Rmu_sc0004277.1_g000078

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004277.1
OG0000060
Physical Location & Seq
Reverse (-)
277781 .. 279640
1860 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004277.1_g000078.1.cds

Sequence Viewer

Length: 1509 bp
atgaggcatttcgaccgcacggaaaagaagttcaagtttggtgatgttgttacagaaataacagaagaagacatcacatctttgtttcaccttcctgcagaaggagatgtattcaacgttaacaagagggttgccagggatgaaatggaagactctacaatatttggcagcccttcgaaaaagcaagctgtcctaagaacggaggttgaaaataaactcataaccgagttgacaaagccggtaaaacagaaagacgcaagaaagattgcagtgttgatgatcgcatatctattcagcacattcttcttcagccgaaccgggactcagattacttgggacatggtggcagtttgtgaacgaattgaggcaataaacatgtacaattggccaaggctcattctcgacttcttattggaaaggctgcagaagtacaggagaaacagtccagcgaccatgaacggatgcctgcttctcatttactactggttccttgagaagaccaaggcaaagaactacattccggggaagcacaaggaaactccaagatttgtgcgatggttgataaaagaaatattcaacttggagcagctttacaagaatgagaacttggctgtggatctaataaaagctggaccgtggtctgcggatcttggactggatgacctcgaggtcgatgatgacgagcaggacactccgagctttaacaactgggagcccgaggcaagccaagcagaagaggagcaaaatgaaaggcttacagggaacgtgaaagaacttatcagtgagatagaggcagccatggggaacaagaatcccaccaaagaaatggcggcaaagctaagaaggcttgccgaagcaattgaacacctgaatgcacagaccagggatctattgtccaaggaaaggaggtcaaaaaataacctcatcagggctctctacatcaggctcggaaaggaaaagggagagctccatccacaagaaagtcagcttcagatagtttcattaccatccaaagtgccacaagatgaggttgaggaagcagccccctactttggagaaagtgtgggagaggaaccacattatacagcaaatgtgggacatgacacggaggaggtgatatcagcatgtcctctctctatggaaatacctgaacaagaggaagaaagccgagaacaacctcaacaacccgaaagtgggaatcaaggagaggaagaacatctcgacagcattaatgtgaagacatacaaccgggctgccaagaaggctaaagaagaggaatgggagtacgacactcccgaagaagtaaagatgaggaagagagcaccacctaagagagctacaaacatgccgcaaacacagaaaacagtggagaacaagataaaaatcaaaggtgtcaactgcgaaaagccaacttggaggacactgaaccccacagttgcaaagcacttgcaagacttcttcagagttgcagcaccgatctattgcaccagatcaccaagcatgacctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

502

Amino Acids

58.04

Weight (kDa)

5.48

Isoelectric Point (pI)

56.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 668
AbsI CCTCGAGG 1 cut(s) 665
AciI CCGC 4 cut(s) 16, 644, 830, 1349
AclI AACGTT 1 cut(s) 117
AclWI GGATC 3 cut(s) 624, 654, 894
AcoI YGGCCR 1 cut(s) 386
AcuI CTGAAG 3 cut(s) 292, 974, 1444
AfaI GTAC 3 cut(s) 380, 431, 1286
AfiI CCNNNNNNNGG 7 cut(s) 101, 199, 903, 928, 1052, 1193, 1194
AflIII ACRYGT 1 cut(s) 375
AgsI TTSAA 5 cut(s) 34, 115, 209, 577, 863
AjnI CCWGG 2 cut(s) 134, 881
AjuI GAANNNNNNNTTGG 2 cut(s) 590, 622
AloI GAACNNNNNNTCC 2 cut(s) 14, 46
AluBI AGCT 8 cut(s) 188, 589, 629, 699, 838, 967, 988, 1337
AluI AGCT 8 cut(s) 188, 589, 629, 699, 838, 967, 988, 1337
Alw21I GWGCWC 2 cut(s) 969, 1324
AlwI GGATC 3 cut(s) 624, 654, 894
Ama87I CYCGRG 2 cut(s) 665, 716
AoxI GGCC 1 cut(s) 386
ApeKI GCWGC 7 cut(s) 168, 421, 586, 794, 1040, 1253, 1469
AseI ATTAAT 1 cut(s) 1230
AspS9I GGNCC 1 cut(s) 632
AsuC2I CCSGG 3 cut(s) 319, 522, 1250
AsuHPI GGTGA 4 cut(s) 53, 80, 1126, 1485
AsuII TTCGAA 1 cut(s) 176
AvaI CYCGRG 2 cut(s) 665, 716
AvaII GGWCC 1 cut(s) 632
BalI TGGCCA 1 cut(s) 388
BanII GRGCYC 3 cut(s) 717, 934, 969
BbsI GAAGAC 4 cut(s) 75, 156, 503, 1244
Bbv12I GWGCWC 2 cut(s) 969, 1324
BbvI GCAGC 7 cut(s) 180, 408, 598, 806, 1052, 1240, 1481
BccI CCATC 3 cut(s) 549, 978, 1015
BciT130I CCWGG 2 cut(s) 136, 883
BcnI CCSGG 3 cut(s) 319, 522, 1250
BfmI CTRYAG 2 cut(s) 96, 422
BglI GCCNNNNNGGC 1 cut(s) 1262
BisI GCNGC 9 cut(s) 169, 422, 587, 795, 831, 1041, 1254, 1349, 1470
BlsI GCNGC 9 cut(s) 170, 423, 588, 796, 832, 1042, 1255, 1350, 1471
Bme1390I CCNGG 5 cut(s) 136, 319, 522, 883, 1250
Bme18I GGWCC 1 cut(s) 632
BmeT110I CYCGRG 2 cut(s) 665, 716
BmgT120I GGNCC 1 cut(s) 632
BmiI GGNNCC 3 cut(s) 488, 714, 1074
BmrFI CCNGG 5 cut(s) 136, 319, 522, 883, 1250
BmrI ACTGGG 1 cut(s) 718
BmsI GCATC 1 cut(s) 452
BmuI ACTGGG 1 cut(s) 718
BoxI GACNNNNGTC 1 cut(s) 637
BpiI GAAGAC 4 cut(s) 75, 156, 503, 1244
Bpu14I TTCGAA 1 cut(s) 176
BpuEI CTTGAG 1 cut(s) 512
BpuMI CCSGG 3 cut(s) 319, 522, 1250
BsaBI GATNNNNATC 1 cut(s) 1382
BsaJI CCNNGG 9 cut(s) 135, 389, 501, 521, 635, 717, 798, 882, 897
BsaXI ACNNNNNCTCC 4 cut(s) 427, 457, 1047, 1077
Bsc4I CCNNNNNNNGG 7 cut(s) 101, 199, 903, 928, 1052, 1193, 1194
Bse118I RCCGGY 1 cut(s) 238
Bse1I ACTGG 3 cut(s) 488, 660, 713
Bse8I GATNNNNATC 1 cut(s) 1382
BseBI CCWGG 2 cut(s) 136, 883
BseDI CCNNGG 9 cut(s) 135, 389, 501, 521, 635, 717, 798, 882, 897
BseGI GGATG 5 cut(s) 145, 467, 664, 970, 1007
BseJI GATNNNNATC 1 cut(s) 1382
BseLI CCNNNNNNNGG 7 cut(s) 101, 199, 903, 928, 1052, 1193, 1194
BseMII CTCAG 1 cut(s) 338
BseNI ACTGG 3 cut(s) 488, 660, 713
BseRI GAGGAG 2 cut(s) 752, 1124
BseXI GCAGC 7 cut(s) 180, 408, 598, 806, 1052, 1240, 1481
Bsh1285I CGRYCG 1 cut(s) 16
BshFI GGCC 1 cut(s) 388
BsiEI CGRYCG 1 cut(s) 16
BsiHKAI GWGCWC 2 cut(s) 969, 1324
BsiHKCI CYCGRG 2 cut(s) 665, 716
BsiSI CCGG 4 cut(s) 239, 318, 521, 1249
BslFI GGGAC 3 cut(s) 334, 350, 1110
BslI CCNNNNNNNGG 7 cut(s) 101, 199, 903, 928, 1052, 1193, 1194
BsmFI GGGAC 3 cut(s) 334, 350, 1110
BsmI GAATGC 1 cut(s) 877
BsnI GGCC 1 cut(s) 388
BsoBI CYCGRG 2 cut(s) 665, 716
Bsp119I TTCGAA 1 cut(s) 176
Bsp1286I GDGCHC 4 cut(s) 717, 934, 969, 1324
Bsp1407I TGTACA 1 cut(s) 378
Bsp143I GATC 6 cut(s) 279, 616, 646, 886, 1476, 1490
Bsp19I CCATGG 1 cut(s) 798
BspACI CCGC 4 cut(s) 16, 644, 830, 1349
BspANI GGCC 1 cut(s) 388
BspCNI CTCAG 1 cut(s) 337
BspLI GGNNCC 3 cut(s) 488, 714, 1074
BspMAI CTGCAG 2 cut(s) 100, 426
BspPI GGATC 3 cut(s) 624, 654, 894
BspT104I TTCGAA 1 cut(s) 176
BsrFI RCCGGY 1 cut(s) 238
BsrGI TGTACA 1 cut(s) 378
BsrI ACTGG 3 cut(s) 488, 660, 713
BssAI RCCGGY 1 cut(s) 238
BssECI CCNNGG 9 cut(s) 135, 389, 501, 521, 635, 717, 798, 882, 897
BssMI GATC 6 cut(s) 279, 616, 646, 886, 1476, 1490
BssT1I CCWWGG 4 cut(s) 389, 501, 798, 897
Bst2UI CCWGG 2 cut(s) 136, 883
Bst4CI ACNGT 4 cut(s) 443, 636, 1366, 1435
Bst6I CTCTTC 3 cut(s) 729, 1266, 1310
BstAUI TGTACA 1 cut(s) 378
BstBI TTCGAA 1 cut(s) 176
BstC8I GCNNGC 4 cut(s) 186, 467, 724, 849
BstDEI CTNAG 4 cut(s) 194, 324, 839, 1329
BstDSI CCRYGG 2 cut(s) 635, 798
BstENI CCTNNNNNAGG 1 cut(s) 99
BstF5I GGATG 5 cut(s) 145, 467, 664, 970, 1007
BstKTI GATC 6 cut(s) 282, 619, 649, 889, 1479, 1493
BstMBI GATC 6 cut(s) 279, 616, 646, 886, 1476, 1490
BstMCI CGRYCG 1 cut(s) 16
BstMWI GCNNNNNNNGC 3 cut(s) 728, 844, 1262
BstNI CCWGG 2 cut(s) 136, 883
BstNSI RCATGY 3 cut(s) 379, 1128, 1348
BstPAI GACNNNNGTC 1 cut(s) 637
BstSCI CCNGG 5 cut(s) 134, 317, 520, 881, 1248
BstSFI CTRYAG 2 cut(s) 96, 422
BstV1I GCAGC 7 cut(s) 180, 408, 598, 806, 1052, 1240, 1481
BstV2I GAAGAC 4 cut(s) 75, 156, 503, 1244
BstX2I RGATCY 3 cut(s) 616, 646, 886
BstXI CCANNNNNNTGG 1 cut(s) 826
BstYI RGATCY 3 cut(s) 616, 646, 886
BsuRI GGCC 1 cut(s) 388
BtgI CCRYGG 2 cut(s) 635, 798
BtgZI GCGATG 1 cut(s) 568
BtsCI GGATG 5 cut(s) 145, 467, 664, 970, 1007
BtsI GCAGTG 1 cut(s) 276
BtsIMutI CAGTG 4 cut(s) 276, 787, 1371, 1421
Cac8I GCNNGC 4 cut(s) 186, 467, 724, 849
Cfr10I RCCGGY 1 cut(s) 238
Cfr13I GGNCC 1 cut(s) 632
CseI GACGC 1 cut(s) 263
Csp6I GTAC 3 cut(s) 379, 430, 1285
CviAII CATG 8 cut(s) 340, 376, 454, 799, 1100, 1125, 1345, 1501
CviQI GTAC 3 cut(s) 379, 430, 1285
DdeI CTNAG 4 cut(s) 194, 324, 839, 1329
DpnI GATC 6 cut(s) 281, 618, 648, 888, 1478, 1492
DpnII GATC 6 cut(s) 279, 616, 646, 886, 1476, 1490
DrdI GACNNNNNNGTC 1 cut(s) 668
DseDI GACNNNNNNGTC 1 cut(s) 668
EaeI YGGCCR 1 cut(s) 386
Eam1104I CTCTTC 3 cut(s) 729, 1266, 1310
EarI CTCTTC 3 cut(s) 729, 1266, 1310
Ecl136II GAGCTC 1 cut(s) 967
Eco130I CCWWGG 4 cut(s) 389, 501, 798, 897
Eco24I GRGCYC 3 cut(s) 717, 934, 969
Eco32I GATATC 1 cut(s) 1119
Eco47I GGWCC 1 cut(s) 632
Eco53kI GAGCTC 1 cut(s) 967
Eco57I CTGAAG 3 cut(s) 292, 974, 1444
Eco88I CYCGRG 2 cut(s) 665, 716
EcoICRI GAGCTC 1 cut(s) 967
EcoNI CCTNNNNNAGG 1 cut(s) 99
EcoRII CCWGG 2 cut(s) 134, 881
EcoRV GATATC 1 cut(s) 1119
EcoT14I CCWWGG 4 cut(s) 389, 501, 798, 897
EcoT38I GRGCYC 3 cut(s) 717, 934, 969
ErhI CCWWGG 4 cut(s) 389, 501, 798, 897
FaeI CATG 8 cut(s) 343, 379, 457, 802, 1103, 1128, 1348, 1504
FaqI GGGAC 3 cut(s) 334, 350, 1110
FatI CATG 8 cut(s) 339, 375, 453, 798, 1099, 1124, 1344, 1500
Fnu4HI GCNGC 9 cut(s) 169, 422, 587, 795, 831, 1041, 1254, 1349, 1470
FokI GGATG 5 cut(s) 152, 474, 671, 957, 994
FriOI GRGCYC 3 cut(s) 717, 934, 969
Fsp4HI GCNGC 9 cut(s) 169, 422, 587, 795, 831, 1041, 1254, 1349, 1470
GluI GCNGC 9 cut(s) 169, 422, 587, 795, 831, 1041, 1254, 1349, 1470
HaeIII GGCC 1 cut(s) 388
HapII CCGG 4 cut(s) 239, 318, 521, 1249
HgaI GACGC 1 cut(s) 263
Hin1II CATG 8 cut(s) 343, 379, 457, 802, 1103, 1128, 1348, 1504
HincII GTYRAC 3 cut(s) 121, 231, 1396
HindII GTYRAC 3 cut(s) 121, 231, 1396
HinfI GANTC 4 cut(s) 152, 322, 811, 1198
HpaI GTTAAC 1 cut(s) 121
HpaII CCGG 4 cut(s) 239, 318, 521, 1249
HphI GGTGA 4 cut(s) 53, 80, 1126, 1485
Hpy166II GTNNAC 4 cut(s) 121, 231, 356, 1396
Hpy188I TCNGA 5 cut(s) 327, 696, 950, 993, 1463
Hpy188III TCNNGA 3 cut(s) 401, 1220, 1295
Hpy8I GTNNAC 4 cut(s) 121, 231, 356, 1396
HpyAV CCTTC 5 cut(s) 95, 101, 183, 837, 1255
HpyCH4III ACNGT 4 cut(s) 443, 636, 1366, 1435
HpyCH4IV ACGT 2 cut(s) 117, 765
HpyCH4V TGCA 8 cut(s) 98, 269, 424, 875, 1439, 1450, 1469, 1485
HpyF10VI GCNNNNNNNGC 3 cut(s) 728, 844, 1262
HpyF3I CTNAG 4 cut(s) 194, 324, 839, 1329
HpySE526I ACGT 2 cut(s) 117, 765
Hsp92II CATG 8 cut(s) 343, 379, 457, 802, 1103, 1128, 1348, 1504
KspAI GTTAAC 1 cut(s) 121
Kzo9I GATC 6 cut(s) 279, 616, 646, 886, 1476, 1490
LmnI GCTCC 4 cut(s) 583, 712, 739, 972
Lsp1109I GCAGC 7 cut(s) 180, 408, 598, 806, 1052, 1240, 1481
LweI GCATC 1 cut(s) 452
MaeII ACGT 2 cut(s) 117, 765
MaeIII GTNAC 1 cut(s) 49
MalI GATC 6 cut(s) 281, 618, 648, 888, 1478, 1492
MboI GATC 6 cut(s) 279, 616, 646, 886, 1476, 1490
MfeI CAATTG 2 cut(s) 382, 858
MflI RGATCY 3 cut(s) 616, 646, 886
MhlI GDGCHC 4 cut(s) 717, 934, 969, 1324
MlsI TGGCCA 1 cut(s) 388
MluCI AATT 3 cut(s) 360, 382, 858
MluNI TGGCCA 1 cut(s) 388
MlyI GAGTC 2 cut(s) 146, 316
Mox20I TGGCCA 1 cut(s) 388
MscI TGGCCA 1 cut(s) 388
MseI TTAA 3 cut(s) 120, 702, 1230
MslI CAYNNNNRTG 2 cut(s) 870, 1232
Msp20I TGGCCA 1 cut(s) 388
MspI CCGG 4 cut(s) 239, 318, 521, 1249
MspR9I CCNGG 5 cut(s) 136, 319, 522, 883, 1250
MunI CAATTG 2 cut(s) 382, 858
Mva1269I GAATGC 1 cut(s) 877
MvaI CCWGG 2 cut(s) 136, 883
MwoI GCNNNNNNNGC 3 cut(s) 728, 844, 1262
NciI CCSGG 3 cut(s) 319, 522, 1250
NcoI CCATGG 1 cut(s) 798
NdeII GATC 6 cut(s) 279, 616, 646, 886, 1476, 1490
NlaIII CATG 8 cut(s) 343, 379, 457, 802, 1103, 1128, 1348, 1504
NlaIV GGNNCC 3 cut(s) 488, 714, 1074
NmeAIII GCCGAG 1 cut(s) 1193
NspI RCATGY 3 cut(s) 379, 1128, 1348
NspV TTCGAA 1 cut(s) 176
PaeR7I CTCGAG 1 cut(s) 665
PciI ACATGT 1 cut(s) 375
PcsI WCGNNNNNNNCGW 2 cut(s) 678, 1293
PctI GAATGC 1 cut(s) 877
PfeI GAWTC 2 cut(s) 811, 1198
PkrI GCNGC 9 cut(s) 170, 423, 588, 796, 832, 1042, 1255, 1350, 1471
PleI GAGTC 2 cut(s) 146, 316
PpsI GAGTC 2 cut(s) 146, 316
PscI ACATGT 1 cut(s) 375
PshAI GACNNNNGTC 1 cut(s) 637
PshBI ATTAAT 1 cut(s) 1230
Psp124BI GAGCTC 1 cut(s) 969
Psp1406I AACGTT 1 cut(s) 117
Psp6I CCWGG 2 cut(s) 134, 881
PspGI CCWGG 2 cut(s) 134, 881
PspN4I GGNNCC 3 cut(s) 488, 714, 1074
PspPI GGNCC 1 cut(s) 632
PspXI VCTCGAGB 1 cut(s) 665
PstI CTGCAG 2 cut(s) 100, 426
PsuI RGATCY 3 cut(s) 616, 646, 886
RsaI GTAC 3 cut(s) 380, 431, 1286
RsaNI GTAC 3 cut(s) 379, 430, 1285
RseI CAYNNNNRTG 2 cut(s) 870, 1232
SacI GAGCTC 1 cut(s) 969
SaqAI TTAA 3 cut(s) 120, 702, 1230
SatI GCNGC 9 cut(s) 169, 422, 587, 795, 831, 1041, 1254, 1349, 1470
Sau3AI GATC 6 cut(s) 279, 616, 646, 886, 1476, 1490
Sau96I GGNCC 1 cut(s) 632
SchI GAGTC 2 cut(s) 146, 316
ScrFI CCNGG 5 cut(s) 136, 319, 522, 883, 1250
SduI GDGCHC 4 cut(s) 717, 934, 969, 1324
SfaNI GCATC 1 cut(s) 452
SfcI CTRYAG 2 cut(s) 96, 422
Sfr274I CTCGAG 1 cut(s) 665
SfuI TTCGAA 1 cut(s) 176
SinI GGWCC 1 cut(s) 632
SlaI CTCGAG 1 cut(s) 665
SmiMI CAYNNNNRTG 2 cut(s) 870, 1232
SmlI CTYRAG 2 cut(s) 491, 665
SmoI CTYRAG 2 cut(s) 491, 665
Sse9I AATT 3 cut(s) 360, 382, 858
SsiI CCGC 4 cut(s) 16, 644, 830, 1349
SspI AATATT 2 cut(s) 162, 573
SstI GAGCTC 1 cut(s) 969
StyD4I CCNGG 5 cut(s) 134, 317, 520, 881, 1248
StyI CCWWGG 4 cut(s) 389, 501, 798, 897
TaaI ACNGT 4 cut(s) 443, 636, 1366, 1435
TaiI ACGT 2 cut(s) 120, 768
TaqI TCGA 6 cut(s) 12, 176, 402, 666, 672, 1221
TasI AATT 3 cut(s) 360, 382, 858
TatI WGTACW 2 cut(s) 378, 429
TauI GCSGC 2 cut(s) 833, 1351
TfiI GAWTC 2 cut(s) 811, 1198
Tru1I TTAA 3 cut(s) 120, 702, 1230
Tru9I TTAA 3 cut(s) 120, 702, 1230
TscAI CASTG 4 cut(s) 276, 787, 1371, 1428
TseI GCWGC 7 cut(s) 168, 421, 586, 794, 1040, 1253, 1469
TspDTI ATGAA 4 cut(s) 156, 470, 762, 990
TspGWI ACGGA 4 cut(s) 35, 215, 474, 1121
TspRI CASTG 4 cut(s) 276, 787, 1371, 1428
VpaK11BI GGWCC 1 cut(s) 632
VspI ATTAAT 1 cut(s) 1230
XagI CCTNNNNNAGG 1 cut(s) 99
XceI RCATGY 3 cut(s) 379, 1128, 1348
XcmI CCANNNNNNNNNTGG 2 cut(s) 142, 823
XhoI CTCGAG 1 cut(s) 665
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.