nuA4 complex subunit EAF3 homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 362 |
| AclWI | GGATC | 2 cut(s) | 146, 242 |
| AcsI | RAATTY | 3 cut(s) | 14, 83, 525 |
| AcuI | CTGAAG | 1 cut(s) | 485 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 226, 382 |
| AgsI | TTSAA | 5 cut(s) | 101, 190, 323, 373, 380 |
| AjnI | CCWGG | 1 cut(s) | 30 |
| AluBI | AGCT | 4 cut(s) | 175, 309, 424, 535 |
| AluI | AGCT | 4 cut(s) | 175, 309, 424, 535 |
| AlwI | GGATC | 2 cut(s) | 146, 242 |
| ApeKI | GCWGC | 2 cut(s) | 309, 312 |
| ApoI | RAATTY | 3 cut(s) | 14, 83, 525 |
| AspS9I | GGNCC | 2 cut(s) | 34, 70 |
| AsuHPI | GGTGA | 2 cut(s) | 77, 338 |
| AvaII | GGWCC | 2 cut(s) | 34, 70 |
| BanI | GGYRCC | 1 cut(s) | 362 |
| BanII | GRGCYC | 1 cut(s) | 232 |
| BbsI | GAAGAC | 2 cut(s) | 189, 348 |
| BbvI | GCAGC | 2 cut(s) | 296, 299 |
| BceAI | ACGGC | 1 cut(s) | 204 |
| BciT130I | CCWGG | 1 cut(s) | 32 |
| BfaI | CTAG | 2 cut(s) | 240, 476 |
| BisI | GCNGC | 2 cut(s) | 310, 313 |
| BlsI | GCNGC | 2 cut(s) | 311, 314 |
| Bme1390I | CCNGG | 1 cut(s) | 32 |
| Bme18I | GGWCC | 2 cut(s) | 34, 70 |
| BmgT120I | GGNCC | 2 cut(s) | 34, 70 |
| BmiI | GGNNCC | 2 cut(s) | 72, 364 |
| BmrFI | CCNGG | 1 cut(s) | 32 |
| BpiI | GAAGAC | 2 cut(s) | 189, 348 |
| BsaJI | CCNNGG | 1 cut(s) | 252 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 226, 382 |
| Bse118I | RCCGGY | 1 cut(s) | 365 |
| Bse3DI | GCAATG | 1 cut(s) | 292 |
| BseBI | CCWGG | 1 cut(s) | 32 |
| BseDI | CCNNGG | 1 cut(s) | 252 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 226, 382 |
| BseMI | GCAATG | 1 cut(s) | 292 |
| BseMII | CTCAG | 2 cut(s) | 84, 245 |
| BseRI | GAGGAG | 1 cut(s) | 258 |
| BseXI | GCAGC | 2 cut(s) | 296, 299 |
| BshNI | GGYRCC | 1 cut(s) | 362 |
| BsiSI | CCGG | 1 cut(s) | 366 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 226, 382 |
| Bsp1286I | GDGCHC | 1 cut(s) | 232 |
| Bsp143I | GATC | 3 cut(s) | 138, 247, 485 |
| Bsp19I | CCATGG | 1 cut(s) | 252 |
| BspCNI | CTCAG | 2 cut(s) | 85, 244 |
| BspLI | GGNNCC | 2 cut(s) | 72, 364 |
| BspPI | GGATC | 2 cut(s) | 146, 242 |
| BspT107I | GGYRCC | 1 cut(s) | 362 |
| BsrDI | GCAATG | 1 cut(s) | 292 |
| BsrFI | RCCGGY | 1 cut(s) | 365 |
| BssAI | RCCGGY | 1 cut(s) | 365 |
| BssECI | CCNNGG | 1 cut(s) | 252 |
| BssMI | GATC | 3 cut(s) | 138, 247, 485 |
| BssT1I | CCWWGG | 1 cut(s) | 252 |
| Bst2UI | CCWGG | 1 cut(s) | 32 |
| Bst6I | CTCTTC | 1 cut(s) | 109 |
| BstC8I | GCNNGC | 1 cut(s) | 367 |
| BstDEI | CTNAG | 2 cut(s) | 93, 231 |
| BstDSI | CCRYGG | 1 cut(s) | 252 |
| BstKTI | GATC | 3 cut(s) | 141, 250, 488 |
| BstMBI | GATC | 3 cut(s) | 138, 247, 485 |
| BstNI | CCWGG | 1 cut(s) | 32 |
| BstSCI | CCNGG | 1 cut(s) | 30 |
| BstV1I | GCAGC | 2 cut(s) | 296, 299 |
| BstV2I | GAAGAC | 2 cut(s) | 189, 348 |
| BstX2I | RGATCY | 2 cut(s) | 138, 247 |
| BstYI | RGATCY | 2 cut(s) | 138, 247 |
| BtgI | CCRYGG | 1 cut(s) | 252 |
| BtsI | GCAGTG | 1 cut(s) | 280 |
| BtsIMutI | CAGTG | 3 cut(s) | 21, 90, 280 |
| Cac8I | GCNNGC | 1 cut(s) | 367 |
| Cfr10I | RCCGGY | 1 cut(s) | 365 |
| Cfr13I | GGNCC | 2 cut(s) | 34, 70 |
| CviAII | CATG | 1 cut(s) | 253 |
| CviJI | RGCY | 9 cut(s) | 8, 30, 175, 230, 309, 331, 369, 424, 535 |
| CviKI_1 | RGCY | 9 cut(s) | 8, 30, 175, 230, 309, 331, 369, 424, 535 |
| DdeI | CTNAG | 2 cut(s) | 93, 231 |
| DpnI | GATC | 3 cut(s) | 140, 249, 487 |
| DpnII | GATC | 3 cut(s) | 138, 247, 485 |
| Eam1104I | CTCTTC | 1 cut(s) | 109 |
| EarI | CTCTTC | 1 cut(s) | 109 |
| Eco130I | CCWWGG | 1 cut(s) | 252 |
| Eco24I | GRGCYC | 1 cut(s) | 232 |
| Eco47I | GGWCC | 2 cut(s) | 34, 70 |
| Eco57I | CTGAAG | 1 cut(s) | 485 |
| EcoO109I | RGGNCCY | 1 cut(s) | 70 |
| EcoRII | CCWGG | 1 cut(s) | 30 |
| EcoT14I | CCWWGG | 1 cut(s) | 252 |
| EcoT38I | GRGCYC | 1 cut(s) | 232 |
| ErhI | CCWWGG | 1 cut(s) | 252 |
| FaeI | CATG | 1 cut(s) | 256 |
| FaiI | YATR | 4 cut(s) | 153, 254, 264, 461 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 395, 427 |
| FatI | CATG | 1 cut(s) | 252 |
| Fnu4HI | GCNGC | 2 cut(s) | 310, 313 |
| FriOI | GRGCYC | 1 cut(s) | 232 |
| Fsp4HI | GCNGC | 2 cut(s) | 310, 313 |
| FspBI | CTAG | 2 cut(s) | 240, 476 |
| GluI | GCNGC | 2 cut(s) | 310, 313 |
| HapII | CCGG | 1 cut(s) | 366 |
| Hin1II | CATG | 1 cut(s) | 256 |
| HindIII | AAGCTT | 1 cut(s) | 422 |
| HinfI | GANTC | 1 cut(s) | 257 |
| HpaII | CCGG | 1 cut(s) | 366 |
| HphI | GGTGA | 2 cut(s) | 77, 338 |
| Hpy166II | GTNNAC | 1 cut(s) | 280 |
| Hpy188I | TCNGA | 2 cut(s) | 131, 234 |
| Hpy188III | TCNNGA | 2 cut(s) | 349, 476 |
| Hpy8I | GTNNAC | 1 cut(s) | 280 |
| HpyAV | CCTTC | 3 cut(s) | 126, 317, 386 |
| HpyCH4V | TGCA | 2 cut(s) | 285, 505 |
| HpyF3I | CTNAG | 2 cut(s) | 93, 231 |
| Hsp92II | CATG | 1 cut(s) | 256 |
| KroI | GCCGGC | 1 cut(s) | 365 |
| KroNI | GCCGGC | 1 cut(s) | 367 |
| Kzo9I | GATC | 3 cut(s) | 138, 247, 485 |
| LpnPI | CCDG | 7 cut(s) | 17, 22, 44, 96, 149, 375, 379 |
| Lsp1109I | GCAGC | 2 cut(s) | 296, 299 |
| MaeI | CTAG | 2 cut(s) | 240, 476 |
| MalI | GATC | 3 cut(s) | 140, 249, 487 |
| MboI | GATC | 3 cut(s) | 138, 247, 485 |
| MboII | GAAGA | 5 cut(s) | 113, 126, 194, 353, 478 |
| MflI | RGATCY | 2 cut(s) | 138, 247 |
| MhlI | GDGCHC | 1 cut(s) | 232 |
| MluCI | AATT | 4 cut(s) | 14, 83, 516, 525 |
| MlyI | GAGTC | 1 cut(s) | 266 |
| MnlI | CCTC | 7 cut(s) | 61, 88, 118, 207, 220, 236, 293 |
| MroNI | GCCGGC | 1 cut(s) | 365 |
| MseI | TTAA | 3 cut(s) | 291, 420, 429 |
| MslI | CAYNNNNRTG | 1 cut(s) | 285 |
| MspA1I | CMGCKG | 1 cut(s) | 535 |
| MspI | CCGG | 1 cut(s) | 366 |
| MspR9I | CCNGG | 1 cut(s) | 32 |
| MvaI | CCWGG | 1 cut(s) | 32 |
| NaeI | GCCGGC | 1 cut(s) | 367 |
| NcoI | CCATGG | 1 cut(s) | 252 |
| NdeII | GATC | 3 cut(s) | 138, 247, 485 |
| NgoMIV | GCCGGC | 1 cut(s) | 365 |
| NlaIII | CATG | 1 cut(s) | 256 |
| NlaIV | GGNNCC | 2 cut(s) | 72, 364 |
| PdiI | GCCGGC | 1 cut(s) | 367 |
| PflFI | GACNNNGTC | 1 cut(s) | 413 |
| PkrI | GCNGC | 2 cut(s) | 311, 314 |
| PleI | GAGTC | 1 cut(s) | 265 |
| PpsI | GAGTC | 1 cut(s) | 265 |
| PpuMI | RGGWCCY | 1 cut(s) | 70 |
| Psp5II | RGGWCCY | 1 cut(s) | 70 |
| Psp6I | CCWGG | 1 cut(s) | 30 |
| PspGI | CCWGG | 1 cut(s) | 30 |
| PspN4I | GGNNCC | 2 cut(s) | 72, 364 |
| PspPI | GGNCC | 2 cut(s) | 34, 70 |
| PspPPI | RGGWCCY | 1 cut(s) | 70 |
| PsuI | RGATCY | 2 cut(s) | 138, 247 |
| PsyI | GACNNNGTC | 1 cut(s) | 413 |
| PvuII | CAGCTG | 1 cut(s) | 535 |
| RseI | CAYNNNNRTG | 1 cut(s) | 285 |
| SaqAI | TTAA | 3 cut(s) | 291, 420, 429 |
| SatI | GCNGC | 2 cut(s) | 310, 313 |
| Sau3AI | GATC | 3 cut(s) | 138, 247, 485 |
| Sau96I | GGNCC | 2 cut(s) | 34, 70 |
| SchI | GAGTC | 1 cut(s) | 266 |
| ScrFI | CCNGG | 1 cut(s) | 32 |
| SduI | GDGCHC | 1 cut(s) | 232 |
| SinI | GGWCC | 2 cut(s) | 34, 70 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 285 |
| Sse9I | AATT | 4 cut(s) | 14, 83, 516, 525 |
| SspMI | CTAG | 2 cut(s) | 240, 476 |
| StyD4I | CCNGG | 1 cut(s) | 30 |
| StyI | CCWWGG | 1 cut(s) | 252 |
| TasI | AATT | 4 cut(s) | 14, 83, 516, 525 |
| Tru1I | TTAA | 3 cut(s) | 291, 420, 429 |
| Tru9I | TTAA | 3 cut(s) | 291, 420, 429 |
| TscAI | CASTG | 3 cut(s) | 28, 97, 287 |
| TseI | GCWGC | 2 cut(s) | 309, 312 |
| TspRI | CASTG | 3 cut(s) | 28, 97, 287 |
| Tth111I | GACNNNGTC | 1 cut(s) | 413 |
| VpaK11BI | GGWCC | 2 cut(s) | 34, 70 |
| XapI | RAATTY | 3 cut(s) | 14, 83, 525 |
| XbaI | TCTAGA | 1 cut(s) | 475 |
| XspI | CTAG | 2 cut(s) | 240, 476 |