Rorug06G0480200

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
60195928 .. 60199367
3440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0480200.1

Sequence Viewer

Length: 1308 bp
ATGGAGGGTTTCCGATACTTTACCGATACGCCGTCGCAGAACCCTATTCCCTATGATCAATCCCTAGAAGCTGCTTTCTCTCGCCTGAATGTCTCATCCTTCAGCCAGCCGCCGCCGTTTTCCGGCGCCGATTACAGTTCTGGGTCGGCGCCGAAATACCCATCACGCCGCAATGAACTCATGCCGGGTGGTTTTGATGGTGGGGTTTTCGGTCATTTGGGTCTTGAAGATTGCTGGGTTGGCTCAGATACTGATCATGGCTTAGGTGGGTTTGGTTCTAGTTTACATAAACCATCTGATTGGTCCCAAGAACCACTCAACAGCTTATCTGTGGCTGATTTGCGTGGAAAGATTGCTTCTTTGTCCATGGACCAATACGGGTGTCGGTTCTTTCAGAGAGCTATGGAGGATGAGCCGAAAGAGTTCACTGATATGATATTTGAAGAGGTTGTAGACCACGTGGCCCATTTGATCCTGGACCCTTATGGCAACTATGTTGTTCAGAAGCTTGTGGAGGTTTGTAGTGAGGAGCAGAGGACACAGATTCTGTTAAGGTGGACCAAGAATCCGTTTCATTTTATTACTCTTTGCCTTCATAGCCGTGGGACTCGCTCTGTTCTGAAACTGTTGAAGAAAATCACTACCCGAGAGCAAATCTCTGTGTTTGTGAGTGCTCTAAGCTGTGGTGCTGTTGACCTGAGTATGCACATCAATGGTCAACATATCATGGAATATTGCTTGAAGAACTTTTCGGATGAACACAAAAGGTGTCTTCTGAATGTGGTGATTGACAACTGTATTGGAATTGCAAAAGATAAGGTTGGTTGTTGCGTGCTACAGCAGTGTGTTGATTACTGTTATGGAGAAACAAAAGGACGTCTAATTGCTGCGATAATAGAAGAAGCATTAATCCTGGCGCAGGATCGTTATGGCAACTATGTGCTGCAACATTTACTCGGGTTGAGGGCACCACAAGTCACATCAAATCTTCTGAGACAGTTTCAAGGGAATTATATGTTTCTCTCCTGCAGCAAGTATGGTAGTAATGTTGTGGAGAAGTGCTTGTTAGAGTCGGGAGAAGAGCAGTCTGCAGAAATTATTAGAGAGTTGTGTAGAAGCCCAAATCTTTCAATGCTTCTTATGCATCCTTTCGGAAACTATGTCTTCCAGACGGCATTGTCAGTTTCTAAGGGTCTCACCCACAAGTTTCTGCTGAGTCTGGTTCAACATTACACCCCAGCTCTGCTCACCAATCAATATGGAAAAAGGGTGCTTGCTTGGCGTGAAAGGAACTTGCGACGTATGTAG

Protein Analysis

435

Amino Acids

49.07

Weight (kDa)

6.54

Isoelectric Point (pI)

47.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUF PF00806 118 - 150 5.2e-08 Pumilio-family RNA binding repeat
PUF PF00806 153 - 183 1.6e-10 Pumilio-family RNA binding repeat
PUF PF00806 265 - 299 1.4e-09 Pumilio-family RNA binding repeat
PUF PF00806 341 - 371 2.2e-06 Pumilio-family RNA binding repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1177
AatII GACGTC 1 cut(s) 880
AccB1I GGYRCC 3 cut(s) 125, 148, 967
AccI GTMKAC 1 cut(s) 453
AciI CCGC 3 cut(s) 110, 113, 169
AclWI GGATC 2 cut(s) 466, 930
AcuI CTGAAG 1 cut(s) 85
AcvI CACGTG 1 cut(s) 460
AcyI GRCGYC 3 cut(s) 126, 149, 877
AfiI CCNNNNNNNGG 2 cut(s) 122, 919
AgsI TTSAA 7 cut(s) 227, 443, 631, 742, 1004, 1131, 1226
AjnI CCWGG 2 cut(s) 474, 912
AluBI AGCT 6 cut(s) 71, 324, 401, 508, 681, 1241
AluI AGCT 6 cut(s) 71, 324, 401, 508, 681, 1241
Alw21I GWGCWC 1 cut(s) 676
Alw26I GTCTC 3 cut(s) 97, 988, 1199
AlwI GGATC 2 cut(s) 466, 930
AlwNI CAGNNNCTG 2 cut(s) 251, 547
Ama87I CYCGRG 2 cut(s) 645, 956
AoxI GGCC 1 cut(s) 462
ApeKI GCWGC 4 cut(s) 71, 887, 943, 1029
AseI ATTAAT 1 cut(s) 908
Asp700I GAANNNNTTC 1 cut(s) 422
AspLEI GCGC 3 cut(s) 128, 151, 919
AspS9I GGNCC 5 cut(s) 303, 370, 463, 478, 558
AsuC2I CCSGG 1 cut(s) 186
AsuHPI GGTGA 3 cut(s) 796, 1189, 1240
AvaI CYCGRG 2 cut(s) 645, 956
AvaII GGWCC 4 cut(s) 303, 370, 478, 558
BaeGI GKGCMC 1 cut(s) 970
BanI GGYRCC 3 cut(s) 125, 148, 967
BbrPI CACGTG 1 cut(s) 460
BbsI GAAGAC 2 cut(s) 764, 1156
Bbv12I GWGCWC 1 cut(s) 676
BbvI GCAGC 4 cut(s) 58, 874, 930, 1041
BccI CCATC 3 cut(s) 169, 191, 301
BceAI ACGGC 4 cut(s) 16, 100, 585, 1188
BciT130I CCWGG 2 cut(s) 476, 914
BclI TGATCA 2 cut(s) 55, 253
BcnI CCSGG 1 cut(s) 186
BcoDI GTCTC 3 cut(s) 97, 988, 1199
BfaI CTAG 2 cut(s) 65, 279
BfmI CTRYAG 3 cut(s) 836, 1027, 1089
BfoI RGCGCY 2 cut(s) 129, 152
BisI GCNGC 7 cut(s) 72, 110, 113, 169, 888, 944, 1030
BlsI GCNGC 7 cut(s) 73, 111, 114, 170, 889, 945, 1031
Bme1390I CCNGG 3 cut(s) 186, 476, 914
Bme18I GGWCC 4 cut(s) 303, 370, 478, 558
BmeT110I CYCGRG 2 cut(s) 645, 956
BmgT120I GGNCC 5 cut(s) 303, 370, 463, 478, 558
BmiI GGNNCC 5 cut(s) 127, 150, 305, 480, 969
BmrFI CCNGG 3 cut(s) 186, 476, 914
BmsI GCATC 1 cut(s) 1153
BpiI GAAGAC 2 cut(s) 764, 1156
BplI GAGNNNNNCTC 2 cut(s) 641, 673
Bpu10I CCTNAGC 1 cut(s) 262
BpuMI CCSGG 1 cut(s) 186
BsaAI YACGTR 1 cut(s) 460
BsaBI GATNNNNATC 1 cut(s) 252
BsaHI GRCGYC 3 cut(s) 126, 149, 877
BsaI GGTCTC 1 cut(s) 1199
BsaJI CCNNGG 2 cut(s) 366, 601
Bsc4I CCNNNNNNNGG 2 cut(s) 122, 919
Bse3DI GCAATG 1 cut(s) 178
Bse8I GATNNNNATC 1 cut(s) 252
BseBI CCWGG 2 cut(s) 476, 914
BseDI CCNNGG 2 cut(s) 366, 601
BseGI GGATG 4 cut(s) 95, 415, 760, 1144
BseJI GATNNNNATC 1 cut(s) 252
BseLI CCNNNNNNNGG 2 cut(s) 122, 919
BseMI GCAATG 1 cut(s) 178
BseMII CTCAG 4 cut(s) 258, 689, 983, 1205
BseRI GAGGAG 1 cut(s) 542
BseSI GKGCMC 1 cut(s) 970
BseXI GCAGC 4 cut(s) 58, 874, 930, 1041
BseYI CCCAGC 2 cut(s) 234, 1237
BshFI GGCC 1 cut(s) 464
BshNI GGYRCC 3 cut(s) 125, 148, 967
BsiHKAI GWGCWC 1 cut(s) 676
BsiHKCI CYCGRG 2 cut(s) 645, 956
BsiSI CCGG 2 cut(s) 123, 185
BslFI GGGAC 2 cut(s) 289, 619
BslI CCNNNNNNNGG 2 cut(s) 122, 919
BsmAI GTCTC 3 cut(s) 97, 988, 1199
BsmFI GGGAC 2 cut(s) 289, 619
BsnI GGCC 1 cut(s) 464
Bso31I GGTCTC 1 cut(s) 1199
BsoBI CYCGRG 2 cut(s) 645, 956
Bsp1286I GDGCHC 2 cut(s) 676, 970
Bsp143I GATC 4 cut(s) 55, 253, 471, 922
Bsp19I CCATGG 1 cut(s) 366
BspACI CCGC 3 cut(s) 110, 113, 169
BspANI GGCC 1 cut(s) 464
BspCNI CTCAG 4 cut(s) 257, 690, 984, 1206
BspLI GGNNCC 5 cut(s) 127, 150, 305, 480, 969
BspMAI CTGCAG 2 cut(s) 1031, 1093
BspPI GGATC 2 cut(s) 466, 930
BspQI GCTCTTC 1 cut(s) 1074
BspT107I GGYRCC 3 cut(s) 125, 148, 967
BspTNI GGTCTC 1 cut(s) 1199
BsrDI GCAATG 1 cut(s) 178
BssECI CCNNGG 2 cut(s) 366, 601
BssMI GATC 4 cut(s) 55, 253, 471, 922
BssNI GRCGYC 3 cut(s) 126, 149, 877
BssT1I CCWWGG 1 cut(s) 366
Bst2UI CCWGG 2 cut(s) 476, 914
Bst4CI ACNGT 5 cut(s) 137, 627, 797, 857, 999
Bst6I CTCTTC 2 cut(s) 438, 1074
BstACI GRCGYC 3 cut(s) 126, 149, 877
BstBAI YACGTR 1 cut(s) 460
BstC8I GCNNGC 3 cut(s) 107, 833, 1275
BstDEI CTNAG 7 cut(s) 244, 262, 677, 698, 992, 1188, 1214
BstDSI CCRYGG 2 cut(s) 366, 601
BstENI CCTNNNNNAGG 1 cut(s) 917
BstF5I GGATG 4 cut(s) 95, 415, 760, 1144
BstH2I RGCGCY 2 cut(s) 129, 152
BstHHI GCGC 3 cut(s) 128, 151, 919
BstKTI GATC 4 cut(s) 58, 256, 474, 925
BstMAI GTCTC 3 cut(s) 97, 988, 1199
BstMBI GATC 4 cut(s) 55, 253, 471, 922
BstMWI GCNNNNNNNGC 4 cut(s) 240, 597, 1141, 1279
BstNI CCWGG 2 cut(s) 476, 914
BstSCI CCNGG 3 cut(s) 184, 474, 912
BstSFI CTRYAG 3 cut(s) 836, 1027, 1089
BstSLI GKGCMC 1 cut(s) 970
BstV1I GCAGC 4 cut(s) 58, 874, 930, 1041
BstV2I GAAGAC 2 cut(s) 764, 1156
BstXI CCANNNNNNTGG 1 cut(s) 300
BsuRI GGCC 1 cut(s) 464
BtgI CCRYGG 2 cut(s) 366, 601
BtsCI GGATG 4 cut(s) 95, 415, 760, 1144
BtsI GCAGTG 1 cut(s) 848
BtsIMutI CAGTG 2 cut(s) 426, 848
Cac8I GCNNGC 3 cut(s) 107, 833, 1275
CaiI CAGNNNCTG 2 cut(s) 251, 547
CfoI GCGC 3 cut(s) 128, 151, 919
Cfr13I GGNCC 5 cut(s) 303, 370, 463, 478, 558
CviAII CATG 4 cut(s) 181, 257, 367, 727
DdeI CTNAG 7 cut(s) 244, 262, 677, 698, 992, 1188, 1214
DinI GGCGCC 2 cut(s) 127, 150
DpnI GATC 4 cut(s) 57, 255, 473, 924
DpnII GATC 4 cut(s) 55, 253, 471, 922
DrdI GACNNNNNNGTC 1 cut(s) 1177
DseDI GACNNNNNNGTC 1 cut(s) 1177
Eam1104I CTCTTC 2 cut(s) 438, 1074
EarI CTCTTC 2 cut(s) 438, 1074
Eco130I CCWWGG 1 cut(s) 366
Eco31I GGTCTC 1 cut(s) 1199
Eco47I GGWCC 4 cut(s) 303, 370, 478, 558
Eco57I CTGAAG 1 cut(s) 85
Eco72I CACGTG 1 cut(s) 460
Eco88I CYCGRG 2 cut(s) 645, 956
EcoNI CCTNNNNNAGG 1 cut(s) 917
EcoRII CCWGG 2 cut(s) 474, 912
EcoT14I CCWWGG 1 cut(s) 366
EcoT22I ATGCAT 1 cut(s) 1146
EgeI GGCGCC 2 cut(s) 127, 150
EheI GGCGCC 2 cut(s) 127, 150
ErhI CCWWGG 1 cut(s) 366
FaeI CATG 4 cut(s) 184, 260, 370, 730
FaqI GGGAC 2 cut(s) 289, 619
FatI CATG 4 cut(s) 180, 256, 366, 726
FbaI TGATCA 2 cut(s) 55, 253
FblI GTMKAC 1 cut(s) 453
Fnu4HI GCNGC 7 cut(s) 72, 110, 113, 169, 888, 944, 1030
FokI GGATG 4 cut(s) 82, 422, 767, 1131
Fsp4HI GCNGC 7 cut(s) 72, 110, 113, 169, 888, 944, 1030
FspBI CTAG 2 cut(s) 65, 279
GlaI GCGC 3 cut(s) 127, 150, 918
GluI GCNGC 7 cut(s) 72, 110, 113, 169, 888, 944, 1030
GsaI CCCAGC 2 cut(s) 238, 1241
HaeII RGCGCY 2 cut(s) 129, 152
HaeIII GGCC 1 cut(s) 464
HapII CCGG 2 cut(s) 123, 185
HhaI GCGC 3 cut(s) 128, 151, 919
Hin1I GRCGYC 3 cut(s) 126, 149, 877
Hin1II CATG 4 cut(s) 184, 260, 370, 730
Hin6I GCGC 3 cut(s) 126, 149, 917
HinP1I GCGC 3 cut(s) 126, 149, 917
HincII GTYRAC 2 cut(s) 694, 719
HindII GTYRAC 2 cut(s) 694, 719
HindIII AAGCTT 1 cut(s) 506
HinfI GANTC 5 cut(s) 544, 565, 607, 1070, 1216
HpaII CCGG 2 cut(s) 123, 185
HphI GGTGA 3 cut(s) 796, 1189, 1240
Hpy166II GTNNAC 6 cut(s) 284, 426, 454, 558, 694, 719
Hpy188III TCNNGA 3 cut(s) 224, 1074, 1168
Hpy8I GTNNAC 6 cut(s) 284, 426, 454, 558, 694, 719
Hpy99I CGWCG 2 cut(s) 37, 1302
HpyAV CCTTC 2 cut(s) 109, 602
HpyCH4III ACNGT 5 cut(s) 137, 627, 797, 857, 999
HpyCH4IV ACGT 3 cut(s) 459, 877, 1300
HpyCH4V TGCA 6 cut(s) 706, 809, 946, 1029, 1091, 1144
HpyF10VI GCNNNNNNNGC 4 cut(s) 240, 597, 1141, 1279
HpyF3I CTNAG 7 cut(s) 244, 262, 677, 698, 992, 1188, 1214
HpySE526I ACGT 3 cut(s) 459, 877, 1300
Hsp92I GRCGYC 3 cut(s) 126, 149, 877
Hsp92II CATG 4 cut(s) 184, 260, 370, 730
HspAI GCGC 3 cut(s) 126, 149, 917
KasI GGCGCC 2 cut(s) 125, 148
Ksp22I TGATCA 2 cut(s) 55, 253
Kzo9I GATC 4 cut(s) 55, 253, 471, 922
LguI GCTCTTC 1 cut(s) 1074
LmnI GCTCC 1 cut(s) 529
Lsp1109I GCAGC 4 cut(s) 58, 874, 930, 1041
LweI GCATC 1 cut(s) 1153
MaeI CTAG 2 cut(s) 65, 279
MaeII ACGT 3 cut(s) 459, 877, 1300
MaeIII GTNAC 1 cut(s) 976
MalI GATC 4 cut(s) 57, 255, 473, 924
MboI GATC 4 cut(s) 55, 253, 471, 922
MboII GAAGA 9 cut(s) 239, 455, 643, 754, 764, 911, 980, 1091, 1156
MhlI GDGCHC 2 cut(s) 676, 970
MluCI AATT 4 cut(s) 804, 882, 1009, 1095
Mly113I GGCGCC 2 cut(s) 126, 149
MlyI GAGTC 3 cut(s) 601, 1079, 1225
MnlI CCTC 6 cut(s) 400, 439, 508, 520, 528, 957
Mph1103I ATGCAT 1 cut(s) 1146
MroXI GAANNNNTTC 1 cut(s) 422
MseI TTAA 2 cut(s) 551, 908
MslI CAYNNNNRTG 3 cut(s) 431, 600, 711
MspI CCGG 2 cut(s) 123, 185
MspR9I CCNGG 3 cut(s) 186, 476, 914
MvaI CCWGG 2 cut(s) 476, 914
MwoI GCNNNNNNNGC 4 cut(s) 240, 597, 1141, 1279
NarI GGCGCC 2 cut(s) 126, 149
NciI CCSGG 1 cut(s) 186
NcoI CCATGG 1 cut(s) 366
NdeII GATC 4 cut(s) 55, 253, 471, 922
NlaIII CATG 4 cut(s) 184, 260, 370, 730
NlaIV GGNNCC 5 cut(s) 127, 150, 305, 480, 969
NmuCI GTSAC 1 cut(s) 976
NsiI ATGCAT 1 cut(s) 1146
PciSI GCTCTTC 1 cut(s) 1074
PdmI GAANNNNTTC 1 cut(s) 422
PfeI GAWTC 2 cut(s) 544, 565
PfoI TCCNGGA 1 cut(s) 474
PkrI GCNGC 7 cut(s) 73, 111, 114, 170, 889, 945, 1031
PleI GAGTC 3 cut(s) 601, 1078, 1224
PluTI GGCGCC 2 cut(s) 129, 152
PmaCI CACGTG 1 cut(s) 460
PmlI CACGTG 1 cut(s) 460
PpsI GAGTC 3 cut(s) 601, 1078, 1224
Ppu21I YACGTR 1 cut(s) 460
PshBI ATTAAT 1 cut(s) 908
Psp6I CCWGG 2 cut(s) 474, 912
PspCI CACGTG 1 cut(s) 460
PspFI CCCAGC 2 cut(s) 234, 1237
PspGI CCWGG 2 cut(s) 474, 912
PspN4I GGNNCC 5 cut(s) 127, 150, 305, 480, 969
PspPI GGNCC 5 cut(s) 303, 370, 463, 478, 558
PstI CTGCAG 2 cut(s) 1031, 1093
PstNI CAGNNNCTG 2 cut(s) 251, 547
RseI CAYNNNNRTG 3 cut(s) 431, 600, 711
SapI GCTCTTC 1 cut(s) 1074
SaqAI TTAA 2 cut(s) 551, 908
SatI GCNGC 7 cut(s) 72, 110, 113, 169, 888, 944, 1030
Sau3AI GATC 4 cut(s) 55, 253, 471, 922
Sau96I GGNCC 5 cut(s) 303, 370, 463, 478, 558
SchI GAGTC 3 cut(s) 601, 1079, 1225
ScrFI CCNGG 3 cut(s) 186, 476, 914
SduI GDGCHC 2 cut(s) 676, 970
SfaNI GCATC 1 cut(s) 1153
SfcI CTRYAG 3 cut(s) 836, 1027, 1089
SfoI GGCGCC 2 cut(s) 127, 150
SinI GGWCC 4 cut(s) 303, 370, 478, 558
SmiMI CAYNNNNRTG 3 cut(s) 431, 600, 711
Sse9I AATT 4 cut(s) 804, 882, 1009, 1095
SsiI CCGC 3 cut(s) 110, 113, 169
SspDI GGCGCC 2 cut(s) 125, 148
SspI AATATT 1 cut(s) 734
SspMI CTAG 2 cut(s) 65, 279
StyD4I CCNGG 3 cut(s) 184, 474, 912
StyI CCWWGG 1 cut(s) 366
TaaI ACNGT 5 cut(s) 137, 627, 797, 857, 999
TaiI ACGT 3 cut(s) 462, 880, 1303
TaqII GACCGA 1 cut(s) 200
TasI AATT 4 cut(s) 804, 882, 1009, 1095
TauI GCSGC 3 cut(s) 112, 115, 171
TfiI GAWTC 2 cut(s) 544, 565
Tru1I TTAA 2 cut(s) 551, 908
Tru9I TTAA 2 cut(s) 551, 908
TscAI CASTG 2 cut(s) 433, 848
TseFI GTSAC 1 cut(s) 976
TseI GCWGC 4 cut(s) 71, 887, 943, 1029
Tsp45I GTSAC 1 cut(s) 976
TspDTI ATGAA 4 cut(s) 189, 563, 584, 771
TspGWI ACGGA 1 cut(s) 558
TspRI CASTG 2 cut(s) 433, 848
VpaK11BI GGWCC 4 cut(s) 303, 370, 478, 558
VspI ATTAAT 1 cut(s) 908
XagI CCTNNNNNAGG 1 cut(s) 917
XmiI GTMKAC 1 cut(s) 453
XmnI GAANNNNTTC 1 cut(s) 422
XspI CTAG 2 cut(s) 65, 279
ZraI GACGTC 1 cut(s) 878
Zsp2I ATGCAT 1 cut(s) 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.