Rmu_sc0005416.1_g000035

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005416.1
OG0000060
Physical Location & Seq
Forward (+)
159558 .. 161543
1986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005416.1_g000035.1.cds

Sequence Viewer

Length: 1425 bp
atgggtagaccaaaattcaccttgatgagtgactcagaggaagatgaccggaattcacagagttccgataactgtactgaggccacatttaaccaaacactgcaaacaaagtttgtcgaaataagaaagaggacgcgaaaaggggcagcacatatttctgacgaaggatccgctgaagaagaagttaaagaagattcaggccgatcatctgaagaagaatcagaatcagagggtgaacagacaacgaaaaggtttgtaatcaaaacgagaaaacaaccaaaaaggaaacaacttctagaggaagtgggttcagaagacgaaaaaccaaagaagaaagcgaagaagcaagtgaaaaaggcagttaaaaaggaggagcaagctgagacaaagaaagcaaagattgagtggaagcaacagaagtgcacgctcagtgcattctggaggatggtcaacggtcacaaagacagagtaccagaccgaatgaaagagattttgatgggcaccaactttggtgaaatgatggagcctttctggcaggacaagataacagagatccagctgcacaagcatgaagcggacctggagatactcctaaggcacttcgaccgttccgacaacaagtggaagtttggtgatattgttatggaaataacgaaggaggatgtcacggctttgtttcacatccccgctgaaggagaagtgttcaatgtgaacaggagggtggtaagggaagatatggaagactcccctatttttggtagccctttaaagacgcaggctgtcctcagaacaagggtggagtcgacactgatagatgagttgacaaagccagcagaagagaaagatgccaggaagatagccgtgctaatgatgacatatctattcagcacattcttcttcacccgaaccggtgctcagatcacctgggatatggtcgcgatatgtgaacggattgagaccattaacatgtacaattggccaagtttaattctgaacttcttgatggaagggttacagaaatataggaggaacagtccatctgttttgaatggatgccttcttctcatctattactggttccttgagaaaaccaaggcaaagacctggattcctggaagggagaatgagactccacgattcatccgatggtcaataaaggaaatttttagcctggagcagttgtacatgaacgagaacttagctgtggatctgataaaagctggaccatggtctgcaaaaattagactggaagacatcgaactgggtgaagaggtgcaggacacaccaagctttgacaactggataccactggcaagccaagcagaagagcaacaaaatgaaaggctgacggggaatatcaaggaactgattagggagatggaggaagccattggtgacacaaagccggatagccaaagcaaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

474

Amino Acids

55.3

Weight (kDa)

5.59

Isoelectric Point (pI)

56.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 500
AccI GTMKAC 2 cut(s) 7, 803
AccII CGCG 2 cut(s) 136, 938
AciI CCGC 3 cut(s) 171, 575, 687
AclWI GGATC 4 cut(s) 162, 175, 547, 1215
AcoI YGGCCR 1 cut(s) 977
AcsI RAATTY 3 cut(s) 14, 52, 1161
AcuI CTGAAG 3 cut(s) 195, 231, 711
AfaI GTAC 4 cut(s) 76, 471, 971, 1184
AfiI CCNNNNNNNGG 2 cut(s) 692, 755
AflIII ACRYGT 1 cut(s) 966
AgeI ACCGGT 1 cut(s) 908
AgsI TTSAA 2 cut(s) 706, 1048
AjnI CCWGG 6 cut(s) 579, 848, 923, 1103, 1111, 1170
AluBI AGCT 5 cut(s) 380, 559, 1202, 1220, 1290
AluI AGCT 5 cut(s) 380, 559, 1202, 1220, 1290
Alw21I GWGCWC 2 cut(s) 425, 916
Alw26I GTCTC 3 cut(s) 377, 950, 1121
Alw44I GTGCAC 1 cut(s) 421
AlwI GGATC 4 cut(s) 162, 175, 547, 1215
AoxI GGCC 3 cut(s) 81, 199, 977
ApaLI GTGCAC 1 cut(s) 421
ApeKI GCWGC 2 cut(s) 146, 559
ApoI RAATTY 3 cut(s) 14, 52, 1161
AsiGI ACCGGT 1 cut(s) 908
AspS9I GGNCC 2 cut(s) 577, 1223
AsuHPI GGTGA 8 cut(s) 10, 245, 524, 644, 892, 913, 1277, 1406
AvaII GGWCC 2 cut(s) 577, 1223
AxyI CCTNAGG 1 cut(s) 593
BaeGI GKGCMC 2 cut(s) 425, 503
BalI TGGCCA 1 cut(s) 979
BamHI GGATCC 1 cut(s) 167
BanI GGYRCC 1 cut(s) 500
BbsI GAAGAC 3 cut(s) 321, 747, 1257
Bbv12I GWGCWC 2 cut(s) 425, 916
BbvI GCAGC 2 cut(s) 158, 546
BccI CCATC 7 cut(s) 439, 490, 514, 997, 1045, 1140, 1372
BceAI ACGGC 2 cut(s) 684, 845
BciT130I CCWGG 6 cut(s) 581, 850, 925, 1105, 1113, 1172
BciVI GTATCC 1 cut(s) 1296
BcoDI GTCTC 3 cut(s) 377, 950, 1121
BfaI CTAG 1 cut(s) 296
BfuI GTATCC 1 cut(s) 1296
BglI GCCNNNNNGGC 1 cut(s) 532
BisI GCNGC 2 cut(s) 147, 560
BlsI GCNGC 2 cut(s) 148, 561
Bme1390I CCNGG 6 cut(s) 581, 850, 925, 1105, 1113, 1172
Bme18I GGWCC 2 cut(s) 577, 1223
BmgT120I GGNCC 2 cut(s) 577, 1223
BmiI GGNNCC 4 cut(s) 169, 502, 525, 1079
BmrFI CCNGG 6 cut(s) 581, 850, 925, 1105, 1113, 1172
BmrI ACTGGG 1 cut(s) 1271
BmsI GCATC 2 cut(s) 835, 1043
BmuI ACTGGG 1 cut(s) 1271
BoxI GACNNNNGTC 1 cut(s) 1228
BpiI GAAGAC 3 cut(s) 321, 747, 1257
BpmI CTGGAG 3 cut(s) 460, 602, 1193
BpuEI CTTGAG 1 cut(s) 1103
BsaI GGTCTC 1 cut(s) 950
BsaJI CCNNGG 3 cut(s) 924, 1092, 1226
BsaWI WCCGGW 2 cut(s) 48, 908
BsaXI ACNNNNNCTCC 4 cut(s) 1018, 1048, 1166, 1196
Bsc4I CCNNNNNNNGG 2 cut(s) 692, 755
Bse118I RCCGGY 1 cut(s) 908
Bse1I ACTGG 5 cut(s) 1079, 1251, 1266, 1304, 1314
Bse21I CCTNAGG 1 cut(s) 593
BseBI CCWGG 6 cut(s) 581, 850, 925, 1105, 1113, 1172
BseDI CCNNGG 3 cut(s) 924, 1092, 1226
BseGI GGATG 5 cut(s) 450, 667, 681, 1058, 1140
BseLI CCNNNNNNNGG 2 cut(s) 692, 755
BseMII CTCAG 6 cut(s) 48, 69, 372, 442, 799, 929
BseNI ACTGG 5 cut(s) 1079, 1251, 1266, 1304, 1314
BseRI GAGGAG 1 cut(s) 386
BseSI GKGCMC 2 cut(s) 425, 503
BseXI GCAGC 2 cut(s) 158, 546
BsgI GTGCAG 2 cut(s) 545, 1295
Bsh1236I CGCG 2 cut(s) 136, 938
Bsh1285I CGRYCG 1 cut(s) 607
BshFI GGCC 3 cut(s) 83, 201, 979
BshNI GGYRCC 1 cut(s) 500
BshTI ACCGGT 1 cut(s) 908
BsiEI CGRYCG 1 cut(s) 607
BsiHKAI GWGCWC 2 cut(s) 425, 916
BsiSI CCGG 3 cut(s) 49, 909, 1406
BslI CCNNNNNNNGG 2 cut(s) 692, 755
BsmAI GTCTC 3 cut(s) 377, 950, 1121
BsmI GAATGC 1 cut(s) 434
BsnI GGCC 3 cut(s) 83, 201, 979
Bso31I GGTCTC 1 cut(s) 950
Bsp1286I GDGCHC 3 cut(s) 425, 503, 916
Bsp1407I TGTACA 2 cut(s) 969, 1182
Bsp143I GATC 5 cut(s) 167, 203, 552, 918, 1207
Bsp19I CCATGG 1 cut(s) 1226
Bsp68I TCGCGA 1 cut(s) 938
BspACI CCGC 3 cut(s) 171, 575, 687
BspANI GGCC 3 cut(s) 83, 201, 979
BspCNI CTCAG 6 cut(s) 47, 70, 373, 441, 798, 928
BspFNI CGCG 2 cut(s) 136, 938
BspLI GGNNCC 4 cut(s) 169, 502, 525, 1079
BspPI GGATC 4 cut(s) 162, 175, 547, 1215
BspQI GCTCTTC 1 cut(s) 1320
BspT107I GGYRCC 1 cut(s) 500
BspTNI GGTCTC 1 cut(s) 950
BsrFI RCCGGY 1 cut(s) 908
BsrGI TGTACA 2 cut(s) 969, 1182
BsrI ACTGG 5 cut(s) 1079, 1251, 1266, 1304, 1314
BssAI RCCGGY 1 cut(s) 908
BssECI CCNNGG 3 cut(s) 924, 1092, 1226
BssMI GATC 5 cut(s) 167, 203, 552, 918, 1207
BssT1I CCWWGG 2 cut(s) 1092, 1226
Bst2UI CCWGG 6 cut(s) 581, 850, 925, 1105, 1113, 1172
Bst4CI ACNGT 4 cut(s) 74, 455, 608, 1034
Bst6I CTCTTC 3 cut(s) 831, 1263, 1320
BstAUI TGTACA 2 cut(s) 969, 1182
BstC8I GCNNGC 5 cut(s) 378, 425, 777, 831, 1315
BstDEI CTNAG 8 cut(s) 34, 78, 381, 428, 593, 785, 915, 1198
BstDSI CCRYGG 1 cut(s) 1226
BstF5I GGATG 5 cut(s) 450, 667, 681, 1058, 1140
BstFNI CGCG 2 cut(s) 136, 938
BstKTI GATC 5 cut(s) 170, 206, 555, 921, 1210
BstMAI GTCTC 3 cut(s) 377, 950, 1121
BstMBI GATC 5 cut(s) 167, 203, 552, 918, 1207
BstMCI CGRYCG 1 cut(s) 607
BstMWI GCNNNNNNNGC 3 cut(s) 532, 565, 1319
BstNI CCWGG 6 cut(s) 581, 850, 925, 1105, 1113, 1172
BstNSI RCATGY 1 cut(s) 970
BstPAI GACNNNNGTC 1 cut(s) 1228
BstSCI CCNGG 6 cut(s) 579, 848, 923, 1103, 1111, 1170
BstSLI GKGCMC 2 cut(s) 425, 503
BstUI CGCG 2 cut(s) 136, 938
BstV1I GCAGC 2 cut(s) 158, 546
BstV2I GAAGAC 3 cut(s) 321, 747, 1257
BstX2I RGATCY 3 cut(s) 167, 552, 1207
BstYI RGATCY 3 cut(s) 167, 552, 1207
Bsu36I CCTNAGG 1 cut(s) 593
BsuI GTATCC 1 cut(s) 1296
BsuRI GGCC 3 cut(s) 83, 201, 979
BtgI CCRYGG 1 cut(s) 1226
BtsCI GGATG 5 cut(s) 450, 667, 681, 1058, 1140
BtsI GCAGTG 1 cut(s) 98
BtsIMutI CAGTG 4 cut(s) 98, 436, 806, 1307
BtuMI TCGCGA 1 cut(s) 938
Cac8I GCNNGC 5 cut(s) 378, 425, 777, 831, 1315
Cfr10I RCCGGY 1 cut(s) 908
Cfr13I GGNCC 2 cut(s) 577, 1223
CseI GACGC 2 cut(s) 142, 781
Csp6I GTAC 4 cut(s) 75, 470, 970, 1183
CspAI ACCGGT 1 cut(s) 908
CviAII CATG 4 cut(s) 569, 967, 1186, 1227
CviQI GTAC 4 cut(s) 75, 470, 970, 1183
DdeI CTNAG 8 cut(s) 34, 78, 381, 428, 593, 785, 915, 1198
DpnI GATC 5 cut(s) 169, 205, 554, 920, 1209
DpnII GATC 5 cut(s) 167, 203, 552, 918, 1207
DraI TTTAAA 1 cut(s) 768
EaeI YGGCCR 1 cut(s) 977
Eam1104I CTCTTC 3 cut(s) 831, 1263, 1320
EarI CTCTTC 3 cut(s) 831, 1263, 1320
Eco130I CCWWGG 2 cut(s) 1092, 1226
Eco31I GGTCTC 1 cut(s) 950
Eco47I GGWCC 2 cut(s) 577, 1223
Eco57I CTGAAG 3 cut(s) 195, 231, 711
Eco81I CCTNAGG 1 cut(s) 593
EcoRI GAATTC 1 cut(s) 52
EcoRII CCWGG 6 cut(s) 579, 848, 923, 1103, 1111, 1170
EcoT14I CCWWGG 2 cut(s) 1092, 1226
ErhI CCWWGG 2 cut(s) 1092, 1226
FaeI CATG 4 cut(s) 572, 970, 1189, 1230
FatI CATG 4 cut(s) 568, 966, 1185, 1226
FauI CCCGC 1 cut(s) 694
FblI GTMKAC 2 cut(s) 7, 803
Fnu4HI GCNGC 2 cut(s) 147, 560
FokI GGATG 5 cut(s) 457, 668, 674, 1065, 1127
Fsp4HI GCNGC 2 cut(s) 147, 560
FspBI CTAG 1 cut(s) 296
GluI GCNGC 2 cut(s) 147, 560
GsuI CTGGAG 3 cut(s) 460, 602, 1193
HaeIII GGCC 3 cut(s) 83, 201, 979
HapII CCGG 3 cut(s) 49, 909, 1406
HgaI GACGC 2 cut(s) 142, 781
Hin1II CATG 4 cut(s) 572, 970, 1189, 1230
HincII GTYRAC 3 cut(s) 451, 804, 822
HindII GTYRAC 3 cut(s) 451, 804, 822
HindIII AAGCTT 1 cut(s) 1288
HinfI GANTC 9 cut(s) 32, 194, 218, 224, 743, 800, 1108, 1129, 1137
HpaII CCGG 3 cut(s) 49, 909, 1406
HphI GGTGA 8 cut(s) 10, 245, 524, 644, 892, 913, 1277, 1406
Hpy166II GTNNAC 8 cut(s) 8, 236, 423, 451, 712, 804, 822, 947
Hpy188III TCNNGA 4 cut(s) 296, 439, 937, 1000
Hpy8I GTNNAC 8 cut(s) 8, 236, 423, 451, 712, 804, 822, 947
HpyAV CCTTC 6 cut(s) 158, 649, 686, 1001, 1067, 1110
HpyCH4III ACNGT 4 cut(s) 74, 455, 608, 1034
HpyCH4V TGCA 6 cut(s) 103, 423, 434, 562, 1235, 1276
HpyF10VI GCNNNNNNNGC 3 cut(s) 532, 565, 1319
HpyF3I CTNAG 8 cut(s) 34, 78, 381, 428, 593, 785, 915, 1198
Hsp92II CATG 4 cut(s) 572, 970, 1189, 1230
Kzo9I GATC 5 cut(s) 167, 203, 552, 918, 1207
LguI GCTCTTC 1 cut(s) 1320
LmnI GCTCC 3 cut(s) 373, 523, 1174
Lsp1109I GCAGC 2 cut(s) 158, 546
LweI GCATC 2 cut(s) 835, 1043
MaeI CTAG 1 cut(s) 296
MaeIII GTNAC 5 cut(s) 29, 455, 664, 1011, 1394
MalI GATC 5 cut(s) 169, 205, 554, 920, 1209
MboI GATC 5 cut(s) 167, 203, 552, 918, 1207
MfeI CAATTG 1 cut(s) 973
MflI RGATCY 3 cut(s) 167, 552, 1207
MhlI GDGCHC 3 cut(s) 425, 503, 916
MlsI TGGCCA 1 cut(s) 979
MluCI AATT 6 cut(s) 14, 52, 973, 987, 1161, 1239
MluNI TGGCCA 1 cut(s) 979
MlyI GAGTC 4 cut(s) 26, 737, 809, 1123
MmeI TCCRAC 1 cut(s) 636
Mox20I TGGCCA 1 cut(s) 979
MscI TGGCCA 1 cut(s) 979
MseI TTAA 6 cut(s) 90, 186, 363, 767, 963, 986
MslI CAYNNNNRTG 3 cut(s) 23, 567, 965
Msp20I TGGCCA 1 cut(s) 979
MspA1I CMGCKG 3 cut(s) 173, 559, 689
MspI CCGG 3 cut(s) 49, 909, 1406
MspR9I CCNGG 6 cut(s) 581, 850, 925, 1105, 1113, 1172
MunI CAATTG 1 cut(s) 973
Mva1269I GAATGC 1 cut(s) 434
MvaI CCWGG 6 cut(s) 581, 850, 925, 1105, 1113, 1172
MvnI CGCG 2 cut(s) 136, 938
MwoI GCNNNNNNNGC 3 cut(s) 532, 565, 1319
NcoI CCATGG 1 cut(s) 1226
NdeII GATC 5 cut(s) 167, 203, 552, 918, 1207
NlaIII CATG 4 cut(s) 572, 970, 1189, 1230
NlaIV GGNNCC 4 cut(s) 169, 502, 525, 1079
NmuCI GTSAC 4 cut(s) 29, 455, 664, 1394
NruI TCGCGA 1 cut(s) 938
NspI RCATGY 1 cut(s) 970
PciI ACATGT 1 cut(s) 966
PciSI GCTCTTC 1 cut(s) 1320
PcsI WCGNNNNNNNCGW 2 cut(s) 609, 1141
PctI GAATGC 1 cut(s) 434
PfeI GAWTC 5 cut(s) 194, 218, 224, 1108, 1137
PfoI TCCNGGA 1 cut(s) 1111
PinAI ACCGGT 1 cut(s) 908
PkrI GCNGC 2 cut(s) 148, 561
PleI GAGTC 4 cut(s) 26, 737, 808, 1123
PpsI GAGTC 4 cut(s) 26, 737, 808, 1123
PscI ACATGT 1 cut(s) 966
PshAI GACNNNNGTC 1 cut(s) 1228
Psp6I CCWGG 6 cut(s) 579, 848, 923, 1103, 1111, 1170
PspGI CCWGG 6 cut(s) 579, 848, 923, 1103, 1111, 1170
PspN4I GGNNCC 4 cut(s) 169, 502, 525, 1079
PspPI GGNCC 2 cut(s) 577, 1223
PsuI RGATCY 3 cut(s) 167, 552, 1207
PvuII CAGCTG 1 cut(s) 559
RruI TCGCGA 1 cut(s) 938
RsaI GTAC 4 cut(s) 76, 471, 971, 1184
RsaNI GTAC 4 cut(s) 75, 470, 970, 1183
RseI CAYNNNNRTG 3 cut(s) 23, 567, 965
SalI GTCGAC 1 cut(s) 802
SapI GCTCTTC 1 cut(s) 1320
SaqAI TTAA 6 cut(s) 90, 186, 363, 767, 963, 986
SatI GCNGC 2 cut(s) 147, 560
Sau3AI GATC 5 cut(s) 167, 203, 552, 918, 1207
Sau96I GGNCC 2 cut(s) 577, 1223
SchI GAGTC 4 cut(s) 26, 737, 809, 1123
ScrFI CCNGG 6 cut(s) 581, 850, 925, 1105, 1113, 1172
SduI GDGCHC 3 cut(s) 425, 503, 916
SfaNI GCATC 2 cut(s) 835, 1043
SinI GGWCC 2 cut(s) 577, 1223
SmiMI CAYNNNNRTG 3 cut(s) 23, 567, 965
SmlI CTYRAG 1 cut(s) 1082
SmoI CTYRAG 1 cut(s) 1082
Sse9I AATT 6 cut(s) 14, 52, 973, 987, 1161, 1239
SsiI CCGC 3 cut(s) 171, 575, 687
SspMI CTAG 1 cut(s) 296
StyD4I CCNGG 6 cut(s) 579, 848, 923, 1103, 1111, 1170
StyI CCWWGG 2 cut(s) 1092, 1226
TaaI ACNGT 4 cut(s) 74, 455, 608, 1034
TaqI TCGA 4 cut(s) 117, 603, 803, 1257
TaqII GACCGA 1 cut(s) 492
TasI AATT 6 cut(s) 14, 52, 973, 987, 1161, 1239
TatI WGTACW 3 cut(s) 74, 969, 1182
TfiI GAWTC 5 cut(s) 194, 218, 224, 1108, 1137
Tru1I TTAA 6 cut(s) 90, 186, 363, 767, 963, 986
Tru9I TTAA 6 cut(s) 90, 186, 363, 767, 963, 986
TscAI CASTG 4 cut(s) 105, 436, 813, 1314
TseFI GTSAC 4 cut(s) 29, 455, 664, 1394
TseI GCWGC 2 cut(s) 146, 559
Tsp45I GTSAC 4 cut(s) 29, 455, 664, 1394
TspDTI ATGAA 5 cut(s) 497, 585, 1129, 1202, 1353
TspGWI ACGGA 1 cut(s) 964
TspRI CASTG 4 cut(s) 105, 436, 813, 1314
VneI GTGCAC 1 cut(s) 421
VpaK11BI GGWCC 2 cut(s) 577, 1223
XapI RAATTY 3 cut(s) 14, 52, 1161
XbaI TCTAGA 1 cut(s) 295
XceI RCATGY 1 cut(s) 970
XmiI GTMKAC 2 cut(s) 7, 803
XspI CTAG 1 cut(s) 296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.