FvH4_4g10200

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000060
Physical Location & Seq
Forward (+)
13321345 .. 13323606
2262 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g10200.t1

Sequence Viewer

Length: 1470 bp
ATGATTTCTGATACCGAAGAGGATTCGGTTCAAGAATCTGTAGCTTCTATGAGGACAAAAGAAAATATAGGAGAAGTTTTACAGAAGATAAAGTCGAAGAAAAAGAGAAAAGAGGTCCAGAAGTGTGCCGCTGCTGAAGAAGAAGAAGAAGTAGTACTGGTAGAAGAAGAAGATGATGATTACACTGAAGATGAAGAGGGGGAAATTGAAAAGTATCTTTTTCAGAAAAGATCAACAGGCAGAAAAAGAAAACAAGCGGAGACAGATTCAGGGGAGGAGGAGGACAAAGACAAGAGAAAAAAGAAGAAGGAAAAAGGAGGAGAAGGTGACTTGACCAAGATCAAACACGTGCAGCAAAAGTGCTCACTGACATCATTTTCTACGTTAATGAATAGAGTCAAGGAGAGCATCCCAGAAGAATCATGGGAGTTGATAAACAACACTTGTTTTCGGGGAATAATTGAAGCATTCAGATTGGGCAAGGTTGAGGAGGATCAAGTGAAGAAGCTTGAATCTGATTTTGATATCCTAATGAGGCACTACAACAGTGACAATAAAAACTTCATATTTGGGAACAGGGAGATTGAAATTACGGAGCATGATGTTCATTCAATTTTTGGAATAACCAAAGAAGGATCGGATGTGGATATGACAATAGACCAGAAATACTGCAAGGACAAGAAGAATGTGGCAAATTCTGCTGTCTTTGGAAAGCAAACAAGAAGAACAATCACCAGAAAGGTTATTGATGACACATTAATGGAAGAGCTTAGGAAGATTCAGAAGAAGAAGGTGGATCCAAGGAAGATAGCCTCTTTGGGACTTCACAAGCACGTAAGGGGGGAGCCAAGAGTTTTGAACGGATGTCTCCTTCTAGTTCTATACTGGTTTCTTGAGAAAACAAAAATAAAGAAGCGGATTATCGGGAAAGAGAAGGAGACTCCCAGATTTATAAAATTGTCAATACAAGAGATCATCAAAGAAAAGGAGTATTTGAGAAGACCTGAATTGCTAGAGATAATGGAACTCATAATAGAAGGTCCATGGATGGATGAAGATGAAACGAGTTTCGGCAATGATGAGCGGCAGCAAGATGACAATGGAACACCAAGGACAATTGATTGGGAGCTGCCGATGGAAGATATGAAGAAGAAGCTGATAGAACTTGCCAAAGCAAATGAAGAACTGGTGAACAAAAACATTGAATTGCTCGACAAGTTAAACAAAGCGGACAGCCGAATCATTGAGCTAGAGAAAGAAAGGAGGGTAGACAAAAATCAAATCAACGTTCTCAAGAAACAGTTGCACAAGGTGGCAAAACATGCTCAGACAAAGCAGATAATATGTGTAACTGAGGAGAAGGAGGATGAGGTGGATAGGTCAAAGCCGGTTGAAGAGGAAGAATATAACTACAGAGACAAAATGGAAGATCGTAGCTACAGAGAGGAGCAACCAGGACTTGAGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

490

Amino Acids

57.57

Weight (kDa)

5.57

Isoelectric Point (pI)

51.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 953
AccBSI CCGCTC 1 cut(s) 1084
AccI GTMKAC 1 cut(s) 1269
AciI CCGC 5 cut(s) 129, 257, 916, 1084, 1229
AclI AACGTT 1 cut(s) 1287
AclWI GGATC 4 cut(s) 501, 643, 791, 804
AcsI RAATTY 1 cut(s) 694
AcuI CTGAAG 2 cut(s) 156, 207
AcvI CACGTG 1 cut(s) 349
AdeI CACNNNGTG 1 cut(s) 1312
AfaI GTAC 1 cut(s) 156
AflIII ACRYGT 1 cut(s) 346
AgsI TTSAA 9 cut(s) 32, 209, 464, 512, 587, 612, 859, 1205, 1394
AjnI CCWGG 1 cut(s) 1453
AluBI AGCT 7 cut(s) 44, 508, 769, 1129, 1156, 1249, 1437
AluI AGCT 7 cut(s) 44, 508, 769, 1129, 1156, 1249, 1437
Alw21I GWGCWC 1 cut(s) 365
Alw26I GTCTC 4 cut(s) 254, 872, 932, 1410
AlwI GGATC 4 cut(s) 501, 643, 791, 804
ApeKI GCWGC 4 cut(s) 131, 352, 1087, 1129
ApoI RAATTY 1 cut(s) 694
AseI ATTAAT 1 cut(s) 758
AspS9I GGNCC 2 cut(s) 115, 1040
AsuHPI GGTGA 3 cut(s) 338, 724, 1201
AvaII GGWCC 2 cut(s) 115, 1040
BamHI GGATCC 1 cut(s) 796
BarI GAAGNNNNNNTAC 2 cut(s) 138, 170
BbrPI CACGTG 1 cut(s) 349
BbsI GAAGAC 1 cut(s) 1006
Bbv12I GWGCWC 1 cut(s) 365
BbvI GCAGC 4 cut(s) 118, 364, 1099, 1116
BccI CCATC 2 cut(s) 1042, 1129
BciT130I CCWGG 1 cut(s) 1455
BcoDI GTCTC 4 cut(s) 254, 872, 932, 1410
BfaI CTAG 3 cut(s) 875, 1013, 1250
BfmI CTRYAG 3 cut(s) 39, 1411, 1438
BisI GCNGC 6 cut(s) 129, 132, 353, 1085, 1088, 1130
BlsI GCNGC 6 cut(s) 130, 133, 354, 1086, 1089, 1131
BmcAI AGTACT 1 cut(s) 156
Bme1390I CCNGG 1 cut(s) 1455
Bme18I GGWCC 2 cut(s) 115, 1040
BmgT120I GGNCC 2 cut(s) 115, 1040
BmiI GGNNCC 2 cut(s) 798, 846
BmrFI CCNGG 1 cut(s) 1455
BmsI GCATC 1 cut(s) 417
BpiI GAAGAC 1 cut(s) 1006
Bpu10I CCTNAGC 1 cut(s) 770
BpuEI CTTGAG 2 cut(s) 914, 1277
BsaAI YACGTR 2 cut(s) 349, 835
BsaJI CCNNGG 3 cut(s) 800, 1043, 1109
Bse118I RCCGGY 1 cut(s) 1387
Bse1I ACTGG 3 cut(s) 162, 890, 1191
Bse3DI GCAATG 1 cut(s) 1081
BseBI CCWGG 1 cut(s) 1455
BseDI CCNNGG 3 cut(s) 800, 1043, 1109
BseGI GGATG 6 cut(s) 408, 646, 869, 1053, 1057, 1372
BseMI GCAATG 1 cut(s) 1081
BseMII CTCAG 2 cut(s) 1340, 1344
BseNI ACTGG 3 cut(s) 162, 890, 1191
BseRI GAGGAG 6 cut(s) 290, 293, 333, 503, 1370, 1460
BseXI GCAGC 4 cut(s) 118, 364, 1099, 1116
BsgI GTGCAG 1 cut(s) 371
BsiHKAI GWGCWC 1 cut(s) 365
BsiSI CCGG 1 cut(s) 1388
BslFI GGGAC 1 cut(s) 834
BsmAI GTCTC 4 cut(s) 254, 872, 932, 1410
BsmFI GGGAC 1 cut(s) 834
BsmI GAATGC 1 cut(s) 467
Bsp1286I GDGCHC 1 cut(s) 365
Bsp143I GATC 7 cut(s) 230, 339, 493, 635, 796, 972, 1429
Bsp19I CCATGG 1 cut(s) 1043
BspACI CCGC 5 cut(s) 129, 257, 916, 1084, 1229
BspCNI CTCAG 2 cut(s) 1339, 1345
BspLI GGNNCC 2 cut(s) 798, 846
BspPI GGATC 4 cut(s) 501, 643, 791, 804
BspQI GCTCTTC 1 cut(s) 759
BsrBI CCGCTC 1 cut(s) 1084
BsrDI GCAATG 1 cut(s) 1081
BsrFI RCCGGY 1 cut(s) 1387
BsrI ACTGG 3 cut(s) 162, 890, 1191
BssAI RCCGGY 1 cut(s) 1387
BssECI CCNNGG 3 cut(s) 800, 1043, 1109
BssMI GATC 7 cut(s) 230, 339, 493, 635, 796, 972, 1429
BssT1I CCWWGG 3 cut(s) 800, 1043, 1109
Bst2UI CCWGG 1 cut(s) 1455
Bst4CI ACNGT 2 cut(s) 548, 1302
Bst6I CTCTTC 4 cut(s) 12, 189, 759, 1389
BstAPI GCANNNNNTGC 2 cut(s) 698, 1322
BstBAI YACGTR 2 cut(s) 349, 835
BstDEI CTNAG 3 cut(s) 770, 1326, 1353
BstDSI CCRYGG 1 cut(s) 1043
BstF5I GGATG 6 cut(s) 408, 646, 869, 1053, 1057, 1372
BstKTI GATC 7 cut(s) 233, 342, 496, 638, 799, 975, 1432
BstMAI GTCTC 4 cut(s) 254, 872, 932, 1410
BstMBI GATC 7 cut(s) 230, 339, 493, 635, 796, 972, 1429
BstMWI GCNNNNNNNGC 2 cut(s) 698, 1322
BstNI CCWGG 1 cut(s) 1455
BstNSI RCATGY 1 cut(s) 1325
BstSCI CCNGG 1 cut(s) 1453
BstSFI CTRYAG 3 cut(s) 39, 1411, 1438
BstV1I GCAGC 4 cut(s) 118, 364, 1099, 1116
BstV2I GAAGAC 1 cut(s) 1006
BstX2I RGATCY 1 cut(s) 796
BstYI RGATCY 1 cut(s) 796
BtgI CCRYGG 1 cut(s) 1043
BtsCI GGATG 6 cut(s) 408, 646, 869, 1053, 1057, 1372
BtsIMutI CAGTG 3 cut(s) 183, 365, 553
Cfr10I RCCGGY 1 cut(s) 1387
Cfr13I GGNCC 2 cut(s) 115, 1040
Csp6I GTAC 1 cut(s) 155
CviAII CATG 4 cut(s) 423, 599, 1044, 1322
CviQI GTAC 1 cut(s) 155
DdeI CTNAG 3 cut(s) 770, 1326, 1353
DpnI GATC 7 cut(s) 232, 341, 495, 637, 798, 974, 1431
DpnII GATC 7 cut(s) 230, 339, 493, 635, 796, 972, 1429
DraIII CACNNNGTG 1 cut(s) 1312
Eam1104I CTCTTC 4 cut(s) 12, 189, 759, 1389
EarI CTCTTC 4 cut(s) 12, 189, 759, 1389
Eco130I CCWWGG 3 cut(s) 800, 1043, 1109
Eco32I GATATC 1 cut(s) 526
Eco47I GGWCC 2 cut(s) 115, 1040
Eco57I CTGAAG 2 cut(s) 156, 207
Eco72I CACGTG 1 cut(s) 349
EcoRII CCWGG 1 cut(s) 1453
EcoRV GATATC 1 cut(s) 526
EcoT14I CCWWGG 3 cut(s) 800, 1043, 1109
ErhI CCWWGG 3 cut(s) 800, 1043, 1109
FaeI CATG 4 cut(s) 426, 602, 1047, 1325
FaqI GGGAC 1 cut(s) 834
FatI CATG 4 cut(s) 422, 598, 1043, 1321
FblI GTMKAC 1 cut(s) 1269
Fnu4HI GCNGC 6 cut(s) 129, 132, 353, 1085, 1088, 1130
FokI GGATG 6 cut(s) 395, 653, 876, 1060, 1064, 1379
Fsp4HI GCNGC 6 cut(s) 129, 132, 353, 1085, 1088, 1130
FspBI CTAG 3 cut(s) 875, 1013, 1250
GluI GCNGC 6 cut(s) 129, 132, 353, 1085, 1088, 1130
HapII CCGG 1 cut(s) 1388
Hin1II CATG 4 cut(s) 426, 602, 1047, 1325
HindIII AAGCTT 1 cut(s) 506
HinfI GANTC 9 cut(s) 23, 35, 266, 396, 419, 512, 778, 940, 1239
HpaII CCGG 1 cut(s) 1388
HphI GGTGA 3 cut(s) 338, 724, 1201
Hpy166II GTNNAC 2 cut(s) 1192, 1270
Hpy188I TCNGA 7 cut(s) 10, 225, 473, 517, 640, 783, 1329
Hpy188III TCNNGA 5 cut(s) 32, 118, 893, 925, 1294
Hpy8I GTNNAC 2 cut(s) 1192, 1270
HpyAV CCTTC 8 cut(s) 301, 317, 626, 784, 881, 928, 1031, 1354
HpyCH4III ACNGT 2 cut(s) 548, 1302
HpyCH4IV ACGT 4 cut(s) 348, 383, 834, 1287
HpyCH4V TGCA 3 cut(s) 352, 672, 1306
HpyF10VI GCNNNNNNNGC 2 cut(s) 698, 1322
HpyF3I CTNAG 3 cut(s) 770, 1326, 1353
HpySE526I ACGT 4 cut(s) 348, 383, 834, 1287
Hsp92II CATG 4 cut(s) 426, 602, 1047, 1325
Kzo9I GATC 7 cut(s) 230, 339, 493, 635, 796, 972, 1429
LguI GCTCTTC 1 cut(s) 759
LmnI GCTCC 4 cut(s) 595, 844, 1126, 1447
Lsp1109I GCAGC 4 cut(s) 118, 364, 1099, 1116
LweI GCATC 1 cut(s) 417
MaeI CTAG 3 cut(s) 875, 1013, 1250
MaeII ACGT 4 cut(s) 348, 383, 834, 1287
MaeIII GTNAC 3 cut(s) 326, 548, 1348
MalI GATC 7 cut(s) 232, 341, 495, 637, 798, 974, 1431
MbiI CCGCTC 1 cut(s) 1084
MboI GATC 7 cut(s) 230, 339, 493, 635, 796, 972, 1429
MfeI CAATTG 1 cut(s) 1116
MflI RGATCY 1 cut(s) 796
MhlI GDGCHC 1 cut(s) 365
MluCI AATT 9 cut(s) 204, 459, 588, 612, 694, 956, 1007, 1116, 1205
MlyI GAGTC 2 cut(s) 405, 934
MseI TTAA 3 cut(s) 386, 758, 1220
MslI CAYNNNNRTG 1 cut(s) 758
MspA1I CMGCKG 1 cut(s) 131
MspI CCGG 1 cut(s) 1388
MspR9I CCNGG 1 cut(s) 1455
MunI CAATTG 1 cut(s) 1116
Mva1269I GAATGC 1 cut(s) 467
MvaI CCWGG 1 cut(s) 1455
MwoI GCNNNNNNNGC 2 cut(s) 698, 1322
NcoI CCATGG 1 cut(s) 1043
NdeII GATC 7 cut(s) 230, 339, 493, 635, 796, 972, 1429
NlaIII CATG 4 cut(s) 426, 602, 1047, 1325
NlaIV GGNNCC 2 cut(s) 798, 846
NmuCI GTSAC 2 cut(s) 326, 548
NspI RCATGY 1 cut(s) 1325
PciSI GCTCTTC 1 cut(s) 759
PctI GAATGC 1 cut(s) 467
PfeI GAWTC 7 cut(s) 23, 35, 266, 419, 512, 778, 1239
PkrI GCNGC 6 cut(s) 130, 133, 354, 1086, 1089, 1131
PleI GAGTC 2 cut(s) 404, 934
PmaCI CACGTG 1 cut(s) 349
PmlI CACGTG 1 cut(s) 349
PpsI GAGTC 2 cut(s) 404, 934
Ppu21I YACGTR 2 cut(s) 349, 835
PshBI ATTAAT 1 cut(s) 758
PsiI TTATAA 1 cut(s) 953
Psp1406I AACGTT 1 cut(s) 1287
Psp6I CCWGG 1 cut(s) 1453
PspCI CACGTG 1 cut(s) 349
PspGI CCWGG 1 cut(s) 1453
PspN4I GGNNCC 2 cut(s) 798, 846
PspPI GGNCC 2 cut(s) 115, 1040
PsuI RGATCY 1 cut(s) 796
RsaI GTAC 1 cut(s) 156
RsaNI GTAC 1 cut(s) 155
RseI CAYNNNNRTG 1 cut(s) 758
SapI GCTCTTC 1 cut(s) 759
SaqAI TTAA 3 cut(s) 386, 758, 1220
SatI GCNGC 6 cut(s) 129, 132, 353, 1085, 1088, 1130
Sau3AI GATC 7 cut(s) 230, 339, 493, 635, 796, 972, 1429
Sau96I GGNCC 2 cut(s) 115, 1040
ScaI AGTACT 1 cut(s) 156
SchI GAGTC 2 cut(s) 405, 934
ScrFI CCNGG 1 cut(s) 1455
SduI GDGCHC 1 cut(s) 365
SfaNI GCATC 1 cut(s) 417
SfcI CTRYAG 3 cut(s) 39, 1411, 1438
SinI GGWCC 2 cut(s) 115, 1040
SmiMI CAYNNNNRTG 1 cut(s) 758
SmlI CTYRAG 3 cut(s) 893, 1292, 1460
SmoI CTYRAG 3 cut(s) 893, 1292, 1460
Sse9I AATT 9 cut(s) 204, 459, 588, 612, 694, 956, 1007, 1116, 1205
SsiI CCGC 5 cut(s) 129, 257, 916, 1084, 1229
SspMI CTAG 3 cut(s) 875, 1013, 1250
StyD4I CCNGG 1 cut(s) 1453
StyI CCWWGG 3 cut(s) 800, 1043, 1109
TaaI ACNGT 2 cut(s) 548, 1302
TaiI ACGT 4 cut(s) 351, 386, 837, 1290
TaqI TCGA 2 cut(s) 95, 1212
TasI AATT 9 cut(s) 204, 459, 588, 612, 694, 956, 1007, 1116, 1205
TatI WGTACW 1 cut(s) 154
TauI GCSGC 2 cut(s) 131, 1087
TfiI GAWTC 7 cut(s) 23, 35, 266, 419, 512, 778, 1239
Tru1I TTAA 3 cut(s) 386, 758, 1220
Tru9I TTAA 3 cut(s) 386, 758, 1220
TscAI CASTG 3 cut(s) 190, 372, 553
TseFI GTSAC 2 cut(s) 326, 548
TseI GCWGC 4 cut(s) 131, 352, 1087, 1129
Tsp45I GTSAC 2 cut(s) 326, 548
TspDTI ATGAA 8 cut(s) 207, 404, 553, 596, 1068, 1074, 1160, 1194
TspGWI ACGGA 2 cut(s) 608, 876
TspRI CASTG 3 cut(s) 190, 372, 553
VpaK11BI GGWCC 2 cut(s) 115, 1040
VspI ATTAAT 1 cut(s) 758
XapI RAATTY 1 cut(s) 694
XceI RCATGY 1 cut(s) 1325
XcmI CCANNNNNNNNNTGG 1 cut(s) 420
XmiI GTMKAC 1 cut(s) 1269
XspI CTAG 3 cut(s) 875, 1013, 1250
ZrmI AGTACT 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.