RchiOBHm_Chr1g0363541

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000060
Physical Location & Seq
Reverse (-)
54914217 .. 54917349
3133 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58829

Sequence Viewer

Length: 2079 bp
ATGGAGGATGAGAAACCGAGATTTGTGAGGTGGTCGATAAAGGAGCTGTTCAACCTGCAGAAGCTCCATCAGAATCCAGACTGGCCAGAGGAGTTGATAAAAGATGGGCCTTGGTTAGAACATTGCTACATCAACTTGTCGGATACGGAGGAGGAGCAAGAAACACCAAGTTTCAACAACTGGGTTCCCCAAGCGAGCCAAGACGAGGAAGAGGAGACCATAAGGCTTACTGGTAACATGAAAGTTCTGCTAAAAGAAATGGATAGAGTGATTGAAGACAATGGTGAAAAACAGGAAATGGAGAAGCAAATGAAGAAACTATTGGAAGCAAATGAGGGGCTTGCAAACCATATTAGGGAGCTTTGGAAAAAGGTTACTGTTGCTGATGAGAAAATTGAGAGTATGGAGAAAAAAATGACTGAGGTGATGCAGGAAAACAGATCGCACCAGAACCACATAAAAGCTCTGAAGAAATGTTTGGCGAAAGGAACCAGCAGGAACCCTGACCTGAAAAGCAGTGAGCAACAAAATAATCAACAACAGATGGTGCAGGTGTCGACCGAGAAAGATCACAGGAGGGAATCTACGGGGAACTTTGCAGAATATGACACTCAAACACCAGTCAACGAAGAACCAAGGGCAGCAGATCCAATTAATGCATCTCCAATATCTTACAAGAGTCCAGAACGGGAAGTGTTTGAGGATACACATTTGGTCACACTAAATGAGATGGAATCAGAAAAAATAGATCAACTTGTGTCGAAAATACTGGAAGCAGCTGAGACGGTTGAAATGCCTGAGGCAGGAACAGAAATGGCAGTACCATCGGTCCCCAGGGAGAAGAAAACGGTTGACATGCATTCAATCGAGAGGAATGTGAAAGTAAAAAAGAGAAAGGCAGCTGTGAAGGACAAGGACGATGACTTTGAGTATGACACACCAGAGATCCTGAAGACTTATGAAAAGAAAAGAAAGACTGCTGCACAGGAACAGCCAAAGCAGAAAAAGAAAGCACAACCGAAGCCGCCAACAAAAATTCAGAAAGGAAAAGAAGTGCAGCACCAAATACAAATAAAAGAGGTGAATTGTGAGAAGTACACATGGAAAACATTAAAGCCTGAACTAGCAAGACACTACCAGCAATTCTTTGAGATGGTGGATGACAATACATATGTCTACTGGAGCAGTGAAAATGGAATACTAGGGGTAACCAGGGGAGACATGAAGATTATCGTAGAAGAGAAAGATCTGGATGTTAATGTGGTCAAGGCTTACACTGAAATGTTGCAGAAGGAAATGAAAGAAACGAACACTCAGATTGGATTACTAAACATCGAAGCAGCGTTTTACGCAGTTCAACACGAAAAGAAACTAGCGGATTTCAAAAAAGAAGGCAAGAACATTCTCAAAGACGACTTCAAAGGCCATGATATTGAAATAGAGTTATTCCTGATCGAAGAACTGTGGAGTAAGTTCAGCTACCCCAAGGTGATTATCCCAATACACCATTACTACAGCCAGCACTACACACTGCTTGTCATCGACAATGAGAAAAAGCAGTTTGTTCACATGAACTCTATGCTGCCACCAAAGAAGGAATGGACAAAAGATAACCAATATTACAACAACGCAAACTGGGTGGTTAAGCACATAAGGAGGTTCATACACGACGTGAAGGTGACAGGGACAATATTTCCAGATGACAGCCAGGATCAAGAGAACACAAGAGAGAAGTGCAAAGGTGAGGACAGTAAAGGAGAACTTGTCACTGAGGTTGAAGAAATGACACCAAGAGAGAAAGAGGTCAGAAGGTGGATCTTGGATAATCAAATCGGGGAAAATGACTATGAGCTTGTAGAAGACTTGAACTGCCCTCAGCAGAAATCCTGTTCGGATGACTGTGGGCCGTTTATGATCCATTTCATGGAAAGCATAGTTCACGGAGTGCAACCCAGCAAGAAGAAAGGCAATGACATGAGGAAAACAATTCTTGAGAGGTTTGCAAAGGAGGAAAGTGCTTGGAGCGTCGAAAAATACCTTGCTGAAACTGCAGATGCTGTAGGAGAGCCAAAAAAATAG

Protein Analysis

692

Amino Acids

81.11

Weight (kDa)

5.46

Isoelectric Point (pI)

45.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 541
Acc36I ACCTGC 2 cut(s) 63, 541
AccB7I CCANNNNNTGG 1 cut(s) 1924
AccI GTMKAC 2 cut(s) 557, 1176
AciI CCGC 2 cut(s) 1025, 1376
AclWI GGATC 5 cut(s) 641, 940, 1719, 1823, 1909
AcoI YGGCCR 1 cut(s) 83
AcsI RAATTY 1 cut(s) 1035
AcuI CTGAAG 2 cut(s) 488, 971
AdeI CACNNNGTG 2 cut(s) 1672, 1945
AfaI GTAC 2 cut(s) 822, 1097
AfiI CCNNNNNNNGG 4 cut(s) 205, 355, 803, 1924
AjiI CACGTC 1 cut(s) 1672
AjnI CCWGG 3 cut(s) 833, 1211, 1707
AjuI GAANNNNNNNTTGG 4 cut(s) 305, 337, 461, 493
AluBI AGCT 8 cut(s) 46, 64, 361, 464, 779, 902, 1479, 1852
AluI AGCT 8 cut(s) 46, 64, 361, 464, 779, 902, 1479, 1852
Alw26I GTCTC 3 cut(s) 209, 776, 1212
AlwI GGATC 5 cut(s) 641, 940, 1719, 1823, 1909
AlwNI CAGNNNCTG 1 cut(s) 2057
AoxI GGCC 4 cut(s) 83, 107, 1423, 1904
ApeKI GCWGC 7 cut(s) 641, 776, 899, 980, 1057, 1340, 1582
ApoI RAATTY 1 cut(s) 1035
ArsI GACNNNNNNTTYG 2 cut(s) 908, 940
AseI ATTAAT 1 cut(s) 654
AspS9I GGNCC 3 cut(s) 107, 829, 1904
AsuHPI GGTGA 6 cut(s) 296, 436, 1093, 1501, 1690, 1754
AvaII GGWCC 1 cut(s) 829
AxyI CCTNAGG 1 cut(s) 798
BalI TGGCCA 1 cut(s) 85
BbsI GAAGAC 3 cut(s) 282, 959, 1866
BbvCI CCTCAGC 1 cut(s) 1875
BbvI GCAGC 7 cut(s) 653, 788, 911, 967, 1069, 1352, 1569
BccI CCATC 6 cut(s) 75, 98, 538, 724, 832, 1147
BceAI ACGGC 1 cut(s) 1891
BcgI CGANNNNNNTGC 2 cut(s) 807, 841
BciT130I CCWGG 3 cut(s) 835, 1213, 1709
BciVI GTATCC 2 cut(s) 136, 697
BcoDI GTCTC 3 cut(s) 209, 776, 1212
BfaI CTAG 3 cut(s) 1124, 1202, 1373
BfmI CTRYAG 4 cut(s) 56, 1513, 2049, 2058
BfuAI ACCTGC 2 cut(s) 63, 541
BfuI GTATCC 2 cut(s) 136, 697
BglII AGATCT 1 cut(s) 1246
BisI GCNGC 8 cut(s) 642, 777, 900, 981, 1025, 1058, 1341, 1583
BlsI GCNGC 8 cut(s) 643, 778, 901, 982, 1026, 1059, 1342, 1584
Bme1390I CCNGG 3 cut(s) 835, 1213, 1709
Bme18I GGWCC 1 cut(s) 829
BmgBI CACGTC 1 cut(s) 1672
BmgT120I GGNCC 3 cut(s) 107, 829, 1904
BmiI GGNNCC 4 cut(s) 186, 490, 500, 831
BmrFI CCNGG 3 cut(s) 835, 1213, 1709
BmrI ACTGGG 2 cut(s) 190, 1645
BmsI GCATC 3 cut(s) 417, 668, 2044
BmuI ACTGGG 2 cut(s) 190, 1645
BpiI GAAGAC 3 cut(s) 282, 959, 1866
BpmI CTGGAG 1 cut(s) 1201
Bpu10I CCTNAGC 1 cut(s) 1875
BpuEI CTTGAG 1 cut(s) 2012
BsaI GGTCTC 1 cut(s) 209
BsaJI CCNNGG 6 cut(s) 110, 635, 833, 834, 1212, 1485
BsaXI ACNNNNNCTCC 2 cut(s) 1749, 1779
Bsc4I CCNNNNNNNGG 4 cut(s) 205, 355, 803, 1924
Bse1I ACTGG 7 cut(s) 86, 185, 235, 620, 774, 1184, 1640
Bse21I CCTNAGG 1 cut(s) 798
Bse3DI GCAATG 2 cut(s) 121, 1975
BseBI CCWGG 3 cut(s) 835, 1213, 1709
BseDI CCNNGG 6 cut(s) 110, 635, 833, 834, 1212, 1485
BseGI GGATG 4 cut(s) 13, 1165, 1258, 1900
BseLI CCNNNNNNNGG 4 cut(s) 205, 355, 803, 1924
BseMI GCAATG 2 cut(s) 121, 1975
BseMII CTCAG 6 cut(s) 411, 771, 789, 1328, 1761, 1889
BseNI ACTGG 7 cut(s) 86, 185, 235, 620, 774, 1184, 1640
BseRI GAGGAG 4 cut(s) 104, 164, 167, 227
BseXI GCAGC 7 cut(s) 653, 788, 911, 967, 1069, 1352, 1569
BseYI CCCAGC 1 cut(s) 1952
BsgI GTGCAG 3 cut(s) 569, 966, 1076
Bsh1285I CGRYCG 1 cut(s) 561
BshFI GGCC 4 cut(s) 85, 109, 1425, 1906
BsiEI CGRYCG 1 cut(s) 561
BslFI GGGAC 2 cut(s) 815, 1699
BslI CCNNNNNNNGG 4 cut(s) 205, 355, 803, 1924
BsmAI GTCTC 3 cut(s) 209, 776, 1212
BsmBI CGTCTC 1 cut(s) 776
BsmFI GGGAC 2 cut(s) 815, 1699
BsmI GAATGC 1 cut(s) 859
BsnI GGCC 4 cut(s) 85, 109, 1425, 1906
Bso31I GGTCTC 1 cut(s) 209
BspACI CCGC 2 cut(s) 1025, 1376
BspANI GGCC 4 cut(s) 85, 109, 1425, 1906
BspCNI CTCAG 6 cut(s) 412, 772, 790, 1327, 1762, 1888
BspLI GGNNCC 4 cut(s) 186, 490, 500, 831
BspMAI CTGCAG 2 cut(s) 60, 2053
BspMI ACCTGC 2 cut(s) 63, 541
BspPI GGATC 5 cut(s) 641, 940, 1719, 1823, 1909
BspTNI GGTCTC 1 cut(s) 209
BsrDI GCAATG 2 cut(s) 121, 1975
BsrI ACTGG 7 cut(s) 86, 185, 235, 620, 774, 1184, 1640
BssECI CCNNGG 6 cut(s) 110, 635, 833, 834, 1212, 1485
BssT1I CCWWGG 3 cut(s) 110, 635, 1485
Bst2UI CCWGG 3 cut(s) 835, 1213, 1709
Bst4CI ACNGT 6 cut(s) 379, 787, 850, 1464, 1751, 1901
Bst6I CTCTTC 2 cut(s) 204, 1233
BstC8I GCNNGC 3 cut(s) 196, 342, 1520
BstDEI CTNAG 6 cut(s) 420, 780, 798, 1314, 1770, 1875
BstEII GGTNACC 1 cut(s) 1207
BstENI CCTNNNNNAGG 1 cut(s) 801
BstF5I GGATG 4 cut(s) 13, 1165, 1258, 1900
BstMAI GTCTC 3 cut(s) 209, 776, 1212
BstMCI CGRYCG 1 cut(s) 561
BstMWI GCNNNNNNNGC 2 cut(s) 1349, 2048
BstNI CCWGG 3 cut(s) 835, 1213, 1709
BstNSI RCATGY 1 cut(s) 859
BstPI GGTNACC 1 cut(s) 1207
BstSCI CCNGG 3 cut(s) 833, 1211, 1707
BstSFI CTRYAG 4 cut(s) 56, 1513, 2049, 2058
BstV1I GCAGC 7 cut(s) 653, 788, 911, 967, 1069, 1352, 1569
BstV2I GAAGAC 3 cut(s) 282, 959, 1866
BstX2I RGATCY 4 cut(s) 646, 945, 1246, 1815
BstYI RGATCY 4 cut(s) 646, 945, 1246, 1815
Bsu36I CCTNAGG 1 cut(s) 798
BsuI GTATCC 2 cut(s) 136, 697
BsuRI GGCC 4 cut(s) 85, 109, 1425, 1906
BtrI CACGTC 1 cut(s) 1672
BtsCI GGATG 4 cut(s) 13, 1165, 1258, 1900
BtsI GCAGTG 3 cut(s) 523, 1192, 1529
BtsIMutI CAGTG 5 cut(s) 523, 1192, 1275, 1529, 1767
BveI ACCTGC 2 cut(s) 63, 541
Cac8I GCNNGC 3 cut(s) 196, 342, 1520
CaiI CAGNNNCTG 1 cut(s) 2057
Cfr13I GGNCC 3 cut(s) 107, 829, 1904
CseI GACGC 1 cut(s) 2014
Csp6I GTAC 2 cut(s) 821, 1096
CspCI CAANNNNNGTGG 2 cut(s) 1620, 1655
CviAII CATG 8 cut(s) 238, 856, 1101, 1222, 1427, 1570, 1924, 1975
CviQI GTAC 2 cut(s) 821, 1096
DdeI CTNAG 6 cut(s) 420, 780, 798, 1314, 1770, 1875
DraIII CACNNNGTG 2 cut(s) 1672, 1945
EaeI YGGCCR 1 cut(s) 83
Eam1104I CTCTTC 2 cut(s) 204, 1233
EarI CTCTTC 2 cut(s) 204, 1233
Eco130I CCWWGG 3 cut(s) 110, 635, 1485
Eco31I GGTCTC 1 cut(s) 209
Eco47I GGWCC 1 cut(s) 829
Eco57I CTGAAG 2 cut(s) 488, 971
Eco81I CCTNAGG 1 cut(s) 798
Eco91I GGTNACC 1 cut(s) 1207
EcoNI CCTNNNNNAGG 1 cut(s) 801
EcoO65I GGTNACC 1 cut(s) 1207
EcoRII CCWGG 3 cut(s) 833, 1211, 1707
EcoT14I CCWWGG 3 cut(s) 110, 635, 1485
EcoT22I ATGCAT 2 cut(s) 661, 861
ErhI CCWWGG 3 cut(s) 110, 635, 1485
Esp3I CGTCTC 1 cut(s) 776
FaeI CATG 8 cut(s) 241, 859, 1104, 1225, 1430, 1573, 1927, 1978
FalI AAGNNNNNCTT 2 cut(s) 1746, 1778
FaqI GGGAC 2 cut(s) 815, 1699
FatI CATG 8 cut(s) 237, 855, 1100, 1221, 1426, 1569, 1923, 1974
FauNDI CATATG 1 cut(s) 1171
FblI GTMKAC 2 cut(s) 557, 1176
Fnu4HI GCNGC 8 cut(s) 642, 777, 900, 981, 1025, 1058, 1341, 1583
FokI GGATG 4 cut(s) 20, 1172, 1265, 1907
Fsp4HI GCNGC 8 cut(s) 642, 777, 900, 981, 1025, 1058, 1341, 1583
FspBI CTAG 3 cut(s) 1124, 1202, 1373
GluI GCNGC 8 cut(s) 642, 777, 900, 981, 1025, 1058, 1341, 1583
GsaI CCCAGC 1 cut(s) 1956
GsuI CTGGAG 1 cut(s) 1201
HaeIII GGCC 4 cut(s) 85, 109, 1425, 1906
HgaI GACGC 1 cut(s) 2014
Hin1II CATG 8 cut(s) 241, 859, 1104, 1225, 1430, 1573, 1927, 1978
HincII GTYRAC 3 cut(s) 558, 625, 853
HindII GTYRAC 3 cut(s) 558, 625, 853
HinfI GANTC 4 cut(s) 73, 581, 679, 734
HphI GGTGA 6 cut(s) 296, 436, 1093, 1501, 1690, 1754
Hpy166II GTNNAC 7 cut(s) 558, 625, 853, 1098, 1177, 1567, 1939
Hpy188I TCNGA 8 cut(s) 72, 142, 468, 739, 1041, 1317, 1808, 1894
Hpy188III TCNNGA 9 cut(s) 77, 683, 868, 949, 1250, 1450, 1697, 1715, 1991
Hpy8I GTNNAC 7 cut(s) 558, 625, 853, 1098, 1177, 1567, 1939
Hpy99I CGWCG 2 cut(s) 1673, 2030
HpyAV CCTTC 6 cut(s) 901, 1285, 1385, 1588, 1669, 1803
HpyCH4III ACNGT 6 cut(s) 379, 787, 850, 1464, 1751, 1901
HpyCH4IV ACGT 1 cut(s) 1671
HpyF10VI GCNNNNNNNGC 2 cut(s) 1349, 2048
HpyF3I CTNAG 6 cut(s) 420, 780, 798, 1314, 1770, 1875
HpySE526I ACGT 1 cut(s) 1671
Hsp92II CATG 8 cut(s) 241, 859, 1104, 1225, 1430, 1573, 1927, 1978
LmnI GCTCC 6 cut(s) 43, 69, 154, 358, 1182, 2022
Lsp1109I GCAGC 7 cut(s) 653, 788, 911, 967, 1069, 1352, 1569
LweI GCATC 3 cut(s) 417, 668, 2044
MaeI CTAG 3 cut(s) 1124, 1202, 1373
MaeII ACGT 1 cut(s) 1671
MaeIII GTNAC 6 cut(s) 233, 373, 715, 1207, 1678, 1765
MflI RGATCY 4 cut(s) 646, 945, 1246, 1815
MlsI TGGCCA 1 cut(s) 85
MluCI AATT 6 cut(s) 393, 651, 1035, 1084, 1142, 1986
MluNI TGGCCA 1 cut(s) 85
MlyI GAGTC 1 cut(s) 688
MmeI TCCRAC 1 cut(s) 120
Mox20I TGGCCA 1 cut(s) 85
Mph1103I ATGCAT 2 cut(s) 661, 861
MscI TGGCCA 1 cut(s) 85
MseI TTAA 4 cut(s) 654, 1112, 1257, 1644
MslI CAYNNNNRTG 1 cut(s) 1280
Msp20I TGGCCA 1 cut(s) 85
MspA1I CMGCKG 2 cut(s) 779, 902
MspR9I CCNGG 3 cut(s) 835, 1213, 1709
Mva1269I GAATGC 1 cut(s) 859
MvaI CCWGG 3 cut(s) 835, 1213, 1709
MwoI GCNNNNNNNGC 2 cut(s) 1349, 2048
NdeI CATATG 1 cut(s) 1171
NlaIII CATG 8 cut(s) 241, 859, 1104, 1225, 1430, 1573, 1927, 1978
NlaIV GGNNCC 4 cut(s) 186, 490, 500, 831
NmuCI GTSAC 3 cut(s) 715, 1678, 1765
NsiI ATGCAT 2 cut(s) 661, 861
NspI RCATGY 1 cut(s) 859
PaqCI CACCTGC 1 cut(s) 541
PasI CCCWGGG 1 cut(s) 834
PctI GAATGC 1 cut(s) 859
PfeI GAWTC 3 cut(s) 73, 581, 734
PflMI CCANNNNNTGG 1 cut(s) 1924
PkrI GCNGC 8 cut(s) 643, 778, 901, 982, 1026, 1059, 1342, 1584
PleI GAGTC 1 cut(s) 687
PpsI GAGTC 1 cut(s) 687
PshBI ATTAAT 1 cut(s) 654
Psp6I CCWGG 3 cut(s) 833, 1211, 1707
PspEI GGTNACC 1 cut(s) 1207
PspFI CCCAGC 1 cut(s) 1952
PspGI CCWGG 3 cut(s) 833, 1211, 1707
PspN4I GGNNCC 4 cut(s) 186, 490, 500, 831
PspPI GGNCC 3 cut(s) 107, 829, 1904
PstI CTGCAG 2 cut(s) 60, 2053
PstNI CAGNNNCTG 1 cut(s) 2057
PsuI RGATCY 4 cut(s) 646, 945, 1246, 1815
PvuII CAGCTG 2 cut(s) 779, 902
RsaI GTAC 2 cut(s) 822, 1097
RsaNI GTAC 2 cut(s) 821, 1096
RseI CAYNNNNRTG 1 cut(s) 1280
SalI GTCGAC 1 cut(s) 556
SaqAI TTAA 4 cut(s) 654, 1112, 1257, 1644
SatI GCNGC 8 cut(s) 642, 777, 900, 981, 1025, 1058, 1341, 1583
Sau96I GGNCC 3 cut(s) 107, 829, 1904
SchI GAGTC 1 cut(s) 688
ScrFI CCNGG 3 cut(s) 835, 1213, 1709
SfaNI GCATC 3 cut(s) 417, 668, 2044
SfcI CTRYAG 4 cut(s) 56, 1513, 2049, 2058
SinI GGWCC 1 cut(s) 829
SmiMI CAYNNNNRTG 1 cut(s) 1280
SmlI CTYRAG 1 cut(s) 1991
SmoI CTYRAG 1 cut(s) 1991
Sse9I AATT 6 cut(s) 393, 651, 1035, 1084, 1142, 1986
SsiI CCGC 2 cut(s) 1025, 1376
SspI AATATT 2 cut(s) 1619, 1692
SspMI CTAG 3 cut(s) 1124, 1202, 1373
StyD4I CCNGG 3 cut(s) 833, 1211, 1707
StyI CCWWGG 3 cut(s) 110, 635, 1485
TaaI ACNGT 6 cut(s) 379, 787, 850, 1464, 1751, 1901
TaiI ACGT 1 cut(s) 1674
TaqI TCGA 8 cut(s) 35, 557, 761, 867, 1335, 1455, 1542, 2028
TaqII GACCGA 2 cut(s) 575, 817
TasI AATT 6 cut(s) 393, 651, 1035, 1084, 1142, 1986
TatI WGTACW 1 cut(s) 1095
TauI GCSGC 1 cut(s) 1027
TfiI GAWTC 3 cut(s) 73, 581, 734
Tru1I TTAA 4 cut(s) 654, 1112, 1257, 1644
Tru9I TTAA 4 cut(s) 654, 1112, 1257, 1644
TscAI CASTG 5 cut(s) 523, 1192, 1282, 1536, 1774
TseFI GTSAC 3 cut(s) 715, 1678, 1765
TseI GCWGC 7 cut(s) 641, 776, 899, 980, 1057, 1340, 1582
Tsp45I GTSAC 3 cut(s) 715, 1678, 1765
TspDTI ATGAA 8 cut(s) 254, 326, 975, 1238, 1313, 1586, 1651, 1912
TspGWI ACGGA 2 cut(s) 161, 1956
TspRI CASTG 5 cut(s) 523, 1192, 1282, 1536, 1774
Van91I CCANNNNNTGG 1 cut(s) 1924
VpaK11BI GGWCC 1 cut(s) 829
VspI ATTAAT 1 cut(s) 654
XagI CCTNNNNNAGG 1 cut(s) 801
XapI RAATTY 1 cut(s) 1035
XceI RCATGY 1 cut(s) 859
XcmI CCANNNNNNNNNTGG 1 cut(s) 1596
XmiI GTMKAC 2 cut(s) 557, 1176
XspI CTAG 3 cut(s) 1124, 1202, 1373
Zsp2I ATGCAT 2 cut(s) 661, 861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.