FvH4_4g15920

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000060
Physical Location & Seq
Forward (+)
19861888 .. 19866038
4151 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g15920.t1

Sequence Viewer

Length: 1842 bp
ATGAATAGATACAAGGAGAGCATCCCAGAAGAATCATGGGAGTTGATAAACAGCACTTGTTTTCGGGGGATAATTGAAGCATTTAGATTGGGCAAGGTTGAGGAGGATCAAGTGAAGAAGCTTGAATCTAATTTTGAGATCCTAATGAGGCACTACAATAGTGACAATAAAAACTTCATATTTGGGAATAGGGAGATTAAAATTACGGAGCATGATGTTCATTCAATTTTTGGAATAACCAAAGAAGGCTCGGATGTGGATATCACAATAGACCAGAAATACTGCAAGGGCAGTAAGAAGAATTTGGTAGATTCTACTGTCTTTGGAAAGCAAACAAGAAGAACAATCACCAGAAGGGTTATTGATGACACATTAATGGAAGAGCTTAGGAAGATTCATAAAAAGAAGGGGGATCCAAGGAAGATAGCCTCTTTGCAGAAGCGGGAACACATTGAATGGAAACTGATACTCAAGTGTGAAGACCTTGAAGGCATCGACAAATACAACTGGTCACATAAGATATTAGAATTCTTGCACCAAGGACTTCACAAGCACGTAAGGGGGGAGCCAAGAGTTTTGAATGGATGCCTCCTTCTGGTTCTATACTGGTTCCTTGAGAAAACAAAAATAAAGAAGCGGATTATCGGGAAAGAGAAGGAGACTCCCAGATTTATAAGATGGTCAATACAAGAGATCATCAAAGAAAAGGAGTATTTGAGAAGAACTGAATTGCTAGAGGAACTCATAATAGAAGGTCCATGGATGGACGAGGAGGAAACGAGTTCCGGTAATGTTGAGCAGCAGCAAGATGACAATAGAACACCAAGGACAATTGATTGGGAGCTGTCAATGGAAGATATGAAGAAGAAGCTTACAGAACTTGCCAAAGCAAATGAAGAACTGGAGAAGGAGGAGGAGGATAGGTCAAAGCCGGTTGAAGAGGAAGAATATAAGTGCAGAGAAGAGCAACCAGGAACTGAAGAGTTTTTTGAACAAGTAGCAGAACCAGTTCCGTTGCGAAAGATATTTCCAGAAGACGATGAACCTGTGACGATCGATCAAGCAGGAGGGCTCAAGAAACATGTCAAGCAGAAGGGCTCAAAACAAACTGTGGAGACTGGTTCGATTGAAAGAAATGTCAACCTGAAAAAACGTGGGGCACAAAAGAGGATAGAAGAAGAATGGGAGTATGACACCCCTAAAGGGCTAAAGCCAGCAAAAAGAACAAAGAAGGTGGAGCATAAAGTCCAAAATCGTATTGTTATTGATGGAGTGAACTGCAACACTGATACATGGAAGCTCTTGGATGAAAAGGTGGTGAATCACTATAAGAACTGGTTTGATTTGAACAAGGATGAGAATGATGAGGTGTACCTCGCAATGTTGAAGGAGGAAATGGAAAAGAAGAAGGTCTCAGTCGGATTCCTAGACATAGAGGCAGCGGTGAATCACATTATGGTGTTCATCAAACGCGTATATGATTCCACCAAATACCCTCTCAGCCAAGGCTTGGACCCTGAGGAATGGAGGGAAAACTATGACAAGCAGGACAGCCAAGGAATAGTGGTTGACGGTTACTTGATGATAAGTGCTGAAGAGAGAAGAACAAGAAGATGGATGCTGGACCAAAACGTTTATCAAGCAAGATACAAGCTGAAGGATATCTTATCCTGCCTGCAGCAAAAGAAAACATCGTTAGATTGTGGACCATTTTTGCTCCACTTTATAGAGAGCCTATGTCATAGGAAAAAACCGACAAAAGATGGTGGTAATGAAATGAGGAAGAAGATCCTGCTAAAGTTCATGGACATCAATATAACAAAAAGATTAGAGTCACTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

614

Amino Acids

72.65

Weight (kDa)

6.78

Isoelectric Point (pI)

52.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 674
AccB7I CCANNNNNTGG 1 cut(s) 1510
AccII CGCG 1 cut(s) 1473
AciI CCGC 3 cut(s) 442, 637, 1442
AclI AACGTT 1 cut(s) 1632
AclWI GGATC 5 cut(s) 114, 133, 407, 420, 1783
AcsI RAATTY 2 cut(s) 301, 527
AcuI CTGAAG 3 cut(s) 999, 1614, 1676
AfaI GTAC 1 cut(s) 1373
AfiI CCNNNNNNNGG 3 cut(s) 595, 1203, 1510
AflIII ACRYGT 2 cut(s) 1081, 1471
AjnI CCWGG 1 cut(s) 970
AluBI AGCT 6 cut(s) 121, 385, 844, 871, 1300, 1654
AluI AGCT 6 cut(s) 121, 385, 844, 871, 1300, 1654
Alw26I GTCTC 3 cut(s) 653, 1109, 1417
AlwI GGATC 5 cut(s) 114, 133, 407, 420, 1783
AlwNI CAGNNNCTG 1 cut(s) 977
ApeKI GCWGC 4 cut(s) 799, 802, 1439, 1678
ApoI RAATTY 2 cut(s) 301, 527
AseI ATTAAT 1 cut(s) 374
Asp700I GAANNNNTTC 1 cut(s) 1008
AspS9I GGNCC 4 cut(s) 755, 1513, 1624, 1706
AsuHPI GGTGA 3 cut(s) 340, 1330, 1456
AvaII GGWCC 4 cut(s) 755, 1513, 1624, 1706
AxyI CCTNAGG 1 cut(s) 1518
BaeGI GKGCMC 1 cut(s) 1162
BaeI ACNNNNGTAYC 2 cut(s) 458, 491
BamHI GGATCC 1 cut(s) 412
BanII GRGCYC 2 cut(s) 1074, 1100
BbsI GAAGAC 2 cut(s) 486, 1041
BbvI GCAGC 4 cut(s) 811, 814, 1451, 1690
BccI CCATC 5 cut(s) 672, 757, 1262, 1608, 1757
BciT130I CCWGG 1 cut(s) 972
BcoDI GTCTC 3 cut(s) 653, 1109, 1417
BfaI CTAG 2 cut(s) 734, 1427
BfmI CTRYAG 1 cut(s) 1676
BisI GCNGC 4 cut(s) 800, 803, 1440, 1679
BlsI GCNGC 4 cut(s) 801, 804, 1441, 1680
Bme1390I CCNGG 1 cut(s) 972
Bme18I GGWCC 4 cut(s) 755, 1513, 1624, 1706
BmgT120I GGNCC 4 cut(s) 755, 1513, 1624, 1706
BmiI GGNNCC 4 cut(s) 414, 567, 611, 1515
BmrFI CCNGG 1 cut(s) 972
BmsI GCATC 4 cut(s) 30, 501, 575, 1608
BpiI GAAGAC 2 cut(s) 486, 1041
BpmI CTGGAG 1 cut(s) 923
Bpu10I CCTNAGC 1 cut(s) 386
BpuEI CTTGAG 3 cut(s) 455, 635, 1058
Bsa29I ATCGAT 1 cut(s) 1056
BsaAI YACGTR 1 cut(s) 556
BsaI GGTCTC 1 cut(s) 1417
BsaJI CCNNGG 6 cut(s) 416, 538, 758, 824, 1504, 1555
BsaWI WCCGGW 1 cut(s) 785
BsaXI ACNNNNNCTCC 2 cut(s) 908, 938
Bsc4I CCNNNNNNNGG 3 cut(s) 595, 1203, 1510
Bse118I RCCGGY 1 cut(s) 931
Bse1I ACTGG 6 cut(s) 512, 611, 906, 1007, 1123, 1340
Bse21I CCTNAGG 1 cut(s) 1518
Bse3DI GCAATG 1 cut(s) 1386
BseBI CCWGG 1 cut(s) 972
BseCI ATCGAT 1 cut(s) 1056
BseDI CCNNGG 6 cut(s) 416, 538, 758, 824, 1504, 1555
BseGI GGATG 7 cut(s) 21, 259, 590, 768, 1312, 1360, 1623
BseLI CCNNNNNNNGG 3 cut(s) 595, 1203, 1510
BseMI GCAATG 1 cut(s) 1386
BseMII CTCAG 3 cut(s) 1428, 1509, 1513
BseNI ACTGG 6 cut(s) 512, 611, 906, 1007, 1123, 1340
BseRI GAGGAG 4 cut(s) 116, 785, 926, 929
BseSI GKGCMC 1 cut(s) 1162
BseXI GCAGC 4 cut(s) 811, 814, 1451, 1690
BsgI GTGCAG 1 cut(s) 976
Bsh1236I CGCG 1 cut(s) 1473
Bsh1285I CGRYCG 1 cut(s) 1056
BshVI ATCGAT 1 cut(s) 1056
BsiEI CGRYCG 1 cut(s) 1056
BsiSI CCGG 2 cut(s) 786, 932
BslI CCNNNNNNNGG 3 cut(s) 595, 1203, 1510
BsmAI GTCTC 3 cut(s) 653, 1109, 1417
Bso31I GGTCTC 1 cut(s) 1417
Bsp1286I GDGCHC 3 cut(s) 1074, 1100, 1162
Bsp143I GATC 7 cut(s) 106, 138, 412, 693, 1053, 1057, 1788
Bsp19I CCATGG 1 cut(s) 758
BspACI CCGC 3 cut(s) 442, 637, 1442
BspCNI CTCAG 3 cut(s) 1427, 1510, 1512
BspDI ATCGAT 1 cut(s) 1056
BspFNI CGCG 1 cut(s) 1473
BspLI GGNNCC 4 cut(s) 414, 567, 611, 1515
BspMAI CTGCAG 1 cut(s) 1680
BspPI GGATC 5 cut(s) 114, 133, 407, 420, 1783
BspQI GCTCTTC 2 cut(s) 375, 957
BspTNI GGTCTC 1 cut(s) 1417
BsrDI GCAATG 1 cut(s) 1386
BsrFI RCCGGY 1 cut(s) 931
BsrI ACTGG 6 cut(s) 512, 611, 906, 1007, 1123, 1340
BssAI RCCGGY 1 cut(s) 931
BssECI CCNNGG 6 cut(s) 416, 538, 758, 824, 1504, 1555
BssMI GATC 7 cut(s) 106, 138, 412, 693, 1053, 1057, 1788
BssT1I CCWWGG 6 cut(s) 416, 538, 758, 824, 1504, 1555
Bst2UI CCWGG 1 cut(s) 972
Bst4CI ACNGT 3 cut(s) 319, 1111, 1574
Bst6I CTCTTC 5 cut(s) 375, 933, 957, 975, 1590
BstBAI YACGTR 1 cut(s) 556
BstC8I GCNNGC 2 cut(s) 1215, 1676
BstDEI CTNAG 4 cut(s) 386, 1414, 1499, 1518
BstDSI CCRYGG 1 cut(s) 758
BstF5I GGATG 7 cut(s) 21, 259, 590, 768, 1312, 1360, 1623
BstFNI CGCG 1 cut(s) 1473
BstKTI GATC 7 cut(s) 109, 141, 415, 696, 1056, 1060, 1791
BstMAI GTCTC 3 cut(s) 653, 1109, 1417
BstMBI GATC 7 cut(s) 106, 138, 412, 693, 1053, 1057, 1788
BstMCI CGRYCG 1 cut(s) 1056
BstNI CCWGG 1 cut(s) 972
BstNSI RCATGY 1 cut(s) 1085
BstSCI CCNGG 1 cut(s) 970
BstSFI CTRYAG 1 cut(s) 1676
BstSLI GKGCMC 1 cut(s) 1162
BstUI CGCG 1 cut(s) 1473
BstV1I GCAGC 4 cut(s) 811, 814, 1451, 1690
BstV2I GAAGAC 2 cut(s) 486, 1041
BstX2I RGATCY 3 cut(s) 138, 412, 1788
BstYI RGATCY 3 cut(s) 138, 412, 1788
Bsu15I ATCGAT 1 cut(s) 1056
Bsu36I CCTNAGG 1 cut(s) 1518
BsuTUI ATCGAT 1 cut(s) 1056
BtgI CCRYGG 1 cut(s) 758
BtsCI GGATG 7 cut(s) 21, 259, 590, 768, 1312, 1360, 1623
BtsIMutI CAGTG 1 cut(s) 1284
Cac8I GCNNGC 2 cut(s) 1215, 1676
CaiI CAGNNNCTG 1 cut(s) 977
Cfr10I RCCGGY 1 cut(s) 931
Cfr13I GGNCC 4 cut(s) 755, 1513, 1624, 1706
ClaI ATCGAT 1 cut(s) 1056
Csp6I GTAC 1 cut(s) 1372
CspCI CAANNNNNGTGG 2 cut(s) 1215, 1250
CviAII CATG 6 cut(s) 36, 212, 759, 1082, 1293, 1804
CviQI GTAC 1 cut(s) 1372
DdeI CTNAG 4 cut(s) 386, 1414, 1499, 1518
DpnI GATC 7 cut(s) 108, 140, 414, 695, 1055, 1059, 1790
DpnII GATC 7 cut(s) 106, 138, 412, 693, 1053, 1057, 1788
Eam1104I CTCTTC 5 cut(s) 375, 933, 957, 975, 1590
EarI CTCTTC 5 cut(s) 375, 933, 957, 975, 1590
Eco130I CCWWGG 6 cut(s) 416, 538, 758, 824, 1504, 1555
Eco24I GRGCYC 2 cut(s) 1074, 1100
Eco31I GGTCTC 1 cut(s) 1417
Eco32I GATATC 2 cut(s) 262, 1663
Eco47I GGWCC 4 cut(s) 755, 1513, 1624, 1706
Eco57I CTGAAG 3 cut(s) 999, 1614, 1676
Eco81I CCTNAGG 1 cut(s) 1518
EcoRI GAATTC 1 cut(s) 527
EcoRII CCWGG 1 cut(s) 970
EcoRV GATATC 2 cut(s) 262, 1663
EcoT14I CCWWGG 6 cut(s) 416, 538, 758, 824, 1504, 1555
EcoT38I GRGCYC 2 cut(s) 1074, 1100
ErhI CCWWGG 6 cut(s) 416, 538, 758, 824, 1504, 1555
FaeI CATG 6 cut(s) 39, 215, 762, 1085, 1296, 1807
FalI AAGNNNNNCTT 2 cut(s) 1649, 1681
FatI CATG 6 cut(s) 35, 211, 758, 1081, 1292, 1803
FauI CCCGC 1 cut(s) 435
Fnu4HI GCNGC 4 cut(s) 800, 803, 1440, 1679
FokI GGATG 7 cut(s) 8, 266, 597, 775, 1319, 1367, 1630
FriOI GRGCYC 2 cut(s) 1074, 1100
Fsp4HI GCNGC 4 cut(s) 800, 803, 1440, 1679
FspBI CTAG 2 cut(s) 734, 1427
GluI GCNGC 4 cut(s) 800, 803, 1440, 1679
GsuI CTGGAG 1 cut(s) 923
HapII CCGG 2 cut(s) 786, 932
Hin1II CATG 6 cut(s) 39, 215, 762, 1085, 1296, 1807
HincII GTYRAC 2 cut(s) 1141, 1570
HindII GTYRAC 2 cut(s) 1141, 1570
HindIII AAGCTT 2 cut(s) 119, 869
HpaII CCGG 2 cut(s) 786, 932
HphI GGTGA 3 cut(s) 340, 1330, 1456
Hpy166II GTNNAC 5 cut(s) 1141, 1276, 1372, 1570, 1706
Hpy188I TCNGA 2 cut(s) 253, 1421
Hpy188III TCNNGA 3 cut(s) 646, 1031, 1075
Hpy8I GTNNAC 5 cut(s) 1141, 1276, 1372, 1570, 1706
HpyCH4III ACNGT 3 cut(s) 319, 1111, 1574
HpyCH4IV ACGT 3 cut(s) 555, 1153, 1632
HpyCH4V TGCA 6 cut(s) 285, 436, 535, 957, 1281, 1678
HpyF3I CTNAG 4 cut(s) 386, 1414, 1499, 1518
HpySE526I ACGT 3 cut(s) 555, 1153, 1632
Hsp92II CATG 6 cut(s) 39, 215, 762, 1085, 1296, 1807
Kzo9I GATC 7 cut(s) 106, 138, 412, 693, 1053, 1057, 1788
LguI GCTCTTC 2 cut(s) 375, 957
LmnI GCTCC 5 cut(s) 208, 565, 841, 1237, 1722
Lsp1109I GCAGC 4 cut(s) 811, 814, 1451, 1690
LweI GCATC 4 cut(s) 30, 501, 575, 1608
MaeI CTAG 2 cut(s) 734, 1427
MaeII ACGT 3 cut(s) 555, 1153, 1632
MaeIII GTNAC 5 cut(s) 161, 510, 1048, 1574, 1833
MalI GATC 7 cut(s) 108, 140, 414, 695, 1055, 1059, 1790
MboI GATC 7 cut(s) 106, 138, 412, 693, 1053, 1057, 1788
MfeI CAATTG 1 cut(s) 831
MflI RGATCY 3 cut(s) 138, 412, 1788
MhlI GDGCHC 3 cut(s) 1074, 1100, 1162
MluCI AATT 8 cut(s) 72, 130, 201, 225, 301, 527, 728, 831
MluI ACGCGT 1 cut(s) 1471
MlyI GAGTC 2 cut(s) 655, 1841
MmeI TCCRAC 1 cut(s) 1399
MroXI GAANNNNTTC 1 cut(s) 1008
MseI TTAA 2 cut(s) 198, 374
MslI CAYNNNNRTG 2 cut(s) 374, 1457
MspA1I CMGCKG 1 cut(s) 1442
MspI CCGG 2 cut(s) 786, 932
MspR9I CCNGG 1 cut(s) 972
MunI CAATTG 1 cut(s) 831
MvaI CCWGG 1 cut(s) 972
MvnI CGCG 1 cut(s) 1473
NcoI CCATGG 1 cut(s) 758
NdeII GATC 7 cut(s) 106, 138, 412, 693, 1053, 1057, 1788
NlaIII CATG 6 cut(s) 39, 215, 762, 1085, 1296, 1807
NlaIV GGNNCC 4 cut(s) 414, 567, 611, 1515
NmuCI GTSAC 4 cut(s) 161, 510, 1048, 1833
NspI RCATGY 1 cut(s) 1085
PciI ACATGT 1 cut(s) 1081
PciSI GCTCTTC 2 cut(s) 375, 957
PdmI GAANNNNTTC 1 cut(s) 1008
PfeI GAWTC 8 cut(s) 32, 125, 311, 394, 1321, 1422, 1447, 1481
PflMI CCANNNNNTGG 1 cut(s) 1510
PkrI GCNGC 4 cut(s) 801, 804, 1441, 1680
Ple19I CGATCG 1 cut(s) 1056
PleI GAGTC 2 cut(s) 655, 1840
PpsI GAGTC 2 cut(s) 655, 1840
Ppu21I YACGTR 1 cut(s) 556
PscI ACATGT 1 cut(s) 1081
PshBI ATTAAT 1 cut(s) 374
PsiI TTATAA 1 cut(s) 674
Psp1406I AACGTT 1 cut(s) 1632
Psp6I CCWGG 1 cut(s) 970
PspGI CCWGG 1 cut(s) 970
PspN4I GGNNCC 4 cut(s) 414, 567, 611, 1515
PspPI GGNCC 4 cut(s) 755, 1513, 1624, 1706
PstI CTGCAG 1 cut(s) 1680
PstNI CAGNNNCTG 1 cut(s) 977
PsuI RGATCY 3 cut(s) 138, 412, 1788
PvuI CGATCG 1 cut(s) 1056
RsaI GTAC 1 cut(s) 1373
RsaNI GTAC 1 cut(s) 1372
RseI CAYNNNNRTG 2 cut(s) 374, 1457
SapI GCTCTTC 2 cut(s) 375, 957
SaqAI TTAA 2 cut(s) 198, 374
SatI GCNGC 4 cut(s) 800, 803, 1440, 1679
Sau3AI GATC 7 cut(s) 106, 138, 412, 693, 1053, 1057, 1788
Sau96I GGNCC 4 cut(s) 755, 1513, 1624, 1706
SchI GAGTC 2 cut(s) 655, 1841
ScrFI CCNGG 1 cut(s) 972
SduI GDGCHC 3 cut(s) 1074, 1100, 1162
SfaNI GCATC 4 cut(s) 30, 501, 575, 1608
SfcI CTRYAG 1 cut(s) 1676
SinI GGWCC 4 cut(s) 755, 1513, 1624, 1706
SmiMI CAYNNNNRTG 2 cut(s) 374, 1457
SmlI CTYRAG 3 cut(s) 470, 614, 1073
SmoI CTYRAG 3 cut(s) 470, 614, 1073
Sse9I AATT 8 cut(s) 72, 130, 201, 225, 301, 527, 728, 831
SsiI CCGC 3 cut(s) 442, 637, 1442
SspMI CTAG 2 cut(s) 734, 1427
StyD4I CCNGG 1 cut(s) 970
StyI CCWWGG 6 cut(s) 416, 538, 758, 824, 1504, 1555
TaaI ACNGT 3 cut(s) 319, 1111, 1574
TaiI ACGT 3 cut(s) 558, 1156, 1635
TaqI TCGA 3 cut(s) 495, 1056, 1124
TasI AATT 8 cut(s) 72, 130, 201, 225, 301, 527, 728, 831
TfiI GAWTC 8 cut(s) 32, 125, 311, 394, 1321, 1422, 1447, 1481
Tru1I TTAA 2 cut(s) 198, 374
Tru9I TTAA 2 cut(s) 198, 374
TscAI CASTG 1 cut(s) 1291
TseFI GTSAC 4 cut(s) 161, 510, 1048, 1833
TseI GCWGC 4 cut(s) 799, 802, 1439, 1678
Tsp45I GTSAC 4 cut(s) 161, 510, 1048, 1833
TspGWI ACGGA 2 cut(s) 221, 1002
TspRI CASTG 1 cut(s) 1291
Van91I CCANNNNNTGG 1 cut(s) 1510
VpaK11BI GGWCC 4 cut(s) 755, 1513, 1624, 1706
VspI ATTAAT 1 cut(s) 374
XapI RAATTY 2 cut(s) 301, 527
XceI RCATGY 1 cut(s) 1085
XcmI CCANNNNNNNNNTGG 1 cut(s) 33
XmnI GAANNNNTTC 1 cut(s) 1008
XspI CTAG 2 cut(s) 734, 1427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.