Rorug06G0501600

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
61638616 .. 61641370
2755 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0501600.1

Sequence Viewer

Length: 1410 bp
ATGGAAGAAGAGCTTCACCAAGCAGCCCTGAAGGGCTCCGTACCTGCTCTCCTCGACCTCCTCAGACAACACCCTCATATCCTCAACGGCACCCCATCTCTCTCCGACACCCCCTTACACGTCGCCGCCATTCTCGGCCACTCCGCCTTCGCCGCCGAGTTACTCACCCGGAGCCCCGAACTCGCCTCCCGGCTCAACCTCCAAGCCTCCTCGCCGCTCCACCTGGCAGCAGCAAAAGGGTGCTTGGAGATAGTCAAAAGTCTGGTGCTGGTCAACGCTGATCTGGGCTTGGTCTGGGATCGGGACGGGTTGACTCCTCTGCATCTGGGGGTGATCAAGGGTCGGGTTGGGGTGGTGGCTGAGTTGGCCCGAGTTAGACCGGAGGCGGCTCGGGTGTTGACTCAGGGAGGGGAGAGTGGGTTTCACTTGTGTGTGAAGCATCATAGGTTTGAGGTGTTGAAGGTTTTGGTGGGGTGTGTTGGGAAAGATGATGACTTTGTGAATTGGAGGGATGGGGATGGCAACACTGTTTTGCATGTGGCTGTGGCCAAGAAACAATTAGAGGTGATAAATTACTTGCTGGATAATACAAAGATCGAAGTAAATGCCCAAAATTCAAATGGCTTCACCGCATTGGATGTCTTATCGCATAGTACGAGAGATTTACGAGACTTGGAAATCAAAGAAACCCTTCAATTTGCTGGAGCTTCAAAAATTATTAAGAAGGCACCTTCTGTTATGTTTGATCAAGATACAGTGCAAGTTCCTACCACAATGCAGCCACTGATGTCAAAGAGGAGGAGTTTAAGGCAACTAGTATTTAAGCCGAAGCAGAAAGAAGTTGATTGGTTGGCTAGGAAACGAAGTTCGTTAATGGTTGTGGCTTCACTAATTGCTACAGTGGCATTTCAGTCTGCAATAAACCCGCCAGGTGGAGTTTGGCAGTCGGACTATCTGGAAGATAGCAATGGCAACCCTGTGGATAAACCACACCATGCTGGGCAGTCAGTGATGGCCGATACAGAACCAAGTCAGTATGGACTGTTCATGATTTCCAATACACTTGCTTTCCTTTCATCACTGAGCATAATTCTATTACTTGTGAGTGGATTGCCTATGAAGCGGCGCAGATGGATGTGGATTCAGATGGTGATCATGTGGGTTGCAATCACAGCGCTAACAGCTACGTATTTTCTTGGAATGATATTTATGACACCACAACAGCAGAAGGGGGGTTATCTGTATTATGTGACCCAAGTTTCTGTGCTTGTATGGATGGCACTGATGGGGATCGTGTTTATCGGTAATGTTGTTCGGGCAGCAAGATGGCTACTTAGAAAGTATGGATGCATGAAGCAGAAACCTATAGATGATTCGCTTTATGAAGATTATGACATTGATGAACTTTGA

Protein Analysis

469

Amino Acids

52.0

Weight (kDa)

8.51

Isoelectric Point (pI)

41.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 5 - 95 6.7e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 69 - 123 2.4e-06 Ankyrin repeats (3 copies)
Ank_4 PF13637 73 - 119 5.6e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 130 - 205 5.1e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 141 - 213 7.9e-08 Ankyrin repeats (3 copies)
Ank_5 PF13857 167 - 214 9.8e-07 Ankyrin repeats (many copies)
PGG PF13962 282 - 403 4.4e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 52
AccB1I GGYRCC 2 cut(s) 89, 727
AccBSI CCGCTC 1 cut(s) 217
AciI CCGC 8 cut(s) 126, 144, 153, 215, 386, 630, 926, 1123
AclWI GGATC 2 cut(s) 306, 1298
AcoI YGGCCR 3 cut(s) 136, 546, 1014
AcsI RAATTY 1 cut(s) 613
AcuI CTGAAG 1 cut(s) 50
AfaI GTAC 2 cut(s) 42, 655
AfeI AGCGCT 1 cut(s) 1176
AfiI CCNNNNNNNGG 1 cut(s) 932
AflIII ACRYGT 1 cut(s) 118
AgsI TTSAA 4 cut(s) 460, 618, 695, 711
AhlI ACTAGT 1 cut(s) 814
AjiI CACGTC 1 cut(s) 121
AjnI CCWGG 2 cut(s) 222, 928
AleI CACNNNNGTG 1 cut(s) 429
AloI GAACNNNNNNTCC 2 cut(s) 850, 882
AluBI AGCT 3 cut(s) 13, 707, 1184
AluI AGCT 3 cut(s) 13, 707, 1184
Alw26I GTCTC 1 cut(s) 663
AlwI GGATC 2 cut(s) 306, 1298
AlwNI CAGNNNCTG 1 cut(s) 784
Ama87I CYCGRG 2 cut(s) 369, 390
Aor51HI AGCGCT 1 cut(s) 1176
AoxI GGCC 4 cut(s) 136, 366, 546, 1014
ApeKI GCWGC 5 cut(s) 23, 227, 230, 778, 1319
ApoI RAATTY 1 cut(s) 613
Asp700I GAANNNNTTC 2 cut(s) 12, 690
AspLEI GCGC 2 cut(s) 1128, 1177
AspS9I GGNCC 1 cut(s) 367
AsuC2I CCSGG 2 cut(s) 169, 190
AsuHPI GGTGA 6 cut(s) 8, 157, 343, 577, 619, 1162
AvaI CYCGRG 2 cut(s) 369, 390
BalI TGGCCA 1 cut(s) 548
BanI GGYRCC 2 cut(s) 89, 727
BanII GRGCYC 2 cut(s) 38, 176
BbvI GCAGC 5 cut(s) 35, 239, 242, 790, 1331
BccI CCATC 9 cut(s) 103, 506, 512, 1006, 1125, 1141, 1270, 1279, 1320
BceAI ACGGC 1 cut(s) 103
BcgI CGANNNNNNTGC 2 cut(s) 587, 621
BciT130I CCWGG 2 cut(s) 224, 930
BclI TGATCA 3 cut(s) 333, 745, 1152
BcnI CCSGG 2 cut(s) 169, 190
BcoDI GTCTC 1 cut(s) 663
BcuI ACTAGT 1 cut(s) 814
BfaI CTAG 2 cut(s) 815, 855
BfmI CTRYAG 2 cut(s) 897, 1365
BfoI RGCGCY 1 cut(s) 1178
BfuAI ACCTGC 1 cut(s) 52
Bme1390I CCNGG 4 cut(s) 169, 190, 224, 930
BmeT110I CYCGRG 2 cut(s) 369, 390
BmgBI CACGTC 1 cut(s) 121
BmgT120I GGNCC 1 cut(s) 367
BmiI GGNNCC 4 cut(s) 37, 91, 173, 729
BmrFI CCNGG 4 cut(s) 169, 190, 224, 930
BmsI GCATC 3 cut(s) 331, 448, 1337
BpmI CTGGAG 1 cut(s) 723
BpuMI CCSGG 2 cut(s) 169, 190
BsaAI YACGTR 1 cut(s) 1188
BsaBI GATNNNNATC 2 cut(s) 1151, 1289
BsaWI WCCGGW 1 cut(s) 379
BsaXI ACNNNNNCTCC 4 cut(s) 33, 63, 404, 434
Bsc4I CCNNNNNNNGG 1 cut(s) 932
Bse3DI GCAATG 1 cut(s) 973
Bse8I GATNNNNATC 2 cut(s) 1151, 1289
BseBI CCWGG 2 cut(s) 224, 930
BseGI GGATG 6 cut(s) 517, 523, 643, 1140, 1281, 1352
BseJI GATNNNNATC 2 cut(s) 1151, 1289
BseLI CCNNNNNNNGG 1 cut(s) 932
BseMI GCAATG 1 cut(s) 973
BseMII CTCAG 4 cut(s) 76, 351, 416, 1073
BseRI GAGGAG 6 cut(s) 41, 50, 199, 306, 811, 814
BseXI GCAGC 5 cut(s) 35, 239, 242, 790, 1331
BseYI CCCAGC 1 cut(s) 998
BshFI GGCC 4 cut(s) 138, 368, 548, 1016
BshNI GGYRCC 2 cut(s) 89, 727
BsiHKCI CYCGRG 2 cut(s) 369, 390
BsiSI CCGG 3 cut(s) 169, 190, 380
BslFI GGGAC 1 cut(s) 317
BslI CCNNNNNNNGG 1 cut(s) 932
BsmAI GTCTC 1 cut(s) 663
BsmFI GGGAC 1 cut(s) 317
BsnI GGCC 4 cut(s) 138, 368, 548, 1016
BsoBI CYCGRG 2 cut(s) 369, 390
Bsp1286I GDGCHC 2 cut(s) 38, 176
Bsp143I GATC 7 cut(s) 280, 298, 333, 594, 745, 1152, 1290
BspACI CCGC 8 cut(s) 126, 144, 153, 215, 386, 630, 926, 1123
BspANI GGCC 4 cut(s) 138, 368, 548, 1016
BspCNI CTCAG 4 cut(s) 75, 352, 415, 1074
BspHI TCATGA 1 cut(s) 1047
BspLI GGNNCC 4 cut(s) 37, 91, 173, 729
BspMI ACCTGC 1 cut(s) 52
BspPI GGATC 2 cut(s) 306, 1298
BspQI GCTCTTC 1 cut(s) 3
BspT107I GGYRCC 2 cut(s) 89, 727
BsrBI CCGCTC 1 cut(s) 217
BsrDI GCAATG 1 cut(s) 973
BssMI GATC 7 cut(s) 280, 298, 333, 594, 745, 1152, 1290
Bst2UI CCWGG 2 cut(s) 224, 930
Bst4CI ACNGT 4 cut(s) 529, 757, 901, 1044
Bst6I CTCTTC 1 cut(s) 3
BstBAI YACGTR 1 cut(s) 1188
BstDEI CTNAG 5 cut(s) 62, 360, 402, 1082, 1334
BstF5I GGATG 6 cut(s) 517, 523, 643, 1140, 1281, 1352
BstH2I RGCGCY 1 cut(s) 1178
BstHHI GCGC 2 cut(s) 1128, 1177
BstKTI GATC 7 cut(s) 283, 301, 336, 597, 748, 1155, 1293
BstMAI GTCTC 1 cut(s) 663
BstMBI GATC 7 cut(s) 280, 298, 333, 594, 745, 1152, 1290
BstMWI GCNNNNNNNGC 6 cut(s) 152, 365, 902, 1120, 1172, 1181
BstNI CCWGG 2 cut(s) 224, 930
BstNSI RCATGY 1 cut(s) 539
BstSCI CCNGG 4 cut(s) 167, 188, 222, 928
BstSFI CTRYAG 2 cut(s) 897, 1365
BstSNI TACGTA 1 cut(s) 1188
BstV1I GCAGC 5 cut(s) 35, 239, 242, 790, 1331
BsuRI GGCC 4 cut(s) 138, 368, 548, 1016
BtrI CACGTC 1 cut(s) 121
BtsCI GGATG 6 cut(s) 517, 523, 643, 1140, 1281, 1352
BtsIMutI CAGTG 7 cut(s) 525, 762, 782, 906, 1014, 1079, 1280
BveI ACCTGC 1 cut(s) 52
CaiI CAGNNNCTG 1 cut(s) 784
CciI TCATGA 1 cut(s) 1047
CfoI GCGC 2 cut(s) 1128, 1177
Cfr13I GGNCC 1 cut(s) 367
Csp6I GTAC 2 cut(s) 41, 654
CviAII CATG 5 cut(s) 536, 995, 1048, 1156, 1351
CviQI GTAC 2 cut(s) 41, 654
DdeI CTNAG 5 cut(s) 62, 360, 402, 1082, 1334
DpnI GATC 7 cut(s) 282, 300, 335, 596, 747, 1154, 1292
DpnII GATC 7 cut(s) 280, 298, 333, 594, 745, 1152, 1290
EaeI YGGCCR 3 cut(s) 136, 546, 1014
Eam1104I CTCTTC 1 cut(s) 3
EarI CTCTTC 1 cut(s) 3
EciI GGCGGA 1 cut(s) 133
Eco105I TACGTA 1 cut(s) 1188
Eco24I GRGCYC 2 cut(s) 38, 176
Eco47III AGCGCT 1 cut(s) 1176
Eco57I CTGAAG 1 cut(s) 50
Eco88I CYCGRG 2 cut(s) 369, 390
EcoRII CCWGG 2 cut(s) 222, 928
EcoT22I ATGCAT 1 cut(s) 1352
EcoT38I GRGCYC 2 cut(s) 38, 176
FaeI CATG 5 cut(s) 539, 998, 1051, 1159, 1354
FalI AAGNNNNNCTT 3 cut(s) 29, 675, 707
FaqI GGGAC 1 cut(s) 317
FatI CATG 5 cut(s) 535, 994, 1047, 1155, 1350
FauI CCCGC 1 cut(s) 933
FbaI TGATCA 3 cut(s) 333, 745, 1152
FokI GGATG 6 cut(s) 524, 530, 650, 1147, 1288, 1359
FriOI GRGCYC 2 cut(s) 38, 176
FspBI CTAG 2 cut(s) 815, 855
GlaI GCGC 2 cut(s) 1127, 1176
GsaI CCCAGC 1 cut(s) 1002
GsuI CTGGAG 1 cut(s) 723
HaeII RGCGCY 1 cut(s) 1178
HaeIII GGCC 4 cut(s) 138, 368, 548, 1016
HapII CCGG 3 cut(s) 169, 190, 380
HhaI GCGC 2 cut(s) 1128, 1177
Hin1II CATG 5 cut(s) 539, 998, 1051, 1159, 1354
Hin6I GCGC 2 cut(s) 1126, 1175
HinP1I GCGC 2 cut(s) 1126, 1175
HincII GTYRAC 3 cut(s) 274, 312, 399
HindII GTYRAC 3 cut(s) 274, 312, 399
HinfI GANTC 4 cut(s) 313, 400, 1141, 1373
HpaII CCGG 3 cut(s) 169, 190, 380
HphI GGTGA 6 cut(s) 8, 157, 343, 577, 619, 1162
Hpy166II GTNNAC 3 cut(s) 274, 312, 399
Hpy188I TCNGA 4 cut(s) 65, 106, 949, 1146
Hpy188III TCNNGA 4 cut(s) 302, 749, 956, 1048
Hpy8I GTNNAC 3 cut(s) 274, 312, 399
Hpy99I CGWCG 1 cut(s) 125
HpyAV CCTTC 7 cut(s) 25, 157, 454, 701, 718, 741, 1222
HpyCH4III ACNGT 4 cut(s) 529, 757, 901, 1044
HpyCH4IV ACGT 2 cut(s) 120, 1187
HpyCH4V TGCA 7 cut(s) 322, 535, 760, 778, 917, 1166, 1350
HpyF10VI GCNNNNNNNGC 6 cut(s) 152, 365, 902, 1120, 1172, 1181
HpyF3I CTNAG 5 cut(s) 62, 360, 402, 1082, 1334
HpySE526I ACGT 2 cut(s) 120, 1187
Hsp92II CATG 5 cut(s) 539, 998, 1051, 1159, 1354
HspAI GCGC 2 cut(s) 1126, 1175
Ksp22I TGATCA 3 cut(s) 333, 745, 1152
Kzo9I GATC 7 cut(s) 280, 298, 333, 594, 745, 1152, 1290
LguI GCTCTTC 1 cut(s) 3
LmnI GCTCC 4 cut(s) 41, 171, 222, 704
Lsp1109I GCAGC 5 cut(s) 35, 239, 242, 790, 1331
LweI GCATC 3 cut(s) 331, 448, 1337
MaeI CTAG 2 cut(s) 815, 855
MaeII ACGT 2 cut(s) 120, 1187
MaeIII GTNAC 2 cut(s) 159, 1249
MalI GATC 7 cut(s) 282, 300, 335, 596, 747, 1154, 1292
MbiI CCGCTC 1 cut(s) 217
MboI GATC 7 cut(s) 280, 298, 333, 594, 745, 1152, 1290
MboII GAAGA 4 cut(s) 17, 20, 971, 1397
MhlI GDGCHC 2 cut(s) 38, 176
MlsI TGGCCA 1 cut(s) 548
MluCI AATT 8 cut(s) 502, 557, 571, 613, 695, 714, 891, 1089
MluNI TGGCCA 1 cut(s) 548
MlyI GAGTC 2 cut(s) 307, 394
MmeI TCCRAC 2 cut(s) 129, 927
Mox20I TGGCCA 1 cut(s) 548
Mph1103I ATGCAT 1 cut(s) 1352
MroXI GAANNNNTTC 2 cut(s) 12, 690
MscI TGGCCA 1 cut(s) 548
MseI TTAA 4 cut(s) 720, 806, 822, 872
MslI CAYNNNNRTG 1 cut(s) 429
Msp20I TGGCCA 1 cut(s) 548
MspI CCGG 3 cut(s) 169, 190, 380
MspR9I CCNGG 4 cut(s) 169, 190, 224, 930
MvaI CCWGG 2 cut(s) 224, 930
MwoI GCNNNNNNNGC 6 cut(s) 152, 365, 902, 1120, 1172, 1181
NciI CCSGG 2 cut(s) 169, 190
NdeII GATC 7 cut(s) 280, 298, 333, 594, 745, 1152, 1290
NlaIII CATG 5 cut(s) 539, 998, 1051, 1159, 1354
NlaIV GGNNCC 4 cut(s) 37, 91, 173, 729
NmeAIII GCCGAG 2 cut(s) 114, 181
NmuCI GTSAC 1 cut(s) 1249
NsiI ATGCAT 1 cut(s) 1352
NspI RCATGY 1 cut(s) 539
OliI CACNNNNGTG 1 cut(s) 429
PagI TCATGA 1 cut(s) 1047
PciSI GCTCTTC 1 cut(s) 3
PcsI WCGNNNNNNNCGW 1 cut(s) 653
PdmI GAANNNNTTC 2 cut(s) 12, 690
PfeI GAWTC 2 cut(s) 1141, 1373
PleI GAGTC 2 cut(s) 307, 394
PpsI GAGTC 2 cut(s) 307, 394
Ppu21I YACGTR 1 cut(s) 1188
Psp6I CCWGG 2 cut(s) 222, 928
PspFI CCCAGC 1 cut(s) 998
PspGI CCWGG 2 cut(s) 222, 928
PspN4I GGNNCC 4 cut(s) 37, 91, 173, 729
PspPI GGNCC 1 cut(s) 367
PsrI GAACNNNNNNTAC 2 cut(s) 1028, 1060
PstNI CAGNNNCTG 1 cut(s) 784
RsaI GTAC 2 cut(s) 42, 655
RsaNI GTAC 2 cut(s) 41, 654
RseI CAYNNNNRTG 1 cut(s) 429
SapI GCTCTTC 1 cut(s) 3
SaqAI TTAA 4 cut(s) 720, 806, 822, 872
Sau3AI GATC 7 cut(s) 280, 298, 333, 594, 745, 1152, 1290
Sau96I GGNCC 1 cut(s) 367
SchI GAGTC 2 cut(s) 307, 394
ScrFI CCNGG 4 cut(s) 169, 190, 224, 930
SduI GDGCHC 2 cut(s) 38, 176
SfaNI GCATC 3 cut(s) 331, 448, 1337
SfcI CTRYAG 2 cut(s) 897, 1365
SmiMI CAYNNNNRTG 1 cut(s) 429
SnaBI TACGTA 1 cut(s) 1188
SpeI ACTAGT 1 cut(s) 814
Sse9I AATT 8 cut(s) 502, 557, 571, 613, 695, 714, 891, 1089
SsiI CCGC 8 cut(s) 126, 144, 153, 215, 386, 630, 926, 1123
SspMI CTAG 2 cut(s) 815, 855
StyD4I CCNGG 4 cut(s) 167, 188, 222, 928
TaaI ACNGT 4 cut(s) 529, 757, 901, 1044
TaiI ACGT 2 cut(s) 123, 1190
TaqI TCGA 2 cut(s) 54, 597
TasI AATT 8 cut(s) 502, 557, 571, 613, 695, 714, 891, 1089
TauI GCSGC 5 cut(s) 128, 155, 217, 389, 1126
TfiI GAWTC 2 cut(s) 1141, 1373
Tru1I TTAA 4 cut(s) 720, 806, 822, 872
Tru9I TTAA 4 cut(s) 720, 806, 822, 872
TscAI CASTG 7 cut(s) 532, 762, 789, 906, 1014, 1086, 1287
TseFI GTSAC 1 cut(s) 1249
TseI GCWGC 5 cut(s) 23, 227, 230, 778, 1319
Tsp45I GTSAC 1 cut(s) 1249
TspDTI ATGAA 5 cut(s) 1036, 1065, 1133, 1367, 1398
TspGWI ACGGA 1 cut(s) 28
TspRI CASTG 7 cut(s) 532, 762, 789, 906, 1014, 1086, 1287
XapI RAATTY 1 cut(s) 613
XceI RCATGY 1 cut(s) 539
XcmI CCANNNNNNNNNTGG 2 cut(s) 617, 936
XmnI GAANNNNTTC 2 cut(s) 12, 690
XspI CTAG 2 cut(s) 815, 855
Zsp2I ATGCAT 1 cut(s) 1352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.