1506
AcoI YGGCCR 1 cut(s) 300
AcsI RAATTY 3 cut(s) 191, 732, 1601
AcuI CTGAAG 5 cut(s) 452, 933, 984, 1029, 1128
AfaI GTAC 4 cut(s) 276, 465, 642, 1836
AfiI CCNNNNNNNGG 5 cut(s) 175, 176, 577, 616, 631
AflIII ACRYGT 1 cut(s) 441
AjnI CCWGG 1 cut(s) 249
Alw21I GWGCWC 3 cut(s) 905, 1199, 1880
AlwI GGATC 3 cut(s) 2, 69, 1506
AlwNI CAGNNNCTG 6 cut(s) 475, 986, 1007, 1085, 1184, 1205
Ama87I CYCGRG 1 cut(s) 479
AoxI GGCC 4 cut(s) 300, 600, 1405, 1887
ApeKI GCWGC 6 cut(s) 528, 695, 698, 709, 752, 1937
ApoI RAATTY 3 cut(s) 191, 732, 1601
ArsI GACNNNNNNTTYG 2 cut(s) 506, 538
Asp700I GAANNNNTTC 1 cut(s) 104
AspS9I GGNCC 4 cut(s) 601, 1289, 1826, 1944
AsuHPI GGTGA 3 cut(s) 876, 1358, 1525
AvaI CYCGRG 1 cut(s) 479
AvaII GGWCC 3 cut(s) 1289, 1826, 1944
BaeGI GKGCMC 1 cut(s) 1796
BalI TGGCCA 1 cut(s) 302
BanI GGYRCC 1 cut(s) 386
BbsI GAAGAC 1 cut(s) 1527
Bbv12I GWGCWC 3 cut(s) 905, 1199, 1880
BbvCI CCTCAGC 3 cut(s) 987, 1086, 1185
BbvI GCAGC 6 cut(s) 515, 682, 710, 721, 739, 1949
BccI CCATC 2 cut(s) 323, 1397
BciT130I CCWGG 1 cut(s) 251
BciVI GTATCC 1 cut(s) 1243
BclI TGATCA 1 cut(s) 408
BfmI CTRYAG 1 cut(s) 696
BfuAI ACCTGC 1 cut(s) 815
BfuI GTATCC 1 cut(s) 1243
BisI GCNGC 6 cut(s) 529, 696, 699, 710, 753, 1938
BlpI GCTNAGC 1 cut(s) 294
BlsI GCNGC 6 cut(s) 530, 697, 700, 711, 754, 1939
Bme1390I CCNGG 1 cut(s) 251
Bme18I GGWCC 3 cut(s) 1289, 1826, 1944
BmeT110I CYCGRG 1 cut(s) 479
BmgT120I GGNCC 4 cut(s) 601, 1289, 1826, 1944
BmiI GGNNCC 2 cut(s) 388, 909
BmrFI CCNGG 1 cut(s) 251
BmrI ACTGGG 1 cut(s) 409
BmuI ACTGGG 1 cut(s) 409
BpiI GAAGAC 1 cut(s) 1527
BpmI CTGGAG 1 cut(s) 653
Bpu10I CCTNAGC 3 cut(s) 987, 1086, 1185
Bpu1102I GCTNAGC 1 cut(s) 294
BpuEI CTTGAG 3 cut(s) 546, 1394, 1934
BsaJI CCNNGG 2 cut(s) 303, 1536
BsaXI ACNNNNNCTCC 4 cut(s) 924, 954, 1122, 1152
Bsc4I CCNNNNNNNGG 5 cut(s) 175, 176, 577, 616, 631
Bse118I RCCGGY 1 cut(s) 383
Bse1I ACTGG 2 cut(s) 404, 648
Bse3DI GCAATG 1 cut(s) 795
BseBI CCWGG 1 cut(s) 251
BseDI CCNNGG 2 cut(s) 303, 1536
BseGI GGATG 2 cut(s) 1273, 1822
BseLI CCNNNNNNNGG 5 cut(s) 175, 176, 577, 616, 631
BseMI GCAATG 1 cut(s) 795
BseMII CTCAG 9 cut(s) 165, 238, 285, 795, 978, 1077, 1176, 1779, 1865
BseNI ACTGG 2 cut(s) 404, 648
BseRI GAGGAG 4 cut(s) 689, 872, 1044, 1143
BseSI GKGCMC 1 cut(s) 1796
BseXI GCAGC 6 cut(s) 515, 682, 710, 721, 739, 1949
BsgI GTGCAG 1 cut(s) 1823
BshFI GGCC 4 cut(s) 302, 602, 1407, 1889
BshNI GGYRCC 1 cut(s) 386
BsiHKAI GWGCWC 3 cut(s) 905, 1199, 1880
BsiHKCI CYCGRG 1 cut(s) 479
BsiSI CCGG 1 cut(s) 384
BslFI GGGAC 1 cut(s) 375
BslI CCNNNNNNNGG 5 cut(s) 175, 176, 577, 616, 631
BsmFI GGGAC 1 cut(s) 375
BsnI GGCC 4 cut(s) 302, 602, 1407, 1889
BsoBI CYCGRG 1 cut(s) 479
Bsp1286I GDGCHC 4 cut(s) 905, 1199, 1796, 1880
Bsp143I GATC 9 cut(s) 7, 27, 61, 163, 408, 835, 1294, 1498, 1771
Bsp1720I GCTNAGC 1 cut(s) 294
BspACI CCGC 2 cut(s) 376, 1321
BspANI GGCC 4 cut(s) 302, 602, 1407, 1889
BspCNI CTCAG 9 cut(s) 166, 237, 286, 796, 979, 1078, 1177, 1780, 1866
BspLI GGNNCC 2 cut(s) 388, 909
BspMAI CTGCAG 1 cut(s) 700
BspMI ACCTGC 1 cut(s) 815
BspPI GGATC 3 cut(s) 2, 69, 1506
BspQI GCTCTTC 1 cut(s) 893
BspT107I GGYRCC 1 cut(s) 386
BsrDI GCAATG 1 cut(s) 795
BsrFI RCCGGY 1 cut(s) 383
BsrI ACTGG 2 cut(s) 404, 648
BssAI RCCGGY 1 cut(s) 383
BssECI CCNNGG 2 cut(s) 303, 1536
BssMI GATC 9 cut(s) 7, 27, 61, 163, 408, 835, 1294, 1498, 1771
BssT1I CCWWGG 2 cut(s) 303, 1536
Bst2UI CCWGG 1 cut(s) 251
Bst4CI ACNGT 9 cut(s) 42, 522, 982, 1081, 1180, 1289, 1470, 1483, 1766
Bst6I CTCTTC 2 cut(s) 893, 1557
BstC8I GCNNGC 2 cut(s) 300, 693
BstDEI CTNAG 9 cut(s) 174, 224, 294, 804, 987, 1086, 1185, 1788, 1874
BstENI CCTNNNNNAGG 1 cut(s) 614
BstF5I GGATG 2 cut(s) 1273, 1822
BstKTI GATC 9 cut(s) 10, 30, 64, 166, 411, 838, 1297, 1501, 1774
BstMBI GATC 9 cut(s) 7, 27, 61, 163, 408, 835, 1294, 1498, 1771
BstMWI GCNNNNNNNGC 5 cut(s) 290, 299, 341, 384, 1413
BstNI CCWGG 1 cut(s) 251
BstNSI RCATGY 1 cut(s) 445
BstSCI CCNGG 1 cut(s) 249
BstSFI CTRYAG 1 cut(s) 696
BstSLI GKGCMC 1 cut(s) 1796
BstV1I GCAGC 6 cut(s) 515, 682, 710, 721, 739, 1949
BstV2I GAAGAC 1 cut(s) 1527
BstX2I RGATCY 2 cut(s) 7, 61
BstYI RGATCY 2 cut(s) 7, 61
BsuI GTATCC 1 cut(s) 1243
BsuRI GGCC 4 cut(s) 302, 602, 1407, 1889
BtsCI GGATG 2 cut(s) 1273, 1822
BtsIMutI CAGTG 1 cut(s) 518
BveI ACCTGC 1 cut(s) 815
Cac8I GCNNGC 2 cut(s) 300, 693
CaiI CAGNNNCTG 6 cut(s) 475, 986, 1007, 1085, 1184, 1205
Cfr10I RCCGGY 1 cut(s) 383
Cfr13I GGNCC 4 cut(s) 601, 1289, 1826, 1944
CseI GACGC 1 cut(s) 1211
Csp6I GTAC 4 cut(s) 275, 464, 641, 1835
CviAII CATG 8 cut(s) 442, 950, 1049, 1148, 1428, 1846, 1897, 1931
CviQI GTAC 4 cut(s) 275, 464, 641, 1835
DdeI CTNAG 9 cut(s) 174, 224, 294, 804, 987, 1086, 1185, 1788, 1874
DpnI GATC 9 cut(s) 9, 29, 63, 165, 410, 837, 1296, 1500, 1773
DpnII GATC 9 cut(s) 7, 27, 61, 163, 408, 835, 1294, 1498, 1771
DrdI GACNNNNNNGTC 1 cut(s) 1529
DseDI GACNNNNNNGTC 1 cut(s) 1529
EaeI YGGCCR 1 cut(s) 300
Eam1104I CTCTTC 2 cut(s) 893, 1557
EarI CTCTTC 2 cut(s) 893, 1557
EciI GGCGGA 1 cut(s) 1336
Eco130I CCWWGG 2 cut(s) 303, 1536
Eco47I GGWCC 3 cut(s) 1289, 1826, 1944
Eco57I CTGAAG 5 cut(s) 452, 933, 984, 1029, 1128
Eco88I CYCGRG 1 cut(s) 479
EcoNI CCTNNNNNAGG 1 cut(s) 614
EcoRII CCWGG 1 cut(s) 249
EcoT14I CCWWGG 2 cut(s) 303, 1536
EcoT22I ATGCAT 1 cut(s) 286
ErhI CCWWGG 2 cut(s) 303, 1536
FaeI CATG 8 cut(s) 445, 953, 1052, 1151, 1431, 1849, 1900, 1934
FaqI GGGAC 1 cut(s) 375
FatI CATG 8 cut(s) 441, 949, 1048, 1147, 1427, 1845, 1896, 1930
FauNDI CATATG 1 cut(s) 1233
FbaI TGATCA 1 cut(s) 408
FblI GTMKAC 3 cut(s) 229, 942, 1140
Fnu4HI GCNGC 6 cut(s) 529, 696, 699, 710, 753, 1938
FokI GGATG 2 cut(s) 1280, 1829
Fsp4HI GCNGC 6 cut(s) 529, 696, 699, 710, 753, 1938
GluI GCNGC 6 cut(s) 529, 696, 699, 710, 753, 1938
GsuI CTGGAG 1 cut(s) 653
HaeIII GGCC 4 cut(s) 302, 602, 1407, 1889
HapII CCGG 1 cut(s) 384
HgaI GACGC 1 cut(s) 1211
Hin1II CATG 8 cut(s) 445, 953, 1052, 1151, 1431, 1849, 1900, 1934
HincII GTYRAC 1 cut(s) 230
HindII GTYRAC 1 cut(s) 230
HinfI GANTC 7 cut(s) 231, 881, 1004, 1523, 1549, 1820, 1908
HpaII CCGG 1 cut(s) 384
HphI GGTGA 3 cut(s) 876, 1358, 1525
Hpy166II GTNNAC 5 cut(s) 230, 943, 1141, 1576, 1944
Hpy188I TCNGA 8 cut(s) 66, 78, 819, 1003, 1009, 1108, 1285, 1816
Hpy188III TCNNGA 6 cut(s) 235, 833, 1292, 1607, 1729, 1824
Hpy8I GTNNAC 5 cut(s) 230, 943, 1141, 1576, 1944
Hpy99I CGWCG 1 cut(s) 1289
HpyAV CCTTC 5 cut(s) 145, 917, 1220, 1240, 1435
HpyCH4III ACNGT 9 cut(s) 42, 522, 982, 1081, 1180, 1289, 1470, 1483, 1766
HpyCH4V TGCA 6 cut(s) 284, 310, 698, 770, 1586, 1840
HpyF10VI GCNNNNNNNGC 5 cut(s) 290, 299, 341, 384, 1413
HpyF3I CTNAG 9 cut(s) 174, 224, 294, 804, 987, 1086, 1185, 1788, 1874
Hsp92II CATG 8 cut(s) 445, 953, 1052, 1151, 1431, 1849, 1900, 1934
Ksp22I TGATCA 1 cut(s) 408
Kzo9I GATC 9 cut(s) 7, 27, 61, 163, 408, 835, 1294, 1498, 1771
LguI GCTCTTC 1 cut(s) 893
LmnI GCTCC 4 cut(s) 332, 859, 1194, 1331
Lsp1109I GCAGC 6 cut(s) 515, 682, 710, 721, 739, 1949
MaeIII GTNAC 2 cut(s) 830, 1531
MalI GATC 9 cut(s) 9, 29, 63, 165, 410, 837, 1296, 1500, 1773
MboI GATC 9 cut(s) 7, 27, 61, 163, 408, 835, 1294, 1498, 1771
MflI RGATCY 2 cut(s) 7, 61
MhlI GDGCHC 4 cut(s) 905, 1199, 1796, 1880
MlsI TGGCCA 1 cut(s) 302
MluCI AATT 8 cut(s) 79, 191, 448, 459, 486, 732, 1398, 1601
MluNI TGGCCA 1 cut(s) 302
MlyI GAGTC 2 cut(s) 225, 1517
MmeI TCCRAC 2 cut(s) 558, 1308
Mox20I TGGCCA 1 cut(s) 302
Mph1103I ATGCAT 1 cut(s) 286
MroXI GAANNNNTTC 1 cut(s) 104
MscI TGGCCA 1 cut(s) 302
MseI TTAA 2 cut(s) 438, 489
MslI CAYNNNNRTG 1 cut(s) 545
Msp20I TGGCCA 1 cut(s) 302
MspA1I CMGCKG 1 cut(s) 293
MspI CCGG 1 cut(s) 384
MspR9I CCNGG 1 cut(s) 251
MvaI CCWGG 1 cut(s) 251
MwoI GCNNNNNNNGC 5 cut(s) 290, 299, 341, 384, 1413
NdeI CATATG 1 cut(s) 1233
NdeII GATC 9 cut(s) 7, 27, 61, 163, 408, 835, 1294, 1498, 1771
NlaIII CATG 8 cut(s) 445, 953, 1052, 1151, 1431, 1849, 1900, 1934
NlaIV GGNNCC 2 cut(s) 388, 909
NmuCI GTSAC 2 cut(s) 830, 1531
NsiI ATGCAT 1 cut(s) 286
NspI RCATGY 1 cut(s) 445
PaeR7I CTCGAG 1 cut(s) 479
PciI ACATGT 1 cut(s) 441
PciSI GCTCTTC 1 cut(s) 893
PcsI WCGNNNNNNNCGW 1 cut(s) 1863
PdmI GAANNNNTTC 1 cut(s) 104
PfeI GAWTC 5 cut(s) 881, 1004, 1549, 1820, 1908
PflMI CCANNNNNTGG 2 cut(s) 577, 631
PkrI GCNGC 6 cut(s) 530, 697, 700, 711, 754, 1939
PleI GAGTC 2 cut(s) 225, 1517
PpsI GAGTC 2 cut(s) 225, 1517
PscI ACATGT 1 cut(s) 441
PsiI TTATAA 1 cut(s) 716
Psp6I CCWGG 1 cut(s) 249
PspGI CCWGG 1 cut(s) 249
PspN4I GGNNCC 2 cut(s) 388, 909
PspPI GGNCC 4 cut(s) 601, 1289, 1826, 1944
PspXI VCTCGAGB 1 cut(s) 479
PstI CTGCAG 1 cut(s) 700
PstNI CAGNNNCTG 6 cut(s) 475, 986, 1007, 1085, 1184, 1205
PsuI RGATCY 2 cut(s) 7, 61
PvuII CAGCTG 1 cut(s) 293
RsaI GTAC 4 cut(s) 276, 465, 642, 1836
RsaNI GTAC 4 cut(s) 275, 464, 641, 1835
RseI CAYNNNNRTG 1 cut(s) 545
SalI GTCGAC 1 cut(s) 228
SapI GCTCTTC 1 cut(s) 893
SaqAI TTAA 2 cut(s) 438, 489
SatI GCNGC 6 cut(s) 529, 696, 699, 710, 753, 1938
Sau3AI GATC 9 cut(s) 7, 27, 61, 163, 408, 835, 1294, 1498, 1771
Sau96I GGNCC 4 cut(s) 601, 1289, 1826, 1944
SchI GAGTC 2 cut(s) 225, 1517
ScrFI CCNGG 1 cut(s) 251
SduI GDGCHC 4 cut(s) 905, 1199, 1796, 1880
SfcI CTRYAG 1 cut(s) 696
Sfr274I CTCGAG 1 cut(s) 479
SinI GGWCC 3 cut(s) 1289, 1826, 1944
SlaI CTCGAG 1 cut(s) 479
SmiMI CAYNNNNRTG 1 cut(s) 545
SmlI CTYRAG 4 cut(s) 479, 561, 1409, 1913
SmoI CTYRAG 4 cut(s) 479, 561, 1409, 1913
Sse9I AATT 8 cut(s) 79, 191, 448, 459, 486, 732, 1398, 1601
SsiI CCGC 2 cut(s) 376, 1321
SspI AATATT 2 cut(s) 159, 1675
StyD4I CCNGG 1 cut(s) 249
StyI CCWWGG 2 cut(s) 303, 1536
TaaI ACNGT 9 cut(s) 42, 522, 982, 1081, 1180, 1289, 1470, 1483, 1766
TaqI TCGA 3 cut(s) 229, 480, 512
TasI AATT 8 cut(s) 79, 191, 448, 459, 486, 732, 1398, 1601
TatI WGTACW 3 cut(s) 274, 463, 1834
TfiI GAWTC 5 cut(s) 881, 1004, 1549, 1820, 1908
Tru1I TTAA 2 cut(s) 438, 489
Tru9I TTAA 2 cut(s) 438, 489
TscAI CASTG 1 cut(s) 525
TseFI GTSAC 2 cut(s) 830, 1531
TseI GCWGC 6 cut(s) 528, 695, 698, 709, 752, 1937
Tsp45I GTSAC 2 cut(s) 830, 1531
TspGWI ACGGA 2 cut(s) 920, 1724
TspRI CASTG 1 cut(s) 525
Van91I CCANNNNNTGG 2 cut(s) 577, 631
VpaK11BI GGWCC 3 cut(s) 1289, 1826, 1944
XagI CCTNNNNNAGG 1 cut(s) 614
XapI RAATTY 3 cut(s) 191, 732, 1601
XceI RCATGY 1 cut(s) 445
XhoI CTCGAG 1 cut(s) 479
XmiI GTMKAC 3 cut(s) 229, 942, 1140
XmnI GAANNNNTTC 1 cut(s) 104
Zsp2I ATGCAT 1 cut(s) 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.