Plant mobile domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 111 - 321 | 1.2e-12 | Plant mobile domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 453 |
| AccI | GTMKAC | 1 cut(s) | 983 |
| AciI | CCGC | 1 cut(s) | 961 |
| AclWI | GGATC | 1 cut(s) | 652 |
| AcoI | YGGCCR | 1 cut(s) | 524 |
| AcsI | RAATTY | 2 cut(s) | 154, 1001 |
| AcuI | CTGAAG | 2 cut(s) | 447, 673 |
| AcyI | GRCGYC | 1 cut(s) | 450 |
| AfaI | GTAC | 1 cut(s) | 972 |
| AgsI | TTSAA | 7 cut(s) | 149, 319, 371, 499, 545, 746, 793 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 344, 376 |
| AluBI | AGCT | 5 cut(s) | 68, 331, 586, 610, 650 |
| AluI | AGCT | 5 cut(s) | 68, 331, 586, 610, 650 |
| Alw21I | GWGCWC | 2 cut(s) | 214, 920 |
| Alw26I | GTCTC | 3 cut(s) | 334, 584, 905 |
| AlwI | GGATC | 1 cut(s) | 652 |
| Ama87I | CYCGRG | 2 cut(s) | 620, 992 |
| AoxI | GGCC | 3 cut(s) | 282, 524, 578 |
| ApeKI | GCWGC | 2 cut(s) | 65, 199 |
| ApoI | RAATTY | 2 cut(s) | 154, 1001 |
| AspS9I | GGNCC | 3 cut(s) | 92, 193, 283 |
| AvaI | CYCGRG | 2 cut(s) | 620, 992 |
| AvaII | GGWCC | 2 cut(s) | 92, 193 |
| BalI | TGGCCA | 1 cut(s) | 526 |
| BbsI | GAAGAC | 1 cut(s) | 884 |
| Bbv12I | GWGCWC | 2 cut(s) | 214, 920 |
| BbvI | GCAGC | 2 cut(s) | 77, 211 |
| BccI | CCATC | 3 cut(s) | 769, 791, 930 |
| BciVI | GTATCC | 1 cut(s) | 295 |
| BcoDI | GTCTC | 3 cut(s) | 334, 584, 905 |
| BfaI | CTAG | 1 cut(s) | 903 |
| BfuI | GTATCC | 1 cut(s) | 295 |
| BisI | GCNGC | 2 cut(s) | 66, 200 |
| BlpI | GCTNAGC | 1 cut(s) | 606 |
| BlsI | GCNGC | 2 cut(s) | 67, 201 |
| Bme18I | GGWCC | 2 cut(s) | 92, 193 |
| BmeT110I | CYCGRG | 2 cut(s) | 620, 992 |
| BmgT120I | GGNCC | 3 cut(s) | 92, 193, 283 |
| BmiI | GGNNCC | 1 cut(s) | 93 |
| BmrI | ACTGGG | 1 cut(s) | 724 |
| BmsI | GCATC | 5 cut(s) | 163, 225, 625, 833, 951 |
| BmuI | ACTGGG | 1 cut(s) | 724 |
| BoxI | GACNNNNGTC | 1 cut(s) | 884 |
| BpiI | GAAGAC | 1 cut(s) | 884 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 606 |
| BpuEI | CTTGAG | 2 cut(s) | 608, 893 |
| BsaAI | YACGTR | 1 cut(s) | 229 |
| BsaBI | GATNNNNATC | 1 cut(s) | 728 |
| BsaHI | GRCGYC | 1 cut(s) | 450 |
| BsaJI | CCNNGG | 3 cut(s) | 512, 561, 923 |
| Bse1I | ACTGG | 2 cut(s) | 719, 770 |
| Bse8I | GATNNNNATC | 1 cut(s) | 728 |
| BseDI | CCNNGG | 3 cut(s) | 512, 561, 923 |
| BseGI | GGATG | 3 cut(s) | 802, 848, 973 |
| BseJI | GATNNNNATC | 1 cut(s) | 728 |
| BseMII | CTCAG | 2 cut(s) | 585, 597 |
| BseNI | ACTGG | 2 cut(s) | 719, 770 |
| BseXI | GCAGC | 2 cut(s) | 77, 211 |
| BshFI | GGCC | 3 cut(s) | 284, 526, 580 |
| BsiHKAI | GWGCWC | 2 cut(s) | 214, 920 |
| BsiHKCI | CYCGRG | 2 cut(s) | 620, 992 |
| BslFI | GGGAC | 1 cut(s) | 105 |
| BsmAI | GTCTC | 3 cut(s) | 334, 584, 905 |
| BsmBI | CGTCTC | 1 cut(s) | 905 |
| BsmFI | GGGAC | 1 cut(s) | 105 |
| BsmI | GAATGC | 1 cut(s) | 846 |
| BsnI | GGCC | 3 cut(s) | 284, 526, 580 |
| BsoBI | CYCGRG | 2 cut(s) | 620, 992 |
| Bsp1286I | GDGCHC | 2 cut(s) | 214, 920 |
| Bsp1407I | TGTACA | 1 cut(s) | 970 |
| Bsp143I | GATC | 3 cut(s) | 435, 657, 695 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 606 |
| BspACI | CCGC | 1 cut(s) | 961 |
| BspANI | GGCC | 3 cut(s) | 284, 526, 580 |
| BspCNI | CTCAG | 2 cut(s) | 586, 598 |
| BspLI | GGNNCC | 1 cut(s) | 93 |
| BspPI | GGATC | 1 cut(s) | 652 |
| BspQI | GCTCTTC | 1 cut(s) | 219 |
| BsrGI | TGTACA | 1 cut(s) | 970 |
| BsrI | ACTGG | 2 cut(s) | 719, 770 |
| BssECI | CCNNGG | 3 cut(s) | 512, 561, 923 |
| BssMI | GATC | 3 cut(s) | 435, 657, 695 |
| BssNI | GRCGYC | 1 cut(s) | 450 |
| BssT1I | CCWWGG | 2 cut(s) | 561, 923 |
| Bst4CI | ACNGT | 2 cut(s) | 442, 839 |
| Bst6I | CTCTTC | 1 cut(s) | 219 |
| BstACI | GRCGYC | 1 cut(s) | 450 |
| BstAUI | TGTACA | 1 cut(s) | 970 |
| BstBAI | YACGTR | 1 cut(s) | 229 |
| BstC8I | GCNNGC | 3 cut(s) | 70, 282, 675 |
| BstDEI | CTNAG | 3 cut(s) | 336, 594, 606 |
| BstF5I | GGATG | 3 cut(s) | 802, 848, 973 |
| BstKTI | GATC | 3 cut(s) | 438, 660, 698 |
| BstMAI | GTCTC | 3 cut(s) | 334, 584, 905 |
| BstMBI | GATC | 3 cut(s) | 435, 657, 695 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 616 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 884 |
| BstSNI | TACGTA | 1 cut(s) | 229 |
| BstV1I | GCAGC | 2 cut(s) | 77, 211 |
| BstV2I | GAAGAC | 1 cut(s) | 884 |
| BsuI | GTATCC | 1 cut(s) | 295 |
| BsuRI | GGCC | 3 cut(s) | 284, 526, 580 |
| BtsCI | GGATG | 3 cut(s) | 802, 848, 973 |
| BtsI | GCAGTG | 2 cut(s) | 25, 684 |
| BtsIMutI | CAGTG | 3 cut(s) | 25, 684, 844 |
| Cac8I | GCNNGC | 3 cut(s) | 70, 282, 675 |
| Cfr13I | GGNCC | 3 cut(s) | 92, 193, 283 |
| Csp6I | GTAC | 1 cut(s) | 971 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 251, 286 |
| CviAII | CATG | 1 cut(s) | 53 |
| CviQI | GTAC | 1 cut(s) | 971 |
| DdeI | CTNAG | 3 cut(s) | 336, 594, 606 |
| DpnI | GATC | 3 cut(s) | 437, 659, 697 |
| DpnII | GATC | 3 cut(s) | 435, 657, 695 |
| EaeI | YGGCCR | 1 cut(s) | 524 |
| Eam1104I | CTCTTC | 1 cut(s) | 219 |
| EarI | CTCTTC | 1 cut(s) | 219 |
| Eco105I | TACGTA | 1 cut(s) | 229 |
| Eco130I | CCWWGG | 2 cut(s) | 561, 923 |
| Eco32I | GATATC | 1 cut(s) | 558 |
| Eco47I | GGWCC | 2 cut(s) | 92, 193 |
| Eco57I | CTGAAG | 2 cut(s) | 447, 673 |
| Eco88I | CYCGRG | 2 cut(s) | 620, 992 |
| EcoRV | GATATC | 1 cut(s) | 558 |
| EcoT14I | CCWWGG | 2 cut(s) | 561, 923 |
| EcoT22I | ATGCAT | 1 cut(s) | 848 |
| ErhI | CCWWGG | 2 cut(s) | 561, 923 |
| Esp3I | CGTCTC | 1 cut(s) | 905 |
| FaeI | CATG | 1 cut(s) | 56 |
| FaiI | YATR | 5 cut(s) | 54, 377, 470, 835, 1008 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 398, 430, 971, 1003 |
| FaqI | GGGAC | 1 cut(s) | 105 |
| FatI | CATG | 1 cut(s) | 52 |
| FblI | GTMKAC | 1 cut(s) | 983 |
| Fnu4HI | GCNGC | 2 cut(s) | 66, 200 |
| FokI | GGATG | 3 cut(s) | 809, 855, 980 |
| Fsp4HI | GCNGC | 2 cut(s) | 66, 200 |
| FspBI | CTAG | 1 cut(s) | 903 |
| GluI | GCNGC | 2 cut(s) | 66, 200 |
| HaeIII | GGCC | 3 cut(s) | 284, 526, 580 |
| Hin1I | GRCGYC | 1 cut(s) | 450 |
| Hin1II | CATG | 1 cut(s) | 56 |
| HinfI | GANTC | 2 cut(s) | 530, 628 |
| Hpy166II | GTNNAC | 1 cut(s) | 984 |
| Hpy188I | TCNGA | 4 cut(s) | 160, 513, 890, 935 |
| Hpy8I | GTNNAC | 1 cut(s) | 984 |
| HpyAV | CCTTC | 1 cut(s) | 787 |
| HpyCH4III | ACNGT | 2 cut(s) | 442, 839 |
| HpyCH4IV | ACGT | 2 cut(s) | 228, 450 |
| HpyCH4V | TGCA | 5 cut(s) | 176, 238, 638, 677, 846 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 616 |
| HpyF3I | CTNAG | 3 cut(s) | 336, 594, 606 |
| HpySE526I | ACGT | 2 cut(s) | 228, 450 |
| Hsp92I | GRCGYC | 1 cut(s) | 450 |
| Hsp92II | CATG | 1 cut(s) | 56 |
| Kzo9I | GATC | 3 cut(s) | 435, 657, 695 |
| LguI | GCTCTTC | 1 cut(s) | 219 |
| LmnI | GCTCC | 1 cut(s) | 939 |
| Lsp1109I | GCAGC | 2 cut(s) | 77, 211 |
| LweI | GCATC | 5 cut(s) | 163, 225, 625, 833, 951 |
| MaeI | CTAG | 1 cut(s) | 903 |
| MaeII | ACGT | 2 cut(s) | 228, 450 |
| MalI | GATC | 3 cut(s) | 437, 659, 697 |
| MboI | GATC | 3 cut(s) | 435, 657, 695 |
| MfeI | CAATTG | 1 cut(s) | 306 |
| MhlI | GDGCHC | 2 cut(s) | 214, 920 |
| MlsI | TGGCCA | 1 cut(s) | 526 |
| MluCI | AATT | 4 cut(s) | 154, 306, 750, 1001 |
| MluNI | TGGCCA | 1 cut(s) | 526 |
| MlyI | GAGTC | 1 cut(s) | 524 |
| MmeI | TCCRAC | 2 cut(s) | 162, 342 |
| MnlI | CCTC | 7 cut(s) | 49, 270, 478, 507, 519, 570, 988 |
| Mox20I | TGGCCA | 1 cut(s) | 526 |
| Mph1103I | ATGCAT | 1 cut(s) | 848 |
| MscI | TGGCCA | 1 cut(s) | 526 |
| MseI | TTAA | 2 cut(s) | 612, 753 |
| Msp20I | TGGCCA | 1 cut(s) | 526 |
| MspA1I | CMGCKG | 1 cut(s) | 68 |
| MunI | CAATTG | 1 cut(s) | 306 |
| Mva1269I | GAATGC | 1 cut(s) | 846 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 616 |
| NdeII | GATC | 3 cut(s) | 435, 657, 695 |
| NlaIII | CATG | 1 cut(s) | 56 |
| NlaIV | GGNNCC | 1 cut(s) | 93 |
| NsiI | ATGCAT | 1 cut(s) | 848 |
| PaeR7I | CTCGAG | 1 cut(s) | 992 |
| PciSI | GCTCTTC | 1 cut(s) | 219 |
| PctI | GAATGC | 1 cut(s) | 846 |
| PfeI | GAWTC | 1 cut(s) | 628 |
| PkrI | GCNGC | 2 cut(s) | 67, 201 |
| PleI | GAGTC | 1 cut(s) | 524 |
| PpsI | GAGTC | 1 cut(s) | 524 |
| Ppu21I | YACGTR | 1 cut(s) | 229 |
| PshAI | GACNNNNGTC | 1 cut(s) | 884 |
| PspN4I | GGNNCC | 1 cut(s) | 93 |
| PspPI | GGNCC | 3 cut(s) | 92, 193, 283 |
| PvuII | CAGCTG | 1 cut(s) | 68 |
| RsaI | GTAC | 1 cut(s) | 972 |
| RsaNI | GTAC | 1 cut(s) | 971 |
| SapI | GCTCTTC | 1 cut(s) | 219 |
| SaqAI | TTAA | 2 cut(s) | 612, 753 |
| SatI | GCNGC | 2 cut(s) | 66, 200 |
| Sau3AI | GATC | 3 cut(s) | 435, 657, 695 |
| Sau96I | GGNCC | 3 cut(s) | 92, 193, 283 |
| SchI | GAGTC | 1 cut(s) | 524 |
| SduI | GDGCHC | 2 cut(s) | 214, 920 |
| SfaNI | GCATC | 5 cut(s) | 163, 225, 625, 833, 951 |
| Sfr274I | CTCGAG | 1 cut(s) | 992 |
| SinI | GGWCC | 2 cut(s) | 92, 193 |
| SlaI | CTCGAG | 1 cut(s) | 992 |
| SmlI | CTYRAG | 3 cut(s) | 587, 872, 992 |
| SmoI | CTYRAG | 3 cut(s) | 587, 872, 992 |
| SnaBI | TACGTA | 1 cut(s) | 229 |
| Sse9I | AATT | 4 cut(s) | 154, 306, 750, 1001 |
| SsiI | CCGC | 1 cut(s) | 961 |
| SspI | AATATT | 2 cut(s) | 539, 954 |
| SspMI | CTAG | 1 cut(s) | 903 |
| StyI | CCWWGG | 2 cut(s) | 561, 923 |
| TaaI | ACNGT | 2 cut(s) | 442, 839 |
| TaiI | ACGT | 2 cut(s) | 231, 453 |
| TaqI | TCGA | 2 cut(s) | 698, 993 |
| TasI | AATT | 4 cut(s) | 154, 306, 750, 1001 |
| TatI | WGTACW | 1 cut(s) | 970 |
| TfiI | GAWTC | 1 cut(s) | 628 |
| Tru1I | TTAA | 2 cut(s) | 612, 753 |
| Tru9I | TTAA | 2 cut(s) | 612, 753 |
| TscAI | CASTG | 3 cut(s) | 25, 684, 844 |
| TseI | GCWGC | 2 cut(s) | 65, 199 |
| TspDTI | ATGAA | 4 cut(s) | 42, 206, 395, 400 |
| TspRI | CASTG | 3 cut(s) | 25, 684, 844 |
| VpaK11BI | GGWCC | 2 cut(s) | 92, 193 |
| XapI | RAATTY | 2 cut(s) | 154, 1001 |
| XhoI | CTCGAG | 1 cut(s) | 992 |
| XmiI | GTMKAC | 1 cut(s) | 983 |
| XspI | CTAG | 1 cut(s) | 903 |
| ZraI | GACGTC | 1 cut(s) | 451 |
| Zsp2I | ATGCAT | 1 cut(s) | 848 |