Rmu_sc0017535.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017535.1
OG0000060
Physical Location & Seq
Forward (+)
1071 .. 2667
1597 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017535.1_g000001.1.cds

Sequence Viewer

Length: 906 bp
atggacactttcgctacttgtagtcacaaggactacagagtagttggctggttctcgaatttaggacgaaccaggtcggtcactgatttattttggtttagtcggcaggtctacggtacgtctactaagtatcgagctcctattggcttaatattacggcgctgtggtatacccattcgggtcgccacatggaggtttggggatgttgttatggaaataacggaggaggatgtcacggctttatttcaccttccggctgaaggcgaagtgttcaatgtgaacaggagggtggtaagggaagagatggaagactctccaatatttggcagccctttaaagacgcaggctgtactaagaacaaaggtggaatcgaagctggtaactgagttgacaaagccggcagaagagaaagatgccaggaagatagtcgtgctaatgatcacatatctattcaacacattcttcttcacccgaaccggtgctcagatcacatgggatatggtcgccgtatgtgaatggattgagaccataaacatgtacaactggccaagattaattctgaacttcttgatggaagggttacaaaagtataggaggaacagtccatctattttgaatggatgccttcttctcatctattactggttccttgagaagaccaaggcaaagacctggatacctggaaagcagaatgaaactccacgattcatccgatggtcaataaaggaaatatttagtctggagcaaatgtacatgaacgaaaacttagccgtggatctgataaaagctggaccatggcctgcaaaaattagactggaagacctcgagctgggtgatgaggtgcgggacacaccaagctttgacaactgggtgagtggctcaactaagcttgtctgctgccagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

301

Amino Acids

35.13

Weight (kDa)

8.45

Isoelectric Point (pI)

36.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 97
AccB7I CCANNNNNTGG 1 cut(s) 323
AccI GTMKAC 3 cut(s) 111, 122, 169
AciI CCGC 1 cut(s) 844
AclWI GGATC 1 cut(s) 783
AcoI YGGCCR 1 cut(s) 545
AcsI RAATTY 1 cut(s) 58
AcuI CTGAAG 1 cut(s) 279
AfaI GTAC 4 cut(s) 118, 351, 539, 752
AfiI CCNNNNNNNGG 4 cut(s) 192, 260, 323, 829
AflIII ACRYGT 1 cut(s) 534
AgeI ACCGGT 1 cut(s) 476
AgsI TTSAA 3 cut(s) 274, 454, 616
AjnI CCWGG 4 cut(s) 71, 416, 671, 679
AluBI AGCT 6 cut(s) 137, 376, 788, 829, 858, 889
AluI AGCT 6 cut(s) 137, 376, 788, 829, 858, 889
Alw21I GWGCWC 2 cut(s) 139, 484
Alw26I GTCTC 1 cut(s) 518
AlwI GGATC 1 cut(s) 783
Ama87I CYCGRG 1 cut(s) 824
AoxI GGCC 2 cut(s) 545, 797
ApeKI GCWGC 2 cut(s) 327, 897
ApoI RAATTY 1 cut(s) 58
AseI ATTAAT 1 cut(s) 554
AsiGI ACCGGT 1 cut(s) 476
AspLEI GCGC 1 cut(s) 162
AspS9I GGNCC 1 cut(s) 791
AsuHPI GGTGA 4 cut(s) 239, 460, 845, 883
AvaI CYCGRG 1 cut(s) 824
AvaII GGWCC 1 cut(s) 791
BalI TGGCCA 1 cut(s) 547
BanII GRGCYC 1 cut(s) 139
BbsI GAAGAC 3 cut(s) 315, 662, 825
Bbv12I GWGCWC 2 cut(s) 139, 484
BbvI GCAGC 2 cut(s) 339, 884
BccI CCATC 4 cut(s) 298, 565, 613, 708
BceAI ACGGC 4 cut(s) 173, 252, 491, 755
BciT130I CCWGG 4 cut(s) 73, 418, 673, 681
BciVI GTATCC 1 cut(s) 669
BclI TGATCA 1 cut(s) 438
BcoDI GTCTC 1 cut(s) 518
BfmI CTRYAG 1 cut(s) 34
BfoI RGCGCY 1 cut(s) 163
BfuAI ACCTGC 1 cut(s) 97
BfuI GTATCC 1 cut(s) 669
BisI GCNGC 2 cut(s) 328, 898
BlsI GCNGC 2 cut(s) 329, 899
Bme1390I CCNGG 4 cut(s) 73, 418, 673, 681
Bme18I GGWCC 1 cut(s) 791
BmeT110I CYCGRG 1 cut(s) 824
BmgT120I GGNCC 1 cut(s) 791
BmiI GGNNCC 1 cut(s) 647
BmrFI CCNGG 4 cut(s) 73, 418, 673, 681
BmrI ACTGGG 1 cut(s) 877
BmsI GCATC 2 cut(s) 403, 611
BmuI ACTGGG 1 cut(s) 877
BpiI GAAGAC 3 cut(s) 315, 662, 825
BpmI CTGGAG 1 cut(s) 761
BpuEI CTTGAG 1 cut(s) 671
BsaI GGTCTC 1 cut(s) 518
BsaJI CCNNGG 3 cut(s) 660, 771, 794
BsaWI WCCGGW 1 cut(s) 476
BsaXI ACNNNNNCTCC 4 cut(s) 586, 616, 734, 764
Bsc4I CCNNNNNNNGG 4 cut(s) 192, 260, 323, 829
Bse118I RCCGGY 2 cut(s) 397, 476
Bse1I ACTGG 5 cut(s) 548, 647, 819, 872, 901
BseBI CCWGG 4 cut(s) 73, 418, 673, 681
BseDI CCNNGG 3 cut(s) 660, 771, 794
BseGI GGATG 4 cut(s) 208, 235, 626, 708
BseLI CCNNNNNNNGG 4 cut(s) 192, 260, 323, 829
BseMII CTCAG 2 cut(s) 375, 497
BseNI ACTGG 5 cut(s) 548, 647, 819, 872, 901
BseRI GAGGAG 1 cut(s) 239
BseXI GCAGC 2 cut(s) 339, 884
BseYI CCCAGC 1 cut(s) 829
BshFI GGCC 2 cut(s) 547, 799
BshTI ACCGGT 1 cut(s) 476
BsiHKAI GWGCWC 2 cut(s) 139, 484
BsiHKCI CYCGRG 1 cut(s) 824
BsiSI CCGG 3 cut(s) 254, 398, 477
BslFI GGGAC 1 cut(s) 860
BslI CCNNNNNNNGG 4 cut(s) 192, 260, 323, 829
BsmAI GTCTC 1 cut(s) 518
BsmFI GGGAC 1 cut(s) 860
BsnI GGCC 2 cut(s) 547, 799
Bso31I GGTCTC 1 cut(s) 518
BsoBI CYCGRG 1 cut(s) 824
Bsp1286I GDGCHC 2 cut(s) 139, 484
Bsp1407I TGTACA 2 cut(s) 537, 750
Bsp143I GATC 3 cut(s) 438, 486, 775
Bsp19I CCATGG 1 cut(s) 794
BspACI CCGC 1 cut(s) 844
BspANI GGCC 2 cut(s) 547, 799
BspCNI CTCAG 2 cut(s) 376, 496
BspLI GGNNCC 1 cut(s) 647
BspMI ACCTGC 1 cut(s) 97
BspPI GGATC 1 cut(s) 783
BspTNI GGTCTC 1 cut(s) 518
BsrFI RCCGGY 2 cut(s) 397, 476
BsrGI TGTACA 2 cut(s) 537, 750
BsrI ACTGG 5 cut(s) 548, 647, 819, 872, 901
BssAI RCCGGY 2 cut(s) 397, 476
BssECI CCNNGG 3 cut(s) 660, 771, 794
BssMI GATC 3 cut(s) 438, 486, 775
BssNAI GTATAC 1 cut(s) 170
BssT1I CCWWGG 2 cut(s) 660, 794
Bst1107I GTATAC 1 cut(s) 170
Bst2UI CCWGG 4 cut(s) 73, 418, 673, 681
Bst4CI ACNGT 2 cut(s) 116, 602
Bst6I CTCTTC 2 cut(s) 294, 399
BstAUI TGTACA 2 cut(s) 537, 750
BstC8I GCNNGC 3 cut(s) 345, 399, 801
BstDEI CTNAG 6 cut(s) 126, 353, 384, 483, 766, 885
BstDSI CCRYGG 2 cut(s) 771, 794
BstF5I GGATG 4 cut(s) 208, 235, 626, 708
BstH2I RGCGCY 1 cut(s) 163
BstHHI GCGC 1 cut(s) 162
BstKTI GATC 3 cut(s) 441, 489, 778
BstMAI GTCTC 1 cut(s) 518
BstMBI GATC 3 cut(s) 438, 486, 775
BstNI CCWGG 4 cut(s) 73, 418, 673, 681
BstNSI RCATGY 1 cut(s) 538
BstSCI CCNGG 4 cut(s) 71, 416, 671, 679
BstSFI CTRYAG 1 cut(s) 34
BstV1I GCAGC 2 cut(s) 339, 884
BstV2I GAAGAC 3 cut(s) 315, 662, 825
BstX2I RGATCY 1 cut(s) 775
BstYI RGATCY 1 cut(s) 775
BstZ17I GTATAC 1 cut(s) 170
BsuI GTATCC 1 cut(s) 669
BsuRI GGCC 2 cut(s) 547, 799
BtgI CCRYGG 2 cut(s) 771, 794
BtsCI GGATG 4 cut(s) 208, 235, 626, 708
BtsIMutI CAGTG 1 cut(s) 81
BveI ACCTGC 1 cut(s) 97
Cac8I GCNNGC 3 cut(s) 345, 399, 801
CfoI GCGC 1 cut(s) 162
Cfr10I RCCGGY 2 cut(s) 397, 476
Cfr13I GGNCC 1 cut(s) 791
CseI GACGC 1 cut(s) 349
CsiI ACCWGGT 1 cut(s) 71
Csp6I GTAC 4 cut(s) 117, 350, 538, 751
CspAI ACCGGT 1 cut(s) 476
CviAII CATG 5 cut(s) 189, 492, 535, 754, 795
CviQI GTAC 4 cut(s) 117, 350, 538, 751
DdeI CTNAG 6 cut(s) 126, 353, 384, 483, 766, 885
DpnI GATC 3 cut(s) 440, 488, 777
DpnII GATC 3 cut(s) 438, 486, 775
DraI TTTAAA 1 cut(s) 336
EaeI YGGCCR 1 cut(s) 545
Eam1104I CTCTTC 2 cut(s) 294, 399
EarI CTCTTC 2 cut(s) 294, 399
Ecl136II GAGCTC 1 cut(s) 137
Eco130I CCWWGG 2 cut(s) 660, 794
Eco24I GRGCYC 1 cut(s) 139
Eco31I GGTCTC 1 cut(s) 518
Eco47I GGWCC 1 cut(s) 791
Eco53kI GAGCTC 1 cut(s) 137
Eco57I CTGAAG 1 cut(s) 279
Eco88I CYCGRG 1 cut(s) 824
EcoICRI GAGCTC 1 cut(s) 137
EcoRII CCWGG 4 cut(s) 71, 416, 671, 679
EcoT14I CCWWGG 2 cut(s) 660, 794
EcoT38I GRGCYC 1 cut(s) 139
ErhI CCWWGG 2 cut(s) 660, 794
FaeI CATG 5 cut(s) 192, 495, 538, 757, 798
FaqI GGGAC 1 cut(s) 860
FatI CATG 5 cut(s) 188, 491, 534, 753, 794
FauI CCCGC 1 cut(s) 837
FbaI TGATCA 1 cut(s) 438
FblI GTMKAC 3 cut(s) 111, 122, 169
Fnu4HI GCNGC 2 cut(s) 328, 898
FokI GGATG 4 cut(s) 215, 242, 633, 695
FriOI GRGCYC 1 cut(s) 139
Fsp4HI GCNGC 2 cut(s) 328, 898
GlaI GCGC 1 cut(s) 161
GluI GCNGC 2 cut(s) 328, 898
GsaI CCCAGC 1 cut(s) 833
GsuI CTGGAG 1 cut(s) 761
HaeII RGCGCY 1 cut(s) 163
HaeIII GGCC 2 cut(s) 547, 799
HapII CCGG 3 cut(s) 254, 398, 477
HgaI GACGC 1 cut(s) 349
HhaI GCGC 1 cut(s) 162
Hin1II CATG 5 cut(s) 192, 495, 538, 757, 798
Hin6I GCGC 1 cut(s) 160
HinP1I GCGC 1 cut(s) 160
HincII GTYRAC 1 cut(s) 390
HindII GTYRAC 1 cut(s) 390
HindIII AAGCTT 2 cut(s) 856, 887
HinfI GANTC 3 cut(s) 311, 368, 705
HpaII CCGG 3 cut(s) 254, 398, 477
HphI GGTGA 4 cut(s) 239, 460, 845, 883
Hpy166II GTNNAC 5 cut(s) 112, 123, 170, 280, 390
Hpy188I TCNGA 4 cut(s) 486, 561, 713, 780
Hpy188III TCNNGA 3 cut(s) 55, 568, 740
Hpy8I GTNNAC 5 cut(s) 112, 123, 170, 280, 390
HpyAV CCTTC 4 cut(s) 254, 260, 569, 635
HpyCH4III ACNGT 2 cut(s) 116, 602
HpyCH4IV ACGT 1 cut(s) 119
HpyCH4V TGCA 1 cut(s) 803
HpyF3I CTNAG 6 cut(s) 126, 353, 384, 483, 766, 885
HpySE526I ACGT 1 cut(s) 119
Hsp92II CATG 5 cut(s) 192, 495, 538, 757, 798
HspAI GCGC 1 cut(s) 160
KroI GCCGGC 1 cut(s) 397
KroNI GCCGGC 1 cut(s) 399
Ksp22I TGATCA 1 cut(s) 438
Kzo9I GATC 3 cut(s) 438, 486, 775
LmnI GCTCC 2 cut(s) 142, 742
Lsp1109I GCAGC 2 cut(s) 339, 884
LweI GCATC 2 cut(s) 403, 611
MabI ACCWGGT 1 cut(s) 71
MaeII ACGT 1 cut(s) 119
MaeIII GTNAC 5 cut(s) 23, 79, 232, 379, 579
MalI GATC 3 cut(s) 440, 488, 777
MboI GATC 3 cut(s) 438, 486, 775
MboII GAAGA 9 cut(s) 311, 320, 416, 433, 454, 457, 620, 667, 830
MflI RGATCY 1 cut(s) 775
MhlI GDGCHC 2 cut(s) 139, 484
MlsI TGGCCA 1 cut(s) 547
MluCI AATT 3 cut(s) 58, 555, 807
MluNI TGGCCA 1 cut(s) 547
MlyI GAGTC 1 cut(s) 305
MnlI CCTC 7 cut(s) 186, 217, 220, 279, 588, 832, 833
Mox20I TGGCCA 1 cut(s) 547
MroNI GCCGGC 1 cut(s) 397
MscI TGGCCA 1 cut(s) 547
MseI TTAA 3 cut(s) 149, 335, 554
MslI CAYNNNNRTG 1 cut(s) 533
Msp20I TGGCCA 1 cut(s) 547
MspI CCGG 3 cut(s) 254, 398, 477
MspR9I CCNGG 4 cut(s) 73, 418, 673, 681
MvaI CCWGG 4 cut(s) 73, 418, 673, 681
NaeI GCCGGC 1 cut(s) 399
NcoI CCATGG 1 cut(s) 794
NdeII GATC 3 cut(s) 438, 486, 775
NgoMIV GCCGGC 1 cut(s) 397
NlaIII CATG 5 cut(s) 192, 495, 538, 757, 798
NlaIV GGNNCC 1 cut(s) 647
NmuCI GTSAC 3 cut(s) 23, 79, 232
NspI RCATGY 1 cut(s) 538
PaeR7I CTCGAG 1 cut(s) 824
PciI ACATGT 1 cut(s) 534
PcsI WCGNNNNNNNCGW 1 cut(s) 709
PdiI GCCGGC 1 cut(s) 399
PfeI GAWTC 2 cut(s) 368, 705
PflMI CCANNNNNTGG 1 cut(s) 323
PinAI ACCGGT 1 cut(s) 476
PkrI GCNGC 2 cut(s) 329, 899
PleI GAGTC 1 cut(s) 305
PpsI GAGTC 1 cut(s) 305
PscI ACATGT 1 cut(s) 534
PshBI ATTAAT 1 cut(s) 554
Psp124BI GAGCTC 1 cut(s) 139
Psp6I CCWGG 4 cut(s) 71, 416, 671, 679
PspFI CCCAGC 1 cut(s) 829
PspGI CCWGG 4 cut(s) 71, 416, 671, 679
PspN4I GGNNCC 1 cut(s) 647
PspPI GGNCC 1 cut(s) 791
PspXI VCTCGAGB 1 cut(s) 824
PsuI RGATCY 1 cut(s) 775
RsaI GTAC 4 cut(s) 118, 351, 539, 752
RsaNI GTAC 4 cut(s) 117, 350, 538, 751
RseI CAYNNNNRTG 1 cut(s) 533
SacI GAGCTC 1 cut(s) 139
SaqAI TTAA 3 cut(s) 149, 335, 554
SatI GCNGC 2 cut(s) 328, 898
Sau3AI GATC 3 cut(s) 438, 486, 775
Sau96I GGNCC 1 cut(s) 791
SchI GAGTC 1 cut(s) 305
ScrFI CCNGG 4 cut(s) 73, 418, 673, 681
SduI GDGCHC 2 cut(s) 139, 484
SexAI ACCWGGT 1 cut(s) 71
SfaNI GCATC 2 cut(s) 403, 611
SfcI CTRYAG 1 cut(s) 34
Sfr274I CTCGAG 1 cut(s) 824
SinI GGWCC 1 cut(s) 791
SlaI CTCGAG 1 cut(s) 824
SmiMI CAYNNNNRTG 1 cut(s) 533
SmlI CTYRAG 2 cut(s) 650, 824
SmoI CTYRAG 2 cut(s) 650, 824
Sse9I AATT 3 cut(s) 58, 555, 807
SsiI CCGC 1 cut(s) 844
SspI AATATT 3 cut(s) 153, 321, 732
SstI GAGCTC 1 cut(s) 139
StyD4I CCNGG 4 cut(s) 71, 416, 671, 679
StyI CCWWGG 2 cut(s) 660, 794
TaaI ACNGT 2 cut(s) 116, 602
TaiI ACGT 1 cut(s) 122
TaqI TCGA 4 cut(s) 56, 133, 371, 825
TaqII GACCGA 1 cut(s) 67
TasI AATT 3 cut(s) 58, 555, 807
TatI WGTACW 3 cut(s) 349, 537, 750
TfiI GAWTC 2 cut(s) 368, 705
Tru1I TTAA 3 cut(s) 149, 335, 554
Tru9I TTAA 3 cut(s) 149, 335, 554
TscAI CASTG 1 cut(s) 88
TseFI GTSAC 3 cut(s) 23, 79, 232
TseI GCWGC 2 cut(s) 327, 897
Tsp45I GTSAC 3 cut(s) 23, 79, 232
TspDTI ATGAA 3 cut(s) 697, 708, 770
TspGWI ACGGA 1 cut(s) 236
TspRI CASTG 1 cut(s) 88
Van91I CCANNNNNTGG 1 cut(s) 323
VpaK11BI GGWCC 1 cut(s) 791
VspI ATTAAT 1 cut(s) 554
XapI RAATTY 1 cut(s) 58
XceI RCATGY 1 cut(s) 538
XhoI CTCGAG 1 cut(s) 824
XmiI GTMKAC 3 cut(s) 111, 122, 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.