Rmu_sc0010824.1_g000010

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010824.1
OG0000060
Physical Location & Seq
Reverse (-)
20409 .. 22821
2413 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010824.1_g000010.1.cds

Sequence Viewer

Length: 1749 bp
atgaagcatctgcagaagaaggggtcaatcaaggttccgagcaatcactcgaaaacgaatcagaatcacaaggtgaacagacaacgaaaaaggtttatcataaaaacaagacaacagacaaaaaggaaaatagttgaagaagaagccaattcaagcgaagcagaaacaaggaagaggagaaatgttcaaccgtcgaagagtaaagggaagaaggctgtaaaagggacaaagaagaaggaagaaccgaagaaggaggtccaaaaagctaagattgaatggaggcagcagaagtgcacactcagttccttctggagagtggtagacgcacacaaggagagaataccagaagaaacaaaggaaattttgaggggaacagattttggtgagatgatcaaaccattgtgggaagacaagataaccgagaaccagctcattaagcatgaagcagacttggaggtaataatgaggcacttcgaccacaaggacagcaattggaagtttggtgatgttgttatggaaattacgaaagcagacatcacgactttgtttcaccttcctgccgaaggagaagtgttcaatgtgaacaaaagggtcaggaaagaaatggaagactccccaatttttggcagccctttaaagaagcaggctgtacttagatctgatgtggaaaaaaagctcataactgagttgaagaagccggcaaaactgaaggacgcacggaagctagccgtgttgatgatcacgtacctgttcagcacgttcttcttcaccagaactggggctcagattacatgggattgccaaagaattgggaccatcaacaagtacaattggccaaggttgattctgaacttcttgatggaagggctgcaaaaatataggagaaacagactgggcgacattgagctggatgatgaggtgaagggcaccctaagcttcgactcctgggttccccaggcaagccaagctaaagaggaacaaaacaaaaggcttatggggaatatcaaagaactcatcagtgagatgggggcagaaattggtgagacgaaaccccccaaagagatggaggaaaagctagaaaggcttgcgaaagcaaacgaggacctcaatgcccagaacagggatttatgggcaaagctaaagatggccgacgagaagattaaaggtctcgaagtagttccatttacacccagagtggcacaagaagaagttgaggaagaaactccaaactttggagcaagtttgggagaggaaacaagttatgcagcccatgtgggacatgagacgaagagggtgatatcagcatttcctctggctatggaactacatgaccaacgagaaggtggggaacaagaggaggaagcacatcttgatatgatcgtgaacatgattgttgaaaatgaagagaatgcggacattggaaagaaaaaggaggaaaaaggtgccccaggaaagcaaaaagagaagaaaaacatggagatcatgtctatagagaaaaatgtcaagacatacaagcggggtgcgaagaaagccaaagaagatgattgggagtacgacacacccgaagaagcaaagatgaggaagagagccccacctaagagagctaggatcgtgccgccgaccagaaaaatggagaacaagatcaagatcaagggtgtcaactgcgataaacctacttggaggacattggacccggcaatcggaaagcactttcaagaattcttcaatgctactgcaaaagacacataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

582

Amino Acids

67.55

Weight (kDa)

9.4

Isoelectric Point (pI)

44.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 926, 1442
AccB7I CCANNNNNTGG 2 cut(s) 623, 1232
AccI GTMKAC 1 cut(s) 321
AciI CCGC 3 cut(s) 1412, 1516, 1616
AclWI GGATC 1 cut(s) 1616
AcoI YGGCCR 2 cut(s) 833, 1146
AcsI RAATTY 2 cut(s) 360, 1718
AcuI CTGAAG 1 cut(s) 728
AdeI CACNNNGTG 1 cut(s) 73
AfaI GTAC 4 cut(s) 651, 746, 827, 1553
AfiI CCNNNNNNNGG 7 cut(s) 563, 623, 777, 1119, 1120, 1232, 1700
AgsI TTSAA 9 cut(s) 137, 153, 188, 275, 577, 691, 1397, 1715, 1726
AjnI CCWGG 3 cut(s) 944, 954, 1447
Alw21I GWGCWC 1 cut(s) 296
Alw26I GTCTC 3 cut(s) 1037, 1172, 1277
Alw44I GTGCAC 1 cut(s) 292
AlwI GGATC 1 cut(s) 1616
AoxI GGCC 2 cut(s) 833, 1146
ApaLI GTGCAC 1 cut(s) 292
ApeKI GCWGC 4 cut(s) 283, 627, 868, 1265
ApoI RAATTY 2 cut(s) 360, 1718
Asp700I GAANNNNTTC 1 cut(s) 1176
AspS9I GGNCC 4 cut(s) 256, 813, 1102, 1690
AsuC2I CCSGG 1 cut(s) 1694
AsuHPI GGTGA 8 cut(s) 85, 395, 515, 542, 760, 931, 1052, 1306
AsuNHI GCTAGC 1 cut(s) 724
AvaII GGWCC 4 cut(s) 256, 813, 1102, 1690
BaeGI GKGCMC 3 cut(s) 296, 929, 1447
BalI TGGCCA 1 cut(s) 835
BanI GGYRCC 2 cut(s) 926, 1442
BanII GRGCYC 2 cut(s) 784, 1591
BbsI GAAGAC 2 cut(s) 414, 615
Bbv12I GWGCWC 1 cut(s) 296
BbvI GCAGC 4 cut(s) 295, 639, 855, 1277
BccI CCATC 5 cut(s) 824, 853, 1018, 1057, 1138
BceAI ACGGC 1 cut(s) 713
BciT130I CCWGG 3 cut(s) 946, 956, 1449
BclI TGATCA 2 cut(s) 390, 738
BcnI CCSGG 1 cut(s) 1694
BcoDI GTCTC 3 cut(s) 1037, 1172, 1277
BfaI CTAG 3 cut(s) 725, 1076, 1605
BfmI CTRYAG 2 cut(s) 11, 1488
BglII AGATCT 1 cut(s) 656
BisI GCNGC 5 cut(s) 284, 628, 869, 1266, 1616
BlsI GCNGC 5 cut(s) 285, 629, 870, 1267, 1617
Bme1390I CCNGG 4 cut(s) 946, 956, 1449, 1694
Bme18I GGWCC 4 cut(s) 256, 813, 1102, 1690
BmgT120I GGNCC 4 cut(s) 256, 813, 1102, 1690
BmiI GGNNCC 6 cut(s) 36, 814, 928, 951, 1444, 1692
BmrFI CCNGG 4 cut(s) 946, 956, 1449, 1694
BmrI ACTGGG 2 cut(s) 786, 902
BmsI GCATC 1 cut(s) 16
BmtI GCTAGC 1 cut(s) 728
BmuI ACTGGG 2 cut(s) 786, 902
BpiI GAAGAC 2 cut(s) 414, 615
BpmI CTGGAG 1 cut(s) 331
Bpu10I CCTNAGC 1 cut(s) 932
BpuMI CCSGG 1 cut(s) 1694
BsaAI YACGTR 1 cut(s) 744
BsaBI GATNNNNATC 1 cut(s) 1646
BsaI GGTCTC 1 cut(s) 1172
BsaJI CCNNGG 4 cut(s) 836, 945, 954, 1447
BsaXI ACNNNNNCTCC 2 cut(s) 1469, 1499
Bsc4I CCNNNNNNNGG 7 cut(s) 563, 623, 777, 1119, 1120, 1232, 1700
Bse118I RCCGGY 1 cut(s) 697
Bse1I ACTGG 2 cut(s) 781, 897
Bse8I GATNNNNATC 1 cut(s) 1646
BseBI CCWGG 3 cut(s) 946, 956, 1449
BseDI CCNNGG 4 cut(s) 836, 945, 954, 1447
BseGI GGATG 1 cut(s) 916
BseJI GATNNNNATC 1 cut(s) 1646
BseLI CCNNNNNNNGG 7 cut(s) 563, 623, 777, 1119, 1120, 1232, 1700
BseMII CTCAG 3 cut(s) 313, 675, 797
BseNI ACTGG 2 cut(s) 781, 897
BseRI GAGGAG 2 cut(s) 190, 1370
BseSI GKGCMC 3 cut(s) 296, 929, 1447
BseXI GCAGC 4 cut(s) 295, 639, 855, 1277
BshFI GGCC 2 cut(s) 835, 1148
BshNI GGYRCC 2 cut(s) 926, 1442
BsiHKAI GWGCWC 1 cut(s) 296
BsiSI CCGG 2 cut(s) 698, 1694
BslFI GGGAC 3 cut(s) 238, 826, 1290
BslI CCNNNNNNNGG 7 cut(s) 563, 623, 777, 1119, 1120, 1232, 1700
BsmAI GTCTC 3 cut(s) 1037, 1172, 1277
BsmBI CGTCTC 2 cut(s) 1037, 1277
BsmFI GGGAC 3 cut(s) 238, 826, 1290
BsmI GAATGC 1 cut(s) 1414
BsnI GGCC 2 cut(s) 835, 1148
Bso31I GGTCTC 1 cut(s) 1172
Bsp1286I GDGCHC 5 cut(s) 296, 784, 929, 1447, 1591
Bsp143I GATC 8 cut(s) 390, 656, 738, 1377, 1479, 1608, 1641, 1647
BspACI CCGC 3 cut(s) 1412, 1516, 1616
BspANI GGCC 2 cut(s) 835, 1148
BspCNI CTCAG 3 cut(s) 312, 676, 796
BspLI GGNNCC 6 cut(s) 36, 814, 928, 951, 1444, 1692
BspMAI CTGCAG 1 cut(s) 15
BspOI GCTAGC 1 cut(s) 728
BspPI GGATC 1 cut(s) 1616
BspT107I GGYRCC 2 cut(s) 926, 1442
BspTNI GGTCTC 1 cut(s) 1172
BsrFI RCCGGY 1 cut(s) 697
BsrI ACTGG 2 cut(s) 781, 897
BssAI RCCGGY 1 cut(s) 697
BssECI CCNNGG 4 cut(s) 836, 945, 954, 1447
BssMI GATC 8 cut(s) 390, 656, 738, 1377, 1479, 1608, 1641, 1647
BssT1I CCWWGG 1 cut(s) 836
Bst2UI CCWGG 3 cut(s) 946, 956, 1449
Bst4CI ACNGT 1 cut(s) 192
Bst6I CTCTTC 5 cut(s) 167, 191, 1283, 1398, 1577
BstBAI YACGTR 1 cut(s) 744
BstC8I GCNNGC 5 cut(s) 645, 699, 726, 961, 1086
BstDEI CTNAG 7 cut(s) 267, 299, 653, 684, 783, 932, 1596
BstENI CCTNNNNNAGG 1 cut(s) 561
BstF5I GGATG 1 cut(s) 916
BstKTI GATC 8 cut(s) 393, 659, 741, 1380, 1482, 1611, 1644, 1650
BstMAI GTCTC 3 cut(s) 1037, 1172, 1277
BstMBI GATC 8 cut(s) 390, 656, 738, 1377, 1479, 1608, 1641, 1647
BstMWI GCNNNNNNNGC 5 cut(s) 436, 933, 965, 1081, 1529
BstNI CCWGG 3 cut(s) 946, 956, 1449
BstSCI CCNGG 4 cut(s) 944, 954, 1447, 1692
BstSFI CTRYAG 2 cut(s) 11, 1488
BstSLI GKGCMC 3 cut(s) 296, 929, 1447
BstV1I GCAGC 4 cut(s) 295, 639, 855, 1277
BstV2I GAAGAC 2 cut(s) 414, 615
BstX2I RGATCY 1 cut(s) 656
BstXI CCANNNNNNTGG 3 cut(s) 809, 1063, 1630
BstYI RGATCY 1 cut(s) 656
BsuRI GGCC 2 cut(s) 835, 1148
BtsCI GGATG 1 cut(s) 916
BtsIMutI CAGTG 1 cut(s) 1024
Cac8I GCNNGC 5 cut(s) 645, 699, 726, 961, 1086
Cfr10I RCCGGY 1 cut(s) 697
Cfr13I GGNCC 4 cut(s) 256, 813, 1102, 1690
CseI GACGC 2 cut(s) 332, 722
Csp6I GTAC 4 cut(s) 650, 745, 826, 1552
CviAII CATG 8 cut(s) 440, 792, 1271, 1280, 1328, 1387, 1474, 1483
CviQI GTAC 4 cut(s) 650, 745, 826, 1552
DdeI CTNAG 7 cut(s) 267, 299, 653, 684, 783, 932, 1596
DpnI GATC 8 cut(s) 392, 658, 740, 1379, 1481, 1610, 1643, 1649
DpnII GATC 8 cut(s) 390, 656, 738, 1377, 1479, 1608, 1641, 1647
DraI TTTAAA 1 cut(s) 636
DraIII CACNNNGTG 1 cut(s) 73
EaeI YGGCCR 2 cut(s) 833, 1146
Eam1104I CTCTTC 5 cut(s) 167, 191, 1283, 1398, 1577
EarI CTCTTC 5 cut(s) 167, 191, 1283, 1398, 1577
Eco130I CCWWGG 1 cut(s) 836
Eco24I GRGCYC 2 cut(s) 784, 1591
Eco31I GGTCTC 1 cut(s) 1172
Eco32I GATATC 1 cut(s) 1299
Eco47I GGWCC 4 cut(s) 256, 813, 1102, 1690
Eco57I CTGAAG 1 cut(s) 728
EcoNI CCTNNNNNAGG 1 cut(s) 561
EcoO109I RGGNCCY 1 cut(s) 1102
EcoRI GAATTC 1 cut(s) 1718
EcoRII CCWGG 3 cut(s) 944, 954, 1447
EcoRV GATATC 1 cut(s) 1299
EcoT14I CCWWGG 1 cut(s) 836
EcoT38I GRGCYC 2 cut(s) 784, 1591
ErhI CCWWGG 1 cut(s) 836
Esp3I CGTCTC 2 cut(s) 1037, 1277
FaeI CATG 8 cut(s) 443, 795, 1274, 1283, 1331, 1390, 1477, 1486
FalI AAGNNNNNCTT 2 cut(s) 1353, 1385
FaqI GGGAC 3 cut(s) 238, 826, 1290
FatI CATG 8 cut(s) 439, 791, 1270, 1279, 1327, 1386, 1473, 1482
FauI CCCGC 1 cut(s) 1509
FbaI TGATCA 2 cut(s) 390, 738
FblI GTMKAC 1 cut(s) 321
Fnu4HI GCNGC 5 cut(s) 284, 628, 869, 1266, 1616
FokI GGATG 1 cut(s) 923
FriOI GRGCYC 2 cut(s) 784, 1591
Fsp4HI GCNGC 5 cut(s) 284, 628, 869, 1266, 1616
FspBI CTAG 3 cut(s) 725, 1076, 1605
GluI GCNGC 5 cut(s) 284, 628, 869, 1266, 1616
GsuI CTGGAG 1 cut(s) 331
HaeIII GGCC 2 cut(s) 835, 1148
HapII CCGG 2 cut(s) 698, 1694
HgaI GACGC 2 cut(s) 332, 722
Hin1II CATG 8 cut(s) 443, 795, 1274, 1283, 1331, 1390, 1477, 1486
HincII GTYRAC 1 cut(s) 1660
HindII GTYRAC 1 cut(s) 1660
HindIII AAGCTT 1 cut(s) 934
HinfI GANTC 5 cut(s) 58, 64, 611, 844, 941
HpaII CCGG 2 cut(s) 698, 1694
HphI GGTGA 8 cut(s) 85, 395, 515, 542, 760, 931, 1052, 1306
Hpy166II GTNNAC 6 cut(s) 76, 294, 322, 583, 1384, 1660
Hpy188I TCNGA 6 cut(s) 39, 63, 661, 786, 849, 1703
Hpy8I GTNNAC 6 cut(s) 76, 294, 322, 583, 1384, 1660
Hpy99I CGWCG 2 cut(s) 196, 1154
HpyCH4III ACNGT 1 cut(s) 192
HpyCH4IV ACGT 2 cut(s) 743, 758
HpyCH4V TGCA 5 cut(s) 13, 294, 871, 1265, 1736
HpyF10VI GCNNNNNNNGC 5 cut(s) 436, 933, 965, 1081, 1529
HpyF3I CTNAG 7 cut(s) 267, 299, 653, 684, 783, 932, 1596
HpySE526I ACGT 2 cut(s) 743, 758
Hsp92II CATG 8 cut(s) 443, 795, 1274, 1283, 1331, 1390, 1477, 1486
KroI GCCGGC 1 cut(s) 697
KroNI GCCGGC 1 cut(s) 699
Ksp22I TGATCA 2 cut(s) 390, 738
Kzo9I GATC 8 cut(s) 390, 656, 738, 1377, 1479, 1608, 1641, 1647
LmnI GCTCC 1 cut(s) 1235
Lsp1109I GCAGC 4 cut(s) 295, 639, 855, 1277
LweI GCATC 1 cut(s) 16
MaeI CTAG 3 cut(s) 725, 1076, 1605
MaeII ACGT 2 cut(s) 743, 758
MalI GATC 8 cut(s) 392, 658, 740, 1379, 1481, 1610, 1643, 1649
MboI GATC 8 cut(s) 390, 656, 738, 1377, 1479, 1608, 1641, 1647
MfeI CAATTG 2 cut(s) 490, 829
MflI RGATCY 1 cut(s) 656
MhlI GDGCHC 5 cut(s) 296, 784, 929, 1447, 1591
MlsI TGGCCA 1 cut(s) 835
MluCI AATT 9 cut(s) 148, 360, 490, 519, 618, 807, 829, 1035, 1718
MluNI TGGCCA 1 cut(s) 835
MlyI GAGTC 2 cut(s) 605, 935
Mox20I TGGCCA 1 cut(s) 835
MroNI GCCGGC 1 cut(s) 697
MroXI GAANNNNTTC 1 cut(s) 1176
MscI TGGCCA 1 cut(s) 835
MseI TTAA 3 cut(s) 435, 635, 1161
Msp20I TGGCCA 1 cut(s) 835
MspI CCGG 2 cut(s) 698, 1694
MspR9I CCNGG 4 cut(s) 946, 956, 1449, 1694
MunI CAATTG 2 cut(s) 490, 829
Mva1269I GAATGC 1 cut(s) 1414
MvaI CCWGG 3 cut(s) 946, 956, 1449
MwoI GCNNNNNNNGC 5 cut(s) 436, 933, 965, 1081, 1529
NaeI GCCGGC 1 cut(s) 699
NciI CCSGG 1 cut(s) 1694
NdeII GATC 8 cut(s) 390, 656, 738, 1377, 1479, 1608, 1641, 1647
NgoMIV GCCGGC 1 cut(s) 697
NheI GCTAGC 1 cut(s) 724
NlaIII CATG 8 cut(s) 443, 795, 1274, 1283, 1331, 1390, 1477, 1486
NlaIV GGNNCC 6 cut(s) 36, 814, 928, 951, 1444, 1692
PcsI WCGNNNNNNNCGW 1 cut(s) 1560
PctI GAATGC 1 cut(s) 1414
PdiI GCCGGC 1 cut(s) 699
PdmI GAANNNNTTC 1 cut(s) 1176
PfeI GAWTC 3 cut(s) 58, 64, 844
PflMI CCANNNNNTGG 2 cut(s) 623, 1232
PkrI GCNGC 5 cut(s) 285, 629, 870, 1267, 1617
PleI GAGTC 2 cut(s) 605, 935
PpsI GAGTC 2 cut(s) 605, 935
Ppu21I YACGTR 1 cut(s) 744
PpuMI RGGWCCY 1 cut(s) 1102
Psp5II RGGWCCY 1 cut(s) 1102
Psp6I CCWGG 3 cut(s) 944, 954, 1447
PspGI CCWGG 3 cut(s) 944, 954, 1447
PspN4I GGNNCC 6 cut(s) 36, 814, 928, 951, 1444, 1692
PspPI GGNCC 4 cut(s) 256, 813, 1102, 1690
PspPPI RGGWCCY 1 cut(s) 1102
PstI CTGCAG 1 cut(s) 15
PsuI RGATCY 1 cut(s) 656
RsaI GTAC 4 cut(s) 651, 746, 827, 1553
RsaNI GTAC 4 cut(s) 650, 745, 826, 1552
SaqAI TTAA 3 cut(s) 435, 635, 1161
SatI GCNGC 5 cut(s) 284, 628, 869, 1266, 1616
Sau3AI GATC 8 cut(s) 390, 656, 738, 1377, 1479, 1608, 1641, 1647
Sau96I GGNCC 4 cut(s) 256, 813, 1102, 1690
SchI GAGTC 2 cut(s) 605, 935
ScrFI CCNGG 4 cut(s) 946, 956, 1449, 1694
SduI GDGCHC 5 cut(s) 296, 784, 929, 1447, 1591
SfaNI GCATC 1 cut(s) 16
SfcI CTRYAG 2 cut(s) 11, 1488
SinI GGWCC 4 cut(s) 256, 813, 1102, 1690
Sse9I AATT 9 cut(s) 148, 360, 490, 519, 618, 807, 829, 1035, 1718
SsiI CCGC 3 cut(s) 1412, 1516, 1616
SspMI CTAG 3 cut(s) 725, 1076, 1605
StyD4I CCNGG 4 cut(s) 944, 954, 1447, 1692
StyI CCWWGG 1 cut(s) 836
TaaI ACNGT 1 cut(s) 192
TaiI ACGT 2 cut(s) 746, 761
TaqI TCGA 5 cut(s) 50, 194, 474, 939, 1170
TasI AATT 9 cut(s) 148, 360, 490, 519, 618, 807, 829, 1035, 1718
TatI WGTACW 2 cut(s) 649, 825
TauI GCSGC 1 cut(s) 1618
TfiI GAWTC 3 cut(s) 58, 64, 844
Tru1I TTAA 3 cut(s) 435, 635, 1161
Tru9I TTAA 3 cut(s) 435, 635, 1161
TscAI CASTG 1 cut(s) 1024
TseI GCWGC 4 cut(s) 283, 627, 868, 1265
TspDTI ATGAA 3 cut(s) 17, 456, 1416
TspGWI ACGGA 1 cut(s) 733
TspRI CASTG 1 cut(s) 1024
Van91I CCANNNNNTGG 2 cut(s) 623, 1232
VneI GTGCAC 1 cut(s) 292
VpaK11BI GGWCC 4 cut(s) 256, 813, 1102, 1690
XagI CCTNNNNNAGG 1 cut(s) 561
XapI RAATTY 2 cut(s) 360, 1718
XcmI CCANNNNNNNNNTGG 1 cut(s) 1340
XmiI GTMKAC 1 cut(s) 321
XmnI GAANNNNTTC 1 cut(s) 1176
XspI CTAG 3 cut(s) 725, 1076, 1605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.