Rmu_sc0010546.1_g000007

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010546.1
OG0000060
Physical Location & Seq
Reverse (-)
13268 .. 15101
1834 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010546.1_g000007.1.cds

Sequence Viewer

Length: 1293 bp
atggtcaacgcacacaaagacagaataccagaccaaacgaaagagattttgatgggtaccacctttggtgaaatgatggaacctttctggcaggacaagataacagagagccagctgcacaaacatgaagcggacctggagatactcctaaggcacttcgaccataccgacaacaaatggaagtttggggatattgttatggaaataacggaagaggatgtcacggctttgtttcacctcccggctgaaggagaagtgttcaatgtgaacaggagggtggtaagggaagagatggaagactctccaatatttgggagccctttaaagacgcaggctgtcctcagaacaagggtggagtcgacactgatagatgagttgacgaagccggcagaagagaaagatgccaggaagatagccatgctaatgatgacatatctattcagcacattcttcttcacccgaaccggtgcccagatcacttgggatatggtcgcgatatgtgaaaggattgagactataaacatatacaattggccaagattaattctgaacttcttgatggaagggttacaaaagtataggaggaacagtccatctgttttgaatggatgccttcttctcatctattactggttccttgagaagaccaaggcaaagacctggattcctggaaggcagaatgagactccgcgattcatccgatggtcaataaaggaaatttttagcctggagcagctgtacatgaacgagaacttacccgtggatctgataaaggctggaccatggtctgcaaaaattagactggaagacctcgagctgggtgatgaggtgcaggacacaccgagctttgacaactgggtaccactggcaagccaagcagaagagcgacaaaatgaaaggctgaaggggaatatcaaggaactaattagggagatggaggaagccattggtgagacaaagcccacaaaagaaatggaggtgaagttagcaaggcttgccaaagcaaatgaggacctgactgcacagaacaaggatttatggggaaagcttagggttgccgacgagagaattagggagttggaaattgaaaaacgggccaaaaataacctcatcagggcgctgtacatacggcttgaaagggagaaaggagaggtccccccacctcaaacccaacttgagatagttcctttcaagcaaggtgtggtccaccatgatgaagttgaggatgaaaatccaaactttggaccgagcgtcggagaggaaacccatcatgcagctagtgcgggaaagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

430

Amino Acids

50.14

Weight (kDa)

5.25

Isoelectric Point (pI)

42.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 56, 859
AccB1I GGYRCC 3 cut(s) 56, 467, 859
AccB7I CCANNNNNTGG 2 cut(s) 311, 1241
AccI GTMKAC 1 cut(s) 359
AccII CGCG 2 cut(s) 494, 691
AciI CCGC 3 cut(s) 131, 689, 1283
AclWI GGATC 1 cut(s) 771
AcoI YGGCCR 1 cut(s) 533
AcsI RAATTY 1 cut(s) 717
AcuI CTGAAG 2 cut(s) 267, 923
AfaI GTAC 4 cut(s) 58, 740, 861, 1124
AfiI CCNNNNNNNGG 6 cut(s) 248, 311, 817, 1114, 1241, 1253
AgeI ACCGGT 1 cut(s) 464
AgsI TTSAA 5 cut(s) 262, 604, 1088, 1136, 1192
AhdI GACNNNNNGTC 1 cut(s) 1250
AjnI CCWGG 5 cut(s) 135, 404, 659, 667, 726
AluBI AGCT 6 cut(s) 115, 736, 817, 846, 1048, 1277
AluI AGCT 6 cut(s) 115, 736, 817, 846, 1048, 1277
Alw26I GTCTC 3 cut(s) 506, 677, 947
AlwI GGATC 1 cut(s) 771
Ama87I CYCGRG 1 cut(s) 812
AoxI GGCC 2 cut(s) 533, 1095
ApeKI GCWGC 3 cut(s) 115, 733, 1274
ApoI RAATTY 1 cut(s) 717
AseI ATTAAT 1 cut(s) 542
AsiGI ACCGGT 1 cut(s) 464
Asp718I GGTACC 2 cut(s) 56, 859
AspLEI GCGC 1 cut(s) 1120
AspS9I GGNCC 7 cut(s) 133, 779, 1012, 1095, 1153, 1204, 1244
AsuC2I CCSGG 1 cut(s) 242
AsuHPI GGTGA 6 cut(s) 80, 227, 448, 833, 962, 991
AvaI CYCGRG 1 cut(s) 812
AvaII GGWCC 6 cut(s) 133, 779, 1012, 1153, 1204, 1244
AxyI CCTNAGG 1 cut(s) 149
BaeGI GKGCMC 1 cut(s) 472
BalI TGGCCA 1 cut(s) 535
BanI GGYRCC 3 cut(s) 56, 467, 859
BanII GRGCYC 1 cut(s) 320
BbsI GAAGAC 3 cut(s) 303, 650, 813
BbvI GCAGC 3 cut(s) 102, 745, 1286
BccI CCATC 8 cut(s) 46, 70, 286, 553, 601, 696, 928, 1275
BceAI ACGGC 2 cut(s) 240, 1145
BciT130I CCWGG 5 cut(s) 137, 406, 661, 669, 728
BcnI CCSGG 1 cut(s) 242
BcoDI GTCTC 3 cut(s) 506, 677, 947
BfaI CTAG 1 cut(s) 1278
BfoI RGCGCY 1 cut(s) 1121
BisI GCNGC 3 cut(s) 116, 734, 1275
BlsI GCNGC 3 cut(s) 117, 735, 1276
Bme1390I CCNGG 6 cut(s) 137, 242, 406, 661, 669, 728
Bme18I GGWCC 6 cut(s) 133, 779, 1012, 1153, 1204, 1244
BmeRI GACNNNNNGTC 1 cut(s) 1250
BmeT110I CYCGRG 1 cut(s) 812
BmgT120I GGNCC 7 cut(s) 133, 779, 1012, 1095, 1153, 1204, 1244
BmiI GGNNCC 7 cut(s) 58, 81, 317, 469, 635, 861, 1155
BmrFI CCNGG 6 cut(s) 137, 242, 406, 661, 669, 728
BmrI ACTGGG 1 cut(s) 865
BmsI GCATC 2 cut(s) 391, 599
BmuI ACTGGG 1 cut(s) 865
BoxI GACNNNNGTC 1 cut(s) 784
BpiI GAAGAC 3 cut(s) 303, 650, 813
BpmI CTGGAG 2 cut(s) 158, 749
Bpu10I CCTNAGC 1 cut(s) 1049
BpuEI CTTGAG 2 cut(s) 659, 1196
BpuMI CCSGG 1 cut(s) 242
BsaBI GATNNNNATC 1 cut(s) 1230
BsaJI CCNNGG 3 cut(s) 648, 759, 782
BsaWI WCCGGW 1 cut(s) 464
BsaXI ACNNNNNCTCC 6 cut(s) 574, 604, 722, 752, 968, 998
Bsc4I CCNNNNNNNGG 6 cut(s) 248, 311, 817, 1114, 1241, 1253
Bse118I RCCGGY 2 cut(s) 385, 464
Bse1I ACTGG 4 cut(s) 635, 807, 860, 870
Bse21I CCTNAGG 1 cut(s) 149
Bse8I GATNNNNATC 1 cut(s) 1230
BseBI CCWGG 5 cut(s) 137, 406, 661, 669, 728
BseDI CCNNGG 3 cut(s) 648, 759, 782
BseGI GGATG 4 cut(s) 223, 614, 696, 1231
BseJI GATNNNNATC 1 cut(s) 1230
BseLI CCNNNNNNNGG 6 cut(s) 248, 311, 817, 1114, 1241, 1253
BseMII CTCAG 1 cut(s) 355
BseNI ACTGG 4 cut(s) 635, 807, 860, 870
BseSI GKGCMC 1 cut(s) 472
BseXI GCAGC 3 cut(s) 102, 745, 1286
BseYI CCCAGC 1 cut(s) 817
BsgI GTGCAG 3 cut(s) 101, 851, 1005
Bsh1236I CGCG 2 cut(s) 494, 691
BshFI GGCC 2 cut(s) 535, 1097
BshNI GGYRCC 3 cut(s) 56, 467, 859
BshTI ACCGGT 1 cut(s) 464
BsiHKCI CYCGRG 1 cut(s) 812
BsiSI CCGG 3 cut(s) 242, 386, 465
BslFI GGGAC 1 cut(s) 1139
BslI CCNNNNNNNGG 6 cut(s) 248, 311, 817, 1114, 1241, 1253
BsmAI GTCTC 3 cut(s) 506, 677, 947
BsmFI GGGAC 1 cut(s) 1139
BsnI GGCC 2 cut(s) 535, 1097
BsoBI CYCGRG 1 cut(s) 812
Bsp1286I GDGCHC 2 cut(s) 320, 472
Bsp1407I TGTACA 2 cut(s) 738, 1122
Bsp143I GATC 2 cut(s) 474, 763
Bsp19I CCATGG 1 cut(s) 782
Bsp68I TCGCGA 1 cut(s) 494
BspACI CCGC 3 cut(s) 131, 689, 1283
BspANI GGCC 2 cut(s) 535, 1097
BspCNI CTCAG 1 cut(s) 354
BspFNI CGCG 2 cut(s) 494, 691
BspLI GGNNCC 7 cut(s) 58, 81, 317, 469, 635, 861, 1155
BspPI GGATC 1 cut(s) 771
BspQI GCTCTTC 1 cut(s) 876
BspT107I GGYRCC 3 cut(s) 56, 467, 859
BsrFI RCCGGY 2 cut(s) 385, 464
BsrGI TGTACA 2 cut(s) 738, 1122
BsrI ACTGG 4 cut(s) 635, 807, 860, 870
BssAI RCCGGY 2 cut(s) 385, 464
BssECI CCNNGG 3 cut(s) 648, 759, 782
BssMI GATC 2 cut(s) 474, 763
BssT1I CCWWGG 2 cut(s) 648, 782
Bst2UI CCWGG 5 cut(s) 137, 406, 661, 669, 728
Bst4CI ACNGT 1 cut(s) 590
Bst6I CTCTTC 4 cut(s) 207, 282, 387, 876
BstAPI GCANNNNNTGC 2 cut(s) 995, 1280
BstAUI TGTACA 2 cut(s) 738, 1122
BstC8I GCNNGC 5 cut(s) 113, 333, 387, 871, 996
BstDEI CTNAG 3 cut(s) 149, 341, 1049
BstDSI CCRYGG 2 cut(s) 759, 782
BstF5I GGATG 4 cut(s) 223, 614, 696, 1231
BstFNI CGCG 2 cut(s) 494, 691
BstH2I RGCGCY 1 cut(s) 1121
BstHHI GCGC 1 cut(s) 1120
BstKTI GATC 2 cut(s) 477, 766
BstMAI GTCTC 3 cut(s) 506, 677, 947
BstMBI GATC 2 cut(s) 474, 763
BstMWI GCNNNNNNNGC 3 cut(s) 875, 995, 1280
BstNI CCWGG 5 cut(s) 137, 406, 661, 669, 728
BstPAI GACNNNNGTC 1 cut(s) 784
BstSCI CCNGG 6 cut(s) 135, 240, 404, 659, 667, 726
BstSLI GKGCMC 1 cut(s) 472
BstUI CGCG 2 cut(s) 494, 691
BstV1I GCAGC 3 cut(s) 102, 745, 1286
BstV2I GAAGAC 3 cut(s) 303, 650, 813
BstX2I RGATCY 1 cut(s) 763
BstYI RGATCY 1 cut(s) 763
Bsu36I CCTNAGG 1 cut(s) 149
BsuRI GGCC 2 cut(s) 535, 1097
BtgI CCRYGG 2 cut(s) 759, 782
BtsCI GGATG 4 cut(s) 223, 614, 696, 1231
BtsIMutI CAGTG 2 cut(s) 362, 863
BtuMI TCGCGA 1 cut(s) 494
Cac8I GCNNGC 5 cut(s) 113, 333, 387, 871, 996
CfoI GCGC 1 cut(s) 1120
Cfr10I RCCGGY 2 cut(s) 385, 464
Cfr13I GGNCC 7 cut(s) 133, 779, 1012, 1095, 1153, 1204, 1244
CseI GACGC 2 cut(s) 337, 1240
Csp6I GTAC 4 cut(s) 57, 739, 860, 1123
CspAI ACCGGT 1 cut(s) 464
CviAII CATG 6 cut(s) 125, 418, 742, 783, 1211, 1271
CviQI GTAC 4 cut(s) 57, 739, 860, 1123
DdeI CTNAG 3 cut(s) 149, 341, 1049
DpnI GATC 2 cut(s) 476, 765
DpnII GATC 2 cut(s) 474, 763
DraI TTTAAA 1 cut(s) 324
DriI GACNNNNNGTC 1 cut(s) 1250
EaeI YGGCCR 1 cut(s) 533
Eam1104I CTCTTC 4 cut(s) 207, 282, 387, 876
Eam1105I GACNNNNNGTC 1 cut(s) 1250
EarI CTCTTC 4 cut(s) 207, 282, 387, 876
Eco130I CCWWGG 2 cut(s) 648, 782
Eco24I GRGCYC 1 cut(s) 320
Eco47I GGWCC 6 cut(s) 133, 779, 1012, 1153, 1204, 1244
Eco57I CTGAAG 2 cut(s) 267, 923
Eco81I CCTNAGG 1 cut(s) 149
Eco88I CYCGRG 1 cut(s) 812
EcoO109I RGGNCCY 2 cut(s) 1012, 1153
EcoRII CCWGG 5 cut(s) 135, 404, 659, 667, 726
EcoT14I CCWWGG 2 cut(s) 648, 782
EcoT38I GRGCYC 1 cut(s) 320
ErhI CCWWGG 2 cut(s) 648, 782
FaeI CATG 6 cut(s) 128, 421, 745, 786, 1214, 1274
FaqI GGGAC 1 cut(s) 1139
FatI CATG 6 cut(s) 124, 417, 741, 782, 1210, 1270
FauI CCCGC 1 cut(s) 1276
FblI GTMKAC 1 cut(s) 359
Fnu4HI GCNGC 3 cut(s) 116, 734, 1275
FokI GGATG 4 cut(s) 230, 621, 683, 1238
FriOI GRGCYC 1 cut(s) 320
Fsp4HI GCNGC 3 cut(s) 116, 734, 1275
FspBI CTAG 1 cut(s) 1278
GlaI GCGC 1 cut(s) 1119
GluI GCNGC 3 cut(s) 116, 734, 1275
GsaI CCCAGC 1 cut(s) 821
GsuI CTGGAG 2 cut(s) 158, 749
HaeII RGCGCY 1 cut(s) 1121
HaeIII GGCC 2 cut(s) 535, 1097
HapII CCGG 3 cut(s) 242, 386, 465
HgaI GACGC 2 cut(s) 337, 1240
HhaI GCGC 1 cut(s) 1120
Hin1II CATG 6 cut(s) 128, 421, 745, 786, 1214, 1274
Hin6I GCGC 1 cut(s) 1118
HinP1I GCGC 1 cut(s) 1118
HincII GTYRAC 3 cut(s) 7, 360, 378
HindII GTYRAC 3 cut(s) 7, 360, 378
HindIII AAGCTT 1 cut(s) 1046
HinfI GANTC 5 cut(s) 299, 356, 664, 685, 693
HpaII CCGG 3 cut(s) 242, 386, 465
HphI GGTGA 6 cut(s) 80, 227, 448, 833, 962, 991
Hpy166II GTNNAC 5 cut(s) 7, 268, 360, 378, 1207
Hpy188I TCNGA 5 cut(s) 344, 549, 701, 768, 1256
Hpy188III TCNNGA 2 cut(s) 493, 556
Hpy8I GTNNAC 5 cut(s) 7, 268, 360, 378, 1207
Hpy99I CGWCG 2 cut(s) 1064, 1256
HpyAV CCTTC 5 cut(s) 242, 557, 623, 666, 898
HpyCH4III ACNGT 1 cut(s) 590
HpyCH4V TGCA 5 cut(s) 118, 791, 832, 1022, 1274
HpyF10VI GCNNNNNNNGC 3 cut(s) 875, 995, 1280
HpyF3I CTNAG 3 cut(s) 149, 341, 1049
Hsp92II CATG 6 cut(s) 128, 421, 745, 786, 1214, 1274
HspAI GCGC 1 cut(s) 1118
KpnI GGTACC 2 cut(s) 60, 863
KroI GCCGGC 1 cut(s) 385
KroNI GCCGGC 1 cut(s) 387
Kzo9I GATC 2 cut(s) 474, 763
LguI GCTCTTC 1 cut(s) 876
LmnI GCTCC 2 cut(s) 315, 730
Lsp1109I GCAGC 3 cut(s) 102, 745, 1286
LweI GCATC 2 cut(s) 391, 599
MaeI CTAG 1 cut(s) 1278
MaeIII GTNAC 2 cut(s) 220, 567
MalI GATC 2 cut(s) 476, 765
MboI GATC 2 cut(s) 474, 763
MfeI CAATTG 1 cut(s) 529
MflI RGATCY 1 cut(s) 763
MhlI GDGCHC 2 cut(s) 320, 472
MlsI TGGCCA 1 cut(s) 535
MluCI AATT 7 cut(s) 529, 543, 717, 795, 924, 1068, 1083
MluNI TGGCCA 1 cut(s) 535
MlyI GAGTC 3 cut(s) 293, 365, 679
MmeI TCCRAC 2 cut(s) 1059, 1234
Mox20I TGGCCA 1 cut(s) 535
MroNI GCCGGC 1 cut(s) 385
MscI TGGCCA 1 cut(s) 535
MseI TTAA 2 cut(s) 323, 542
MslI CAYNNNNRTG 3 cut(s) 123, 422, 1212
Msp20I TGGCCA 1 cut(s) 535
MspA1I CMGCKG 2 cut(s) 115, 736
MspI CCGG 3 cut(s) 242, 386, 465
MspR9I CCNGG 6 cut(s) 137, 242, 406, 661, 669, 728
MunI CAATTG 1 cut(s) 529
MvaI CCWGG 5 cut(s) 137, 406, 661, 669, 728
MvnI CGCG 2 cut(s) 494, 691
MwoI GCNNNNNNNGC 3 cut(s) 875, 995, 1280
NaeI GCCGGC 1 cut(s) 387
NciI CCSGG 1 cut(s) 242
NcoI CCATGG 1 cut(s) 782
NdeII GATC 2 cut(s) 474, 763
NgoMIV GCCGGC 1 cut(s) 385
NlaIII CATG 6 cut(s) 128, 421, 745, 786, 1214, 1274
NlaIV GGNNCC 7 cut(s) 58, 81, 317, 469, 635, 861, 1155
NmuCI GTSAC 1 cut(s) 220
NruI TCGCGA 1 cut(s) 494
PaeR7I CTCGAG 1 cut(s) 812
PciSI GCTCTTC 1 cut(s) 876
PcsI WCGNNNNNNNCGW 1 cut(s) 165
PdiI GCCGGC 1 cut(s) 387
PfeI GAWTC 2 cut(s) 664, 693
PflMI CCANNNNNTGG 2 cut(s) 311, 1241
PfoI TCCNGGA 1 cut(s) 667
PinAI ACCGGT 1 cut(s) 464
PkrI GCNGC 3 cut(s) 117, 735, 1276
PleI GAGTC 3 cut(s) 293, 364, 679
PpsI GAGTC 3 cut(s) 293, 364, 679
PpuMI RGGWCCY 2 cut(s) 1012, 1153
PshAI GACNNNNGTC 1 cut(s) 784
PshBI ATTAAT 1 cut(s) 542
Psp5II RGGWCCY 2 cut(s) 1012, 1153
Psp6I CCWGG 5 cut(s) 135, 404, 659, 667, 726
PspFI CCCAGC 1 cut(s) 817
PspGI CCWGG 5 cut(s) 135, 404, 659, 667, 726
PspN4I GGNNCC 7 cut(s) 58, 81, 317, 469, 635, 861, 1155
PspPI GGNCC 7 cut(s) 133, 779, 1012, 1095, 1153, 1204, 1244
PspPPI RGGWCCY 2 cut(s) 1012, 1153
PspXI VCTCGAGB 1 cut(s) 812
PsuI RGATCY 1 cut(s) 763
PvuII CAGCTG 2 cut(s) 115, 736
RruI TCGCGA 1 cut(s) 494
RsaI GTAC 4 cut(s) 58, 740, 861, 1124
RsaNI GTAC 4 cut(s) 57, 739, 860, 1123
RseI CAYNNNNRTG 3 cut(s) 123, 422, 1212
SalI GTCGAC 1 cut(s) 358
SapI GCTCTTC 1 cut(s) 876
SaqAI TTAA 2 cut(s) 323, 542
SatI GCNGC 3 cut(s) 116, 734, 1275
Sau3AI GATC 2 cut(s) 474, 763
Sau96I GGNCC 7 cut(s) 133, 779, 1012, 1095, 1153, 1204, 1244
SchI GAGTC 3 cut(s) 293, 365, 679
ScrFI CCNGG 6 cut(s) 137, 242, 406, 661, 669, 728
SduI GDGCHC 2 cut(s) 320, 472
SfaNI GCATC 2 cut(s) 391, 599
Sfr274I CTCGAG 1 cut(s) 812
SinI GGWCC 6 cut(s) 133, 779, 1012, 1153, 1204, 1244
SlaI CTCGAG 1 cut(s) 812
SmiMI CAYNNNNRTG 3 cut(s) 123, 422, 1212
SmlI CTYRAG 3 cut(s) 638, 812, 1175
SmoI CTYRAG 3 cut(s) 638, 812, 1175
Sse9I AATT 7 cut(s) 529, 543, 717, 795, 924, 1068, 1083
SsiI CCGC 3 cut(s) 131, 689, 1283
SspI AATATT 1 cut(s) 309
SspMI CTAG 1 cut(s) 1278
StyD4I CCNGG 6 cut(s) 135, 240, 404, 659, 667, 726
StyI CCWWGG 2 cut(s) 648, 782
TaaI ACNGT 1 cut(s) 590
TaqI TCGA 3 cut(s) 159, 359, 813
TaqII GACCGA 1 cut(s) 1261
TasI AATT 7 cut(s) 529, 543, 717, 795, 924, 1068, 1083
TatI WGTACW 2 cut(s) 738, 1122
TfiI GAWTC 2 cut(s) 664, 693
Tru1I TTAA 2 cut(s) 323, 542
Tru9I TTAA 2 cut(s) 323, 542
TscAI CASTG 2 cut(s) 369, 870
TseFI GTSAC 1 cut(s) 220
TseI GCWGC 3 cut(s) 115, 733, 1274
Tsp45I GTSAC 1 cut(s) 220
TspDTI ATGAA 6 cut(s) 141, 685, 758, 909, 1230, 1242
TspGWI ACGGA 1 cut(s) 224
TspRI CASTG 2 cut(s) 369, 870
Van91I CCANNNNNTGG 2 cut(s) 311, 1241
VpaK11BI GGWCC 6 cut(s) 133, 779, 1012, 1153, 1204, 1244
VspI ATTAAT 1 cut(s) 542
XapI RAATTY 1 cut(s) 717
XcmI CCANNNNNNNNNTGG 1 cut(s) 970
XhoI CTCGAG 1 cut(s) 812
XmiI GTMKAC 1 cut(s) 359
XspI CTAG 1 cut(s) 1278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.